Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12o09f
         (552 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   1.3  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.8  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   8.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.8  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   8.8  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +3

Query: 228 DIDTKCKPEISSSPQVSPNYNHTGNPV--MSQHTHRIRPTPPISKT 359
           D+ +   P  SSSPQ++P      +P   M + +++ +P P  ++T
Sbjct: 169 DMSSPGAPTGSSSPQITPRPTPVKSPYEWMKKQSYQSQPNPGKTRT 214


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 404 CWQIEFLFFNISTLYCFTDRGRWPNSM 324
           CW  E   F  +T+  +  + RW  +M
Sbjct: 506 CWSFEIDGFKQATIKYYPSKERWEMTM 532


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 277 ETCGDDEISGLHFVSMSNSPVS 212
           E  G+D  SG+ F  MSNS ++
Sbjct: 446 ERFGEDLQSGIFFFGMSNSLIN 467


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 357 TIQGGYIKEEKFNLPTSLENASVTFPEVIPQQRTQVQNQPMI 482
           +I  G IK +      S    SV FPE IP++ + V+ + ++
Sbjct: 236 SIYSGIIKHDDELSFVSSPKDSV-FPETIPEEASSVEEERVV 276


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 277 ETCGDDEISGLHFVSMSNSPVS 212
           E  G+D  SG+ F  MSNS ++
Sbjct: 447 ERFGEDLQSGIFFFGMSNSLIN 468


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,220
Number of Sequences: 2352
Number of extensions: 11292
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)