Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12o12r
         (471 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   0.54 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   3.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   6.7  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -1

Query: 375 TKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIA 232
           T + K+I K   P + ++I     V ++   DH    L+D   +  IA
Sbjct: 124 TMENKDITKRPLPNESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIA 171


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +1

Query: 106 VIELQVLFVFGGHDLEVYSVVFQHGGKLPGD 198
           VI +  + V    +L+  +V+F+HG ++P +
Sbjct: 3   VIAILAMVVGVQAELKQINVIFRHGDRIPDE 33


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = +1

Query: 145 DLEVYSVVFQHGGKLPGD 198
           +L+  +V+F+HG ++P +
Sbjct: 1   ELKQINVIFRHGDRIPDE 18


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 301 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQE 200
           Q H+Q+      V    +PQQ   +  Q+Q QQ+
Sbjct: 422 QQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQ 455


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 468 EGKEGRGXKEAVKRL 424
           E ++GRG  EA KRL
Sbjct: 288 EEEDGRGQSEAEKRL 302


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 169 KQQSILQDHVHRRQTVPEAR 110
           + Q ++Q HV    T+PE +
Sbjct: 386 RNQDVVQTHVLTIHTIPEVK 405


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,656
Number of Sequences: 438
Number of extensions: 2492
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)