Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12o11r
         (788 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069375-1|AAL39520.1|  216|Drosophila melanogaster LD08152p pro...    30   3.1  
AE014297-4389|AAS65224.1|  462|Drosophila melanogaster CG2304-PC...    30   3.1  
AE014297-4388|AAS65223.1|  809|Drosophila melanogaster CG2304-PD...    30   3.1  
AE014297-4387|AAN14174.1|  804|Drosophila melanogaster CG2304-PB...    30   3.1  
AE014297-4386|AAF56900.1|  804|Drosophila melanogaster CG2304-PA...    30   3.1  
BT001260-1|AAN71016.1|  462|Drosophila melanogaster AT02461p pro...    30   4.1  
AY122250-1|AAM52762.1|  804|Drosophila melanogaster SD05665p pro...    30   4.1  
AF387786-1|AAL57300.1|  809|Drosophila melanogaster TRC8 protein.      30   4.1  

>AY069375-1|AAL39520.1|  216|Drosophila melanogaster LD08152p
           protein.
          Length = 216

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 206 ECGSRVTTAHQASR-ELVDMSGSTNPTSMTVSGQHPPSSAASCAGM 72
           E  S V+ A  +S    +  SGS++ + MT S Q PP +A S A +
Sbjct: 152 EARSLVSVASSSSATHRISASGSSDSSYMTASAQSPPPTATSAAAV 197


>AE014297-4389|AAS65224.1|  462|Drosophila melanogaster CG2304-PC,
           isoform C protein.
          Length = 462

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 206 ECGSRVTTAHQASR-ELVDMSGSTNPTSMTVSGQHPPSSAASCAGM 72
           E  S V+ A  +S    +  SGS++ + MT S Q PP +A S A +
Sbjct: 398 EARSLVSVASSSSATHRISASGSSDSSYMTASAQSPPPTATSAAAV 443


>AE014297-4388|AAS65223.1|  809|Drosophila melanogaster CG2304-PD,
           isoform D protein.
          Length = 809

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 206 ECGSRVTTAHQASR-ELVDMSGSTNPTSMTVSGQHPPSSAASCAGM 72
           E  S V+ A  +S    +  SGS++ + MT S Q PP +A S A +
Sbjct: 745 EARSLVSVASSSSATHRISASGSSDSSYMTASAQSPPPTATSAAAV 790


>AE014297-4387|AAN14174.1|  804|Drosophila melanogaster CG2304-PB,
           isoform B protein.
          Length = 804

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 206 ECGSRVTTAHQASR-ELVDMSGSTNPTSMTVSGQHPPSSAASCAGM 72
           E  S V+ A  +S    +  SGS++ + MT S Q PP +A S A +
Sbjct: 740 EARSLVSVASSSSATHRISASGSSDSSYMTASAQSPPPTATSAAAV 785


>AE014297-4386|AAF56900.1|  804|Drosophila melanogaster CG2304-PA,
           isoform A protein.
          Length = 804

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 206 ECGSRVTTAHQASR-ELVDMSGSTNPTSMTVSGQHPPSSAASCAGM 72
           E  S V+ A  +S    +  SGS++ + MT S Q PP +A S A +
Sbjct: 740 EARSLVSVASSSSATHRISASGSSDSSYMTASAQSPPPTATSAAAV 785


>BT001260-1|AAN71016.1|  462|Drosophila melanogaster AT02461p
           protein.
          Length = 462

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 206 ECGSRVTTAHQASR-ELVDMSGSTNPTSMTVSGQHPPSSAASCAGM 72
           E  S V+ A  +S    +  SGS++ + MT S Q PP +A S A +
Sbjct: 398 EARSLVSVASSSSATHRISASGSSDSSYMTASAQPPPPTATSAAAV 443


>AY122250-1|AAM52762.1|  804|Drosophila melanogaster SD05665p
           protein.
          Length = 804

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 206 ECGSRVTTAHQASR-ELVDMSGSTNPTSMTVSGQHPPSSAASCAGM 72
           E  S V+ A  +S    +  SGS++ + MT S Q PP +A S A +
Sbjct: 740 EARSLVSVASSSSATHRISASGSSDSSYMTASAQPPPPTATSAAAV 785


>AF387786-1|AAL57300.1|  809|Drosophila melanogaster TRC8 protein.
          Length = 809

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 206 ECGSRVTTAHQASR-ELVDMSGSTNPTSMTVSGQHPPSSAASCAGM 72
           E  S V+ A  +S    +  SGS++ + MT S Q PP +A S A +
Sbjct: 745 EARSLVSVASSSSATHRISASGSSDSSYMTASAQPPPPTATSAAAV 790


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,180,758
Number of Sequences: 53049
Number of extensions: 610734
Number of successful extensions: 1776
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1776
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)