Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12n24r
         (749 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    27   0.14 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    27   0.14 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   1.3  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.1  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   4.0  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   9.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   9.3  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 747 ENGKHVLCEKPLCLNYKPAESLIRFAKNKKLFLMEAVWSRFSPTYIAIEKE 595
           E  K V C+     NY+ A S I  A NK+LF + A W++  P + ++  E
Sbjct: 212 EAEKRVECKMEQQGNYENAVSHICNATNKQLFQLVA-WAKHIPHFTSLPLE 261


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -3

Query: 747 ENGKHVLCEKPLCLNYKPAESLIRFAKNKKLFLMEAVWSRFSPTYIAIEKE 595
           E  K V C+     NY+ A S I  A NK+LF + A W++  P + ++  E
Sbjct: 212 EAEKRVECKMEQQGNYENAVSHICNATNKQLFQLVA-WAKHIPHFTSLPLE 261


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -3

Query: 171 RNSAGLVYQALEVEKCLKEGLIESPRMSHKESLVLAKLEQTVRKQLGVYY 22
           R  A +   +  V +   E LI  PR++ K   VL   E+    Q+GV++
Sbjct: 26  RRQASVEQPSFSVHQVYPENLI--PRLAKKAIQVLGVTEKEFFDQMGVHF 73


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -3

Query: 711 CLNYKPAESLIRFAKNKKLFLMEAVWSRFSPTYIAIEKEINS 586
           CL Y+PA +++    N   F     ++ F P    +  + NS
Sbjct: 272 CLRYRPARAIVETLANFMRFYYNP-FTPFGPVTEKVNNDSNS 312


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -3

Query: 711 CLNYKPAESLIRFAKNKKLFLMEAVWSRFSPTYIAIEKEINS 586
           CL Y+PA +++    N   F     ++ F P    +  + NS
Sbjct: 272 CLRYRPARAIVETLANFMRFYYNP-FTPFGPVTEKVNNDSNS 312


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 427 KSNNCRGSERRRSGHLRNDN 368
           K N  R ++ +R+G+ +NDN
Sbjct: 504 KQNGNRQNDNKRNGNRQNDN 523


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 473 IPMSITELPPNSFFLSLSTVTIGTPKLT 556
           +P     +P    ++SL T   G+PKLT
Sbjct: 83  VPRWRNGIPATLTYISLDTNRGGSPKLT 110


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 721 KTFVFELQTSREPNQVCEE*ETISNGSCLVE 629
           KTF+  ++    P+ +    E I NG CL++
Sbjct: 79  KTFLAVIRYDGVPSSLNVISEKIGNGGCLLQ 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,713
Number of Sequences: 438
Number of extensions: 5355
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)