Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12n24f
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 31 0.46
Z99280-3|CAE18018.1| 215|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z29116-4|CAA82370.2| 206|Caenorhabditis elegans Hypothetical pr... 27 7.5
U58760-1|AAK31461.1| 244|Caenorhabditis elegans Interactor of f... 27 7.5
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 27 7.5
U80453-4|AAK31441.2| 674|Caenorhabditis elegans Trehalase prote... 27 10.0
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr... 27 10.0
AJ512339-1|CAD54512.1| 674|Caenorhabditis elegans trehalase pro... 27 10.0
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical
protein F57C7.4 protein.
Length = 1484
Score = 31.5 bits (68), Expect = 0.46
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +3
Query: 342 KLFLENGKHVLCEKPLCLNYKQAESLIRFAKNKKLFLMEAVWSRFSP 482
++ +EN +L E P+CL A I+F N K+ +++ V ++FSP
Sbjct: 263 EVLMENSS-ILGENPICLG-DGANVAIKFGANPKIGILQEVKTKFSP 307
>Z99280-3|CAE18018.1| 215|Caenorhabditis elegans Hypothetical
protein Y57G11B.7 protein.
Length = 215
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 285 NEIDVAYIGALNPDHYNISKLFLENGKHVLCEKPLCLNY 401
NE V G L D N+ K+F + +LCEK L NY
Sbjct: 133 NEFPVFISGNLELDTVNLPKMFHKPYSPLLCEKRLMPNY 171
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 371 SLRKTFVFELQTSREPNQVCEE*ETISNGSCLVEIFSHLHCH*K 502
S + V ++ +++EPN +C NG C+ +H C K
Sbjct: 3122 SSEEIVVGDVYSTQEPNNICANSTCGMNGQCVPRNMTHYTCECK 3165
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 371 SLRKTFVFELQTSREPNQVCEE*ETISNGSCLVEIFSHLHCH*K 502
S + V ++ +++EPN +C NG C+ +H C K
Sbjct: 3122 SSEEIVVGDVYSTQEPNNICANSTCGMNGQCVPRNMTHYTCECK 3165
>Z29116-4|CAA82370.2| 206|Caenorhabditis elegans Hypothetical
protein ZK507.4 protein.
Length = 206
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 315 AHQYKPHQSHYSQPRLYRNRI-LWEYC 238
AH + +SH+S+PRL + + + EYC
Sbjct: 19 AHDWDSFESHHSEPRLRTSNLDVGEYC 45
>U58760-1|AAK31461.1| 244|Caenorhabditis elegans Interactor of
fizzy protein protein1 protein.
Length = 244
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 159 NSYPNKGDQVIAAVAARTKPEEFAKLHNIPIVFDSYKALAESNEIDVAYI 308
NS G + + ++A+ K K + IPI F+ Y+ + DVA I
Sbjct: 46 NSSKTPGGKSLQSLASACKVPPSTKKNTIPIAFECYEDETDDQIADVATI 95
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 371 SLRKTFVFELQTSREPNQVCEE*ETISNGSCLVEIFSHLHCH*K 502
S + V ++ +++EPN +C NG C+ +H C K
Sbjct: 672 SSEEIVVGDVYSTQEPNNICANSTCGMNGQCVPRNMTHYTCECK 715
>U80453-4|AAK31441.2| 674|Caenorhabditis elegans Trehalase protein
5 protein.
Length = 674
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 457 KLFGRDFLPPT-LPLKKKSIPGNWETLCSSKSILVYLLLQ 573
+L G D+ + LP ++ PG W CS K + + +Q
Sbjct: 57 QLIGSDYFNGSVLPCDNETAPGQWMIYCSGKLLQTVMAVQ 96
>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical
protein K06C4.15 protein.
Length = 1067
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 183 QVIAAVAARTKPEEFAKLHNIPIVFDSYKALAESNEIDVAYIGALNPDHYNISKLFLENG 362
Q+ + RT A + N+P Y A S+E D+AY+ N DH+ I+ + NG
Sbjct: 563 QLKMRASQRTLTLMIAGIPNMPET--PYSAPFFSDE-DLAYMNRHNIDHFEITSTNIYNG 619
Query: 363 KHV 371
+ +
Sbjct: 620 RRI 622
>AJ512339-1|CAD54512.1| 674|Caenorhabditis elegans trehalase
protein.
Length = 674
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 457 KLFGRDFLPPT-LPLKKKSIPGNWETLCSSKSILVYLLLQ 573
+L G D+ + LP ++ PG W CS K + + +Q
Sbjct: 57 QLIGSDYFNGSVLPCDNETAPGQWMIYCSGKLLQTVMAVQ 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,070,686
Number of Sequences: 27780
Number of extensions: 274346
Number of successful extensions: 704
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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