Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12o01f
(601 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive pep... 24 1.1
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 2.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.0
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 23 2.6
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 23 2.6
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 23 2.6
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 22 4.6
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 22 4.6
AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450 ... 21 7.9
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 21 7.9
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 21 7.9
AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450 ... 21 7.9
>EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive
peptide receptor 2 protein.
Length = 354
Score = 23.8 bits (49), Expect = 1.1
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +3
Query: 345 RVVWAGRMVLVAVNHFPTRSTATRKQR 425
R +W+ +L+ V H P R + R
Sbjct: 231 RTIWSKSKLLIPVGHIPIRQCDDHRDR 257
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.0 bits (47), Expect = 2.0
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 441 VRPARSRN-SSI*MEVELQRSSTATWMWIWILSVT 542
V P N SS+ + SS T +W+W+++++
Sbjct: 106 VLPGNYANASSVGSRNPIHTSSYMTGIWVWLINIS 140
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.0 bits (47), Expect = 2.0
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 441 VRPARSRN-SSI*MEVELQRSSTATWMWIWILSVT 542
V P N SS+ + SS T +W+W+++++
Sbjct: 339 VLPGNYANASSVGSRNPIHTSSYMTGIWVWLINIS 373
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.0 bits (47), Expect = 2.0
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 441 VRPARSRN-SSI*MEVELQRSSTATWMWIWILSVT 542
V P N SS+ + SS T +W+W+++++
Sbjct: 339 VLPGNYANASSVGSRNPIHTSSYMTGIWVWLINIS 373
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 22.6 bits (46), Expect = 2.6
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 197 YRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKREIYDA 325
Y+K K ++ + A EE E + Y++ +K+RE+Y++
Sbjct: 47 YQKAVEKLLTEQKELAEKEEA--ETLKRYKLNDLEKRREVYES 87
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 22.6 bits (46), Expect = 2.6
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 197 YRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKREIYDA 325
Y+K K ++ + A EE E + Y++ +K+RE+Y++
Sbjct: 207 YQKAVEKLLTEQKELAEKEEA--ETLKRYKLNDLEKRREVYES 247
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 22.6 bits (46), Expect = 2.6
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 197 YRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKREIYDA 325
Y+K K ++ + A EE E + Y++ +K+RE+Y++
Sbjct: 207 YQKAVEKLLTEQKELAEKEEA--ETLKRYKLNDLEKRREVYES 247
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 476 NGGGTTTFFDRDMD 517
N G T+FFD D D
Sbjct: 505 NKGKATSFFDEDQD 518
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.8 bits (44), Expect = 4.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 236 CSCPGGTL 213
CSCP GTL
Sbjct: 246 CSCPSGTL 253
>AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 505
Score = 21.0 bits (42), Expect = 7.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 239 AAGAEERFKEVAEAYEVLSDKKKREIY 319
A E + K V E EVL D KK+ Y
Sbjct: 329 AGHKEVQDKIVEEMNEVLGDIKKKPTY 355
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 21.0 bits (42), Expect = 7.9
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = -2
Query: 576 PGPPGRACPMLMLLKGSISTSMSRSKNVVVPPPFRSKNSW 457
P P M GS + S V PPP RS W
Sbjct: 87 PSPTVSGSEMSSPGAGSGNLSPQIQTQVARPPPARSPYEW 126
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 21.0 bits (42), Expect = 7.9
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = -2
Query: 576 PGPPGRACPMLMLLKGSISTSMSRSKNVVVPPPFRSKNSW 457
P P M GS + S V PPP RS W
Sbjct: 87 PSPTVSGSEMSSPGAGSGNLSPQIQTQVARPPPARSPYEW 126
>AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q7 protein.
Length = 505
Score = 21.0 bits (42), Expect = 7.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 239 AAGAEERFKEVAEAYEVLSDKKKREIY 319
A E + K V E EVL D KK+ Y
Sbjct: 329 AGHKEVQDKIVEEMNEVLGDIKKKPTY 355
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,266
Number of Sequences: 336
Number of extensions: 3192
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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