Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12o11f
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   1.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   7.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   7.5  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   7.5  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   7.5  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   7.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.9  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 447 CTGTASRDKRNLRDCSPAECHGSPEAGRSGS 539
           CT   +  KR+L D    EC    E  ++GS
Sbjct: 56  CTPDGAELKRHLPDALHTECSKCSETQKNGS 86


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 388 STAYYYGDLEKLKRQKPLEDVPEQR 462
           +T+YY  DLEK ++Q      P +R
Sbjct: 473 ATSYYAKDLEKQRQQCNQNKCPVKR 497



 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 477 NLRDCSPAECHGS 515
           N+ DC P  CH +
Sbjct: 260 NVDDCRPGACHNN 272


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 236 CGLSQTTN*TLKGHTRKHS 180
           CG S     TLK H R HS
Sbjct: 255 CGKSYARPSTLKTHLRTHS 273


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 465 LTLFRYILEWFLPF 424
           LT+ RY   W+LPF
Sbjct: 268 LTVPRYQAWWYLPF 281


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 465 LTLFRYILEWFLPF 424
           LT+ RY   W+LPF
Sbjct: 268 LTVPRYQAWWYLPF 281


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 465 LTLFRYILEWFLPF 424
           LT+ RY   W+LPF
Sbjct: 268 LTVPRYQAWWYLPF 281


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 465 LTLFRYILEWFLPF 424
           LT+ RY   W+LPF
Sbjct: 268 LTVPRYQAWWYLPF 281


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 465 LTLFRYILEWFLPF 424
           LT+ RY   W+LPF
Sbjct: 268 LTVPRYQAWWYLPF 281


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 341 YEPWTEPE 364
           +EPWT PE
Sbjct: 458 HEPWTAPE 465


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,115
Number of Sequences: 336
Number of extensions: 3121
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)