Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12o09r
(745 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U38238-1|AAA97864.1| 1113|Drosophila melanogaster HLH106 protein. 176 2e-44
BT010285-1|AAQ23603.1| 1113|Drosophila melanogaster LP12374p pro... 176 2e-44
AE014296-3210|AAN11632.1| 1113|Drosophila melanogaster CG8522-PC... 176 2e-44
AE014296-3209|AAN11631.1| 1113|Drosophila melanogaster CG8522-PB... 176 2e-44
AE014296-3208|AAF49115.1| 1113|Drosophila melanogaster CG8522-PA... 176 2e-44
AY051627-1|AAK93051.1| 517|Drosophila melanogaster GH27756p pro... 29 6.7
AE014298-2517|AAF48693.1| 517|Drosophila melanogaster CG4955-PA... 29 6.7
>U38238-1|AAA97864.1| 1113|Drosophila melanogaster HLH106 protein.
Length = 1113
Score = 176 bits (429), Expect = 2e-44
Identities = 96/232 (41%), Positives = 141/232 (60%), Gaps = 7/232 (3%)
Frame = -1
Query: 742 LPGALHMAYKSRRGLYSLAQCRDERSVERTSETILKV-CDLAGARLADSLAYYCCRKPTQ 566
LP ALH +++ L + +++++ + ++ + CD + L + L
Sbjct: 878 LPKALHAVLRAKMILLK----NNGNALDKSLKQLVNILCDESSVELQECLTVNRITDAKG 933
Query: 565 LMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----PHQQLRAFQRDLHSLRRLSQSLPW 398
+ +L Q+L CDW+LE R +WE P + L FQ DL+SLR + +++P
Sbjct: 934 IKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVPGEVLEKFQTDLNSLRNIVENIPN 993
Query: 397 VTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNRASIICG-KERALEGG-GGDGERA 224
SR++L AVCR+MAGA+P TQQLLD SLR R +SI CG K+R + GG+ ERA
Sbjct: 994 AQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAHSSIFCGSKDRRQQNFVGGERERA 1053
Query: 223 VALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGHRSRLPHCYNLMKSFG 68
A+Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G + +L CY LMKS G
Sbjct: 1054 SAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVGDKRKLKECYQLMKSLG 1105
>BT010285-1|AAQ23603.1| 1113|Drosophila melanogaster LP12374p protein.
Length = 1113
Score = 176 bits (429), Expect = 2e-44
Identities = 96/232 (41%), Positives = 141/232 (60%), Gaps = 7/232 (3%)
Frame = -1
Query: 742 LPGALHMAYKSRRGLYSLAQCRDERSVERTSETILKV-CDLAGARLADSLAYYCCRKPTQ 566
LP ALH +++ L + +++++ + ++ + CD + L + L
Sbjct: 878 LPKALHAVLRAKMILLK----NNGNALDKSLKQLVNILCDESSVELQECLTVNRITDAKG 933
Query: 565 LMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----PHQQLRAFQRDLHSLRRLSQSLPW 398
+ +L Q+L CDW+LE R +WE P + L FQ DL+SLR + +++P
Sbjct: 934 IKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVPGEVLEKFQTDLNSLRNIVENIPN 993
Query: 397 VTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNRASIICG-KERALEGG-GGDGERA 224
SR++L AVCR+MAGA+P TQQLLD SLR R +SI CG K+R + GG+ ERA
Sbjct: 994 AQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAHSSIFCGSKDRRQQNFVGGERERA 1053
Query: 223 VALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGHRSRLPHCYNLMKSFG 68
A+Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G + +L CY LMKS G
Sbjct: 1054 SAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVGDKRKLKECYQLMKSLG 1105
>AE014296-3210|AAN11632.1| 1113|Drosophila melanogaster CG8522-PC,
isoform C protein.
Length = 1113
Score = 176 bits (429), Expect = 2e-44
Identities = 96/232 (41%), Positives = 141/232 (60%), Gaps = 7/232 (3%)
Frame = -1
Query: 742 LPGALHMAYKSRRGLYSLAQCRDERSVERTSETILKV-CDLAGARLADSLAYYCCRKPTQ 566
LP ALH +++ L + +++++ + ++ + CD + L + L
Sbjct: 878 LPKALHAVLRAKMILLK----NNGNALDKSLKQLVNILCDESSVELQECLTVNRITDAKG 933
Query: 565 LMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----PHQQLRAFQRDLHSLRRLSQSLPW 398
+ +L Q+L CDW+LE R +WE P + L FQ DL+SLR + +++P
Sbjct: 934 IKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVPGEVLEKFQTDLNSLRNIVENIPN 993
Query: 397 VTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNRASIICG-KERALEGG-GGDGERA 224
SR++L AVCR+MAGA+P TQQLLD SLR R +SI CG K+R + GG+ ERA
Sbjct: 994 AQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAHSSIFCGSKDRRQQNFVGGERERA 1053
Query: 223 VALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGHRSRLPHCYNLMKSFG 68
A+Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G + +L CY LMKS G
Sbjct: 1054 SAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVGDKRKLKECYQLMKSLG 1105
>AE014296-3209|AAN11631.1| 1113|Drosophila melanogaster CG8522-PB,
isoform B protein.
Length = 1113
Score = 176 bits (429), Expect = 2e-44
Identities = 96/232 (41%), Positives = 141/232 (60%), Gaps = 7/232 (3%)
Frame = -1
Query: 742 LPGALHMAYKSRRGLYSLAQCRDERSVERTSETILKV-CDLAGARLADSLAYYCCRKPTQ 566
LP ALH +++ L + +++++ + ++ + CD + L + L
Sbjct: 878 LPKALHAVLRAKMILLK----NNGNALDKSLKQLVNILCDESSVELQECLTVNRITDAKG 933
Query: 565 LMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----PHQQLRAFQRDLHSLRRLSQSLPW 398
+ +L Q+L CDW+LE R +WE P + L FQ DL+SLR + +++P
Sbjct: 934 IKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVPGEVLEKFQTDLNSLRNIVENIPN 993
Query: 397 VTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNRASIICG-KERALEGG-GGDGERA 224
SR++L AVCR+MAGA+P TQQLLD SLR R +SI CG K+R + GG+ ERA
Sbjct: 994 AQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAHSSIFCGSKDRRQQNFVGGERERA 1053
Query: 223 VALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGHRSRLPHCYNLMKSFG 68
A+Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G + +L CY LMKS G
Sbjct: 1054 SAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVGDKRKLKECYQLMKSLG 1105
>AE014296-3208|AAF49115.1| 1113|Drosophila melanogaster CG8522-PA,
isoform A protein.
Length = 1113
Score = 176 bits (429), Expect = 2e-44
Identities = 96/232 (41%), Positives = 141/232 (60%), Gaps = 7/232 (3%)
Frame = -1
Query: 742 LPGALHMAYKSRRGLYSLAQCRDERSVERTSETILKV-CDLAGARLADSLAYYCCRKPTQ 566
LP ALH +++ L + +++++ + ++ + CD + L + L
Sbjct: 878 LPKALHAVLRAKMILLK----NNGNALDKSLKQLVNILCDESSVELQECLTVNRITDAKG 933
Query: 565 LMMLMQVLCCDWMLEVRAGVWEATSGLRSSPA----PHQQLRAFQRDLHSLRRLSQSLPW 398
+ +L Q+L CDW+LE R +WE P + L FQ DL+SLR + +++P
Sbjct: 934 IKLLFQLLTCDWLLETRTALWELEHMNMEDDGFYQVPGEVLEKFQTDLNSLRNIVENIPN 993
Query: 397 VTSRVFLQSAVCRMMAGAAPRRTQQLLDGSLRPRFNRASIICG-KERALEGG-GGDGERA 224
SR++L AVCR+MAGA+P TQQLLD SLR R +SI CG K+R + GG+ ERA
Sbjct: 994 AQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAHSSIFCGSKDRRQQNFVGGERERA 1053
Query: 223 VALYMACKHLPAAVLAAPGERAGMLAQAAATLQKIGHRSRLPHCYNLMKSFG 68
A+Y+ACK+LP A+L++PGERAGMLA+AA TL+K+G + +L CY LMKS G
Sbjct: 1054 SAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVGDKRKLKECYQLMKSLG 1105
>AY051627-1|AAK93051.1| 517|Drosophila melanogaster GH27756p
protein.
Length = 517
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -1
Query: 304 RPRFNRASIICGKERALEGGGGDGERAVALYMACKHLPAAVLAAPGERA-GMLAQAAATL 128
RPR + +C K + GGG + + +L K A +L G +A M + L
Sbjct: 5 RPRKSSRKYVCSKSNSSVGGGVEEDSGSSLPATAK---ALLLQPDGNKAPTMTSLLGERL 61
Query: 127 QKIGHRSRLPH 95
+++ +R PH
Sbjct: 62 RRVSRIARAPH 72
>AE014298-2517|AAF48693.1| 517|Drosophila melanogaster CG4955-PA
protein.
Length = 517
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -1
Query: 304 RPRFNRASIICGKERALEGGGGDGERAVALYMACKHLPAAVLAAPGERA-GMLAQAAATL 128
RPR + +C K + GGG + + +L K A +L G +A M + L
Sbjct: 5 RPRKSSRKYVCSKSNSSVGGGVEEDSGSSLPATAK---ALLLQPDGNKAPTMTSLLGERL 61
Query: 127 QKIGHRSRLPH 95
+++ +R PH
Sbjct: 62 RRVSRIARAPH 72
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,394,993
Number of Sequences: 53049
Number of extensions: 707197
Number of successful extensions: 2693
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2683
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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