Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12o08r
         (340 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    22   5.5  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    22   5.5  
DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    21   9.6  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    21   9.6  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 12  FLSPPSSKCLHLFNATCDLTLQSAHSR 92
           F+ P  +KC H F   C L      SR
Sbjct: 254 FVDPIVTKCKHYFCERCALAQYKKSSR 280


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 12  FLSPPSSKCLHLFNATCDLTLQSAHSR 92
           F+ P  +KC H F   C L      SR
Sbjct: 254 FVDPIVTKCKHYFCERCALAQYKKSSR 280


>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 187 YPGQRAFPWTFCTVIPCVLCGIY 255
           YPG R  P  FC   P  +   Y
Sbjct: 97  YPGGRCIPKLFCQRPPLPILSDY 119


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +3

Query: 243 LWHLHFLQYVLRCFGTFTIFE 305
           +W      YV+RC+  +T  E
Sbjct: 94  MWTREMNHYVIRCYYVYTRME 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,054
Number of Sequences: 2352
Number of extensions: 7813
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)