Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12o11r
(788 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104759-1|AAI04760.1| 571|Homo sapiens ZNF181 protein protein. 34 0.51
BC043228-1|AAH43228.1| 507|Homo sapiens zinc finger protein 181... 34 0.51
BC024176-1|AAH24176.1| 399|Homo sapiens ZNF302 protein protein. 33 1.2
AK074901-1|BAC11279.1| 399|Homo sapiens protein ( Homo sapiens ... 33 1.2
AF326206-1|AAK11224.1| 399|Homo sapiens ZNF140-like transcripti... 33 1.2
AF265236-1|AAF74775.1| 478|Homo sapiens ZNF135-like protein pro... 33 1.2
AF155656-1|AAF67475.1| 411|Homo sapiens zinc finger protein ZNF... 33 1.2
BC109062-1|AAI09063.2| 426|Homo sapiens ZNF562 protein protein. 32 2.7
AY346375-1|AAQ54330.1| 426|Homo sapiens hypothetical protein FL... 32 2.7
AK000086-1|BAA90935.1| 354|Homo sapiens protein ( Homo sapiens ... 32 2.7
BC125099-1|AAI25100.1| 781|Homo sapiens zinc finger protein 616... 31 3.6
BC033199-1|AAH33199.1| 781|Homo sapiens zinc finger protein 616... 31 3.6
BC139904-1|AAI39905.1| 215|Homo sapiens FLJ45422 protein protein. 30 8.3
AK127349-1|BAC86939.1| 215|Homo sapiens protein ( Homo sapiens ... 30 8.3
>BC104759-1|AAI04760.1| 571|Homo sapiens ZNF181 protein protein.
Length = 571
Score = 34.3 bits (75), Expect = 0.51
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 284 GAARGRN*ILSKHSRGRTGKPPGQV*ECGSRVTTAHQASRELVDMSG 144
G A G+ IL++H R TG+ P + ECG + +R L+ SG
Sbjct: 243 GKAFGKQSILNRHWRIHTGEKPYECRECGKTFSHGSSLTRHLISHSG 289
>BC043228-1|AAH43228.1| 507|Homo sapiens zinc finger protein 181
protein.
Length = 507
Score = 34.3 bits (75), Expect = 0.51
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 284 GAARGRN*ILSKHSRGRTGKPPGQV*ECGSRVTTAHQASRELVDMSG 144
G A G+ IL++H R TG+ P + ECG + +R L+ SG
Sbjct: 179 GKAFGKQSILNRHWRIHTGEKPYECRECGKTFSHGSSLTRHLISHSG 225
>BC024176-1|AAH24176.1| 399|Homo sapiens ZNF302 protein protein.
Length = 399
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 284 GAARGRN*ILSKHSRGRTGKPPGQV*ECGSRVTTAHQASRELVDMSG 144
G A G+ ILS+H R TG+ P + ECG + +R + SG
Sbjct: 207 GKAFGKQSILSRHWRIHTGEKPYECRECGKTFSHGSSLTRHQISHSG 253
>AK074901-1|BAC11279.1| 399|Homo sapiens protein ( Homo sapiens
cDNA FLJ90420 fis, clone NT2RP3000232, weakly similar to
ZINC FINGER PROTEIN 184. ).
Length = 399
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 284 GAARGRN*ILSKHSRGRTGKPPGQV*ECGSRVTTAHQASRELVDMSG 144
G A G+ ILS+H R TG+ P + ECG + +R + SG
Sbjct: 207 GKAFGKQSILSRHWRIHTGEKPYECRECGKTFSHGSSLTRHQISHSG 253
>AF326206-1|AAK11224.1| 399|Homo sapiens ZNF140-like transcription
factor protein.
Length = 399
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 284 GAARGRN*ILSKHSRGRTGKPPGQV*ECGSRVTTAHQASRELVDMSG 144
G A G+ ILS+H R TG+ P + ECG + +R + SG
Sbjct: 207 GKAFGKQSILSRHWRIHTGEKPYECRECGKTFSHGSSLTRHQISHSG 253
>AF265236-1|AAF74775.1| 478|Homo sapiens ZNF135-like protein
protein.
Length = 478
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 284 GAARGRN*ILSKHSRGRTGKPPGQV*ECGSRVTTAHQASRELVDMSG 144
G A G+ ILS+H R TG+ P + ECG + +R + SG
Sbjct: 286 GKAFGKQSILSRHWRIHTGEKPYECRECGKTFSHGSSLTRHQISHSG 332
>AF155656-1|AAF67475.1| 411|Homo sapiens zinc finger protein
ZNF140-like protein protein.
Length = 411
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 284 GAARGRN*ILSKHSRGRTGKPPGQV*ECGSRVTTAHQASRELVDMSG 144
G A G+ ILS+H R TG+ P + ECG + +R + SG
Sbjct: 207 GKAFGKQSILSRHWRIHTGEKPYECRECGKTFSHGSSLTRHQISHSG 253
>BC109062-1|AAI09063.2| 426|Homo sapiens ZNF562 protein protein.
Length = 426
Score = 31.9 bits (69), Expect = 2.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 284 GAARGRN*ILSKHSRGRTGKPPGQV*ECGSRVTTAHQASRELVDMSG 144
G A R+ L++H R TG+ P + ECG T+ S+ L SG
Sbjct: 378 GKAFNRSSTLTQHRRIHTGEKPYECVECGKTFITSSHRSKHLKTHSG 424
>AY346375-1|AAQ54330.1| 426|Homo sapiens hypothetical protein
FLJ20079 protein.
Length = 426
Score = 31.9 bits (69), Expect = 2.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 284 GAARGRN*ILSKHSRGRTGKPPGQV*ECGSRVTTAHQASRELVDMSG 144
G A R+ L++H R TG+ P + ECG T+ S+ L SG
Sbjct: 378 GKAFNRSSTLTQHRRIHTGEKPYECVECGKTFITSSHRSKHLKTHSG 424
>AK000086-1|BAA90935.1| 354|Homo sapiens protein ( Homo sapiens
cDNA FLJ20079 fis, clone COL03057. ).
Length = 354
Score = 31.9 bits (69), Expect = 2.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 284 GAARGRN*ILSKHSRGRTGKPPGQV*ECGSRVTTAHQASRELVDMSG 144
G A R+ L++H R TG+ P + ECG T+ S+ L SG
Sbjct: 306 GRAFNRSSTLTQHRRIHTGEKPYECVECGKTFITSSHRSKHLKTHSG 352
>BC125099-1|AAI25100.1| 781|Homo sapiens zinc finger protein 616
protein.
Length = 781
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -1
Query: 284 GAARGRN*ILSKHSRGRTGKPPGQV*ECGSRVTTAHQASRELVDMSGSTNPTSMTVS 114
G A GR LSKH R +GK P + ECG ++ + +G + T + V+
Sbjct: 723 GKAFGRLFSLSKHQRIHSGKKPYKCNECGKSFICRSGLTKHRIRHTGESLTTKLNVT 779
>BC033199-1|AAH33199.1| 781|Homo sapiens zinc finger protein 616
protein.
Length = 781
Score = 31.5 bits (68), Expect = 3.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -1
Query: 284 GAARGRN*ILSKHSRGRTGKPPGQV*ECGSRVTTAHQASRELVDMSGSTNPTSMTVS 114
G A GR LSKH R +GK P + ECG ++ + +G + T + V+
Sbjct: 723 GKAFGRLFSLSKHQRIHSGKKPYKCNECGKSFICRSGLTKHRIRHTGESLTTKLNVT 779
>BC139904-1|AAI39905.1| 215|Homo sapiens FLJ45422 protein protein.
Length = 215
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 155 RRAHGSLDAQWLRGSHTPTPDRAACQCDPGCVYLRFSFGREPRRCARGQRHPL 313
+++ GS AQ+ SH + AC C CV + FS G A G P+
Sbjct: 146 KKSSGSNCAQYSDASHDTCKEDYACSCSGVCVLISFSPGCPSSLTAAGVIFPV 198
>AK127349-1|BAC86939.1| 215|Homo sapiens protein ( Homo sapiens
cDNA FLJ45422 fis, clone BRHIP3036715, moderately
similar to HLA class I histocompatibility antigen, alpha
chain H ).
Length = 215
Score = 30.3 bits (65), Expect = 8.3
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 155 RRAHGSLDAQWLRGSHTPTPDRAACQCDPGCVYLRFSFGREPRRCARGQRHPL 313
+++ GS AQ+ SH + AC C CV + FS G A G P+
Sbjct: 146 KKSSGSNCAQYSDASHDTCKEDYACSCSGVCVLISFSPGCPSSLTAAGVIFPV 198
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,409,841
Number of Sequences: 237096
Number of extensions: 1879714
Number of successful extensions: 10528
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10508
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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