Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12n19r
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73905-1|CAA98110.1| 244|Caenorhabditis elegans Hypothetical pr... 61 7e-10
Z70754-10|CAA94779.2| 273|Caenorhabditis elegans Hypothetical p... 48 5e-06
Z70753-13|CAA94770.2| 273|Caenorhabditis elegans Hypothetical p... 48 5e-06
U40415-8|AAP68935.1| 294|Caenorhabditis elegans Aquaporin or aq... 36 0.029
U40415-7|AAP68934.1| 258|Caenorhabditis elegans Aquaporin or aq... 36 0.029
U20864-5|AAN65321.1| 295|Caenorhabditis elegans Aquaporin or aq... 36 0.039
U20864-4|AAC46664.2| 304|Caenorhabditis elegans Aquaporin or aq... 36 0.039
Z71185-1|CAA94903.1| 290|Caenorhabditis elegans Hypothetical pr... 35 0.051
AL034365-7|CAA22259.1| 421|Caenorhabditis elegans Hypothetical ... 33 0.27
Z35595-2|CAA84642.1| 285|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z35595-1|CAA84633.1| 290|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 29 2.5
U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin prote... 29 4.4
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote... 29 4.4
U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin prote... 29 4.4
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 29 4.4
AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin pro... 29 4.4
Z73910-4|CAA98136.1| 662|Caenorhabditis elegans Hypothetical pr... 28 5.9
U41548-1|AAA83205.2| 291|Caenorhabditis elegans Aquaporin or aq... 28 7.8
>Z73905-1|CAA98110.1| 244|Caenorhabditis elegans Hypothetical
protein C32C4.2 protein.
Length = 244
Score = 61.3 bits (142), Expect = 7e-10
Identities = 49/182 (26%), Positives = 66/182 (36%), Gaps = 16/182 (8%)
Frame = -3
Query: 678 HPAFAFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAAYTVAQVXXXXXXXX 499
H AFA G + A FG SGAH+NPAVT AL GR+SP A Y V+Q+
Sbjct: 43 HAAFAHGVAIFVLAATFGGVSGAHINPAVTFGIALVGRISPIHAVCYVVSQLLGSVFGAL 102
Query: 498 XXXAVTPASALGT-DEGCTL--PXXXXXXXXXXXXXXXXXXXXXXACCGVWKAHDESGPD 328
P G TL C V ++ +
Sbjct: 103 LVRISLPYKMYNVISAGATLCGKGYNWQEGLTAEIVTTYILVQTVLLCAV-----DTDKN 157
Query: 327 PMVPVKXXXXXXXXXXXXXXATGASLNPARSFAPALYHGI-------------WQYHWVY 187
+ P+ +GAS+NPARSF P + + W YHW+Y
Sbjct: 158 RLAPLAIGFSLIIEILAAGAISGASMNPARSFGPNIMGQVFLKPEHLDAQYMYWNYHWIY 217
Query: 186 WV 181
++
Sbjct: 218 YI 219
>Z70754-10|CAA94779.2| 273|Caenorhabditis elegans Hypothetical
protein F40F9.9 protein.
Length = 273
Score = 48.4 bits (110), Expect = 5e-06
Identities = 46/175 (26%), Positives = 62/175 (35%), Gaps = 10/175 (5%)
Frame = -3
Query: 678 HPAFAFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAAYTVAQVXXXXXXXX 499
H AFA GF + AFG SG H NPAV+ A A G+M Y V+Q+
Sbjct: 76 HAAFAHGFTIFILVTAFGHISGGHFNPAVSWAIAGAGKMPIFHLPFYVVSQLLGGICGAF 135
Query: 498 XXXAVTPASALGTDE-GCTLPXXXXXXXXXXXXXXXXXXXXXXACCGVWKAHDESGPDPM 322
AV L + E G TL + ++ +
Sbjct: 136 LTAAVLSQEQLTSCEAGATLLSPGSQWWQGLIAETVVTFFLVHT---ILITAADTDTVTL 192
Query: 321 VPVKXXXXXXXXXXXXXXATGASLNPARSFAPALYHGI---------WQYHWVYW 184
P+ TGAS+NPARS P++ I W H++YW
Sbjct: 193 APLAIGLTLSIDILSTGSITGASMNPARSLGPSIIGSIFATQKTSFYWNNHYIYW 247
>Z70753-13|CAA94770.2| 273|Caenorhabditis elegans Hypothetical
protein F40F9.9 protein.
Length = 273
Score = 48.4 bits (110), Expect = 5e-06
Identities = 46/175 (26%), Positives = 62/175 (35%), Gaps = 10/175 (5%)
Frame = -3
Query: 678 HPAFAFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAAYTVAQVXXXXXXXX 499
H AFA GF + AFG SG H NPAV+ A A G+M Y V+Q+
Sbjct: 76 HAAFAHGFTIFILVTAFGHISGGHFNPAVSWAIAGAGKMPIFHLPFYVVSQLLGGICGAF 135
Query: 498 XXXAVTPASALGTDE-GCTLPXXXXXXXXXXXXXXXXXXXXXXACCGVWKAHDESGPDPM 322
AV L + E G TL + ++ +
Sbjct: 136 LTAAVLSQEQLTSCEAGATLLSPGSQWWQGLIAETVVTFFLVHT---ILITAADTDTVTL 192
Query: 321 VPVKXXXXXXXXXXXXXXATGASLNPARSFAPALYHGI---------WQYHWVYW 184
P+ TGAS+NPARS P++ I W H++YW
Sbjct: 193 APLAIGLTLSIDILSTGSITGASMNPARSLGPSIIGSIFATQKTSFYWNNHYIYW 247
>U40415-8|AAP68935.1| 294|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 8, isoform b protein.
Length = 294
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -3
Query: 678 HPAFAFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAAYTVAQV 523
H A+ GF+ A SG H+NPA+++A ++ G + P Y +AQV
Sbjct: 56 HIAWGIGFMFAVYLAA--SVSGGHLNPAISVAQSILGNLPPWKIIPYAIAQV 105
>U40415-7|AAP68934.1| 258|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 8, isoform a protein.
Length = 258
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -3
Query: 678 HPAFAFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAAYTVAQV 523
H A+ GF+ A SG H+NPA+++A ++ G + P Y +AQV
Sbjct: 56 HIAWGIGFMFAVYLAA--SVSGGHLNPAISVAQSILGNLPPWKIIPYAIAQV 105
>U20864-5|AAN65321.1| 295|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 1, isoform b protein.
Length = 295
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -3
Query: 663 FGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAAYTVAQ 526
+GF ++ MA SG H+NPAV+L G + A Y +AQ
Sbjct: 64 WGFAIMFAVMATARMSGGHLNPAVSLLLWSLGHLKLAWVPLYAIAQ 109
>U20864-4|AAC46664.2| 304|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 1, isoform a protein.
Length = 304
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -3
Query: 663 FGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAAYTVAQ 526
+GF ++ MA SG H+NPAV+L G + A Y +AQ
Sbjct: 73 WGFAIMFAVMATARMSGGHLNPAVSLLLWSLGHLKLAWVPLYAIAQ 118
>Z71185-1|CAA94903.1| 290|Caenorhabditis elegans Hypothetical
protein C35A5.1 protein.
Length = 290
Score = 35.1 bits (77), Expect = 0.051
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -3
Query: 708 YKGKEAVVLSHPAFAFGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAAYTVA 529
Y + V L+H A G + FG SG H NP V+ A L ++ P Y +
Sbjct: 41 YDISQPVGLTHAALTHGLATIVVIAVFGKISGGHFNPVVSWAMVLCQKLHPFELPFYMFS 100
Query: 528 Q 526
Q
Sbjct: 101 Q 101
>AL034365-7|CAA22259.1| 421|Caenorhabditis elegans Hypothetical
protein Y69E1A.7 protein.
Length = 421
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 663 FGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAAYTVAQ 526
+G V++ + SGAH+NPAV+ QG+++ Y VAQ
Sbjct: 161 WGLVLMLAVLMGSKISGAHLNPAVSFFQLTQGKINLIRFLVYAVAQ 206
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 261 GASLNPARSFAPALYHGIWQYHW 193
G ++NPAR FAP L++ Y W
Sbjct: 308 GYAINPARDFAPRLFNLCAGYGW 330
>Z35595-2|CAA84642.1| 285|Caenorhabditis elegans Hypothetical
protein C01G6.1b protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 663 FGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAAYTVAQ 526
FG ++ SG H+NPAV+ A G+++ AY VAQ
Sbjct: 58 FGIAIVFGVAVSAKLSGGHINPAVSFAFLSVGQITIVQFIAYFVAQ 103
>Z35595-1|CAA84633.1| 290|Caenorhabditis elegans Hypothetical
protein C01G6.1a protein.
Length = 290
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 663 FGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAAYTVAQ 526
FG ++ SG H+NPAV+ A G+++ AY VAQ
Sbjct: 58 FGIAIVFGVAVSAKLSGGHINPAVSFAFLSVGQITIVQFIAYFVAQ 103
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 590 VTAGFMCAPDVGPNAIALPSTTNPKAKAGCDST 688
V AG CA D+GP PSTTN + DST
Sbjct: 164 VFAGTACAKDIGPRE---PSTTNKVLQQEADST 193
>U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin protein
1, isoform a protein.
Length = 953
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 178 THPVHPMILPNSVI*SRCEATSRVQASSRRVSPGENQPGHHESQLHG 318
T P H + P+S C TS A +R + G Q H Q G
Sbjct: 401 TSPRHSLATPSSYAHDTCHDTSLPDADTRSIDSGVVQSDHSNPQQSG 447
>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
1, isoform b protein.
Length = 1028
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 178 THPVHPMILPNSVI*SRCEATSRVQASSRRVSPGENQPGHHESQLHG 318
T P H + P+S C TS A +R + G Q H Q G
Sbjct: 476 TSPRHSLATPSSYAHDTCHDTSLPDADTRSIDSGVVQSDHSNPQQSG 522
>U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin protein
1, isoform c protein.
Length = 962
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 178 THPVHPMILPNSVI*SRCEATSRVQASSRRVSPGENQPGHHESQLHG 318
T P H + P+S C TS A +R + G Q H Q G
Sbjct: 410 TSPRHSLATPSSYAHDTCHDTSLPDADTRSIDSGVVQSDHSNPQQSG 456
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
1, isoform d protein.
Length = 1106
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 178 THPVHPMILPNSVI*SRCEATSRVQASSRRVSPGENQPGHHESQLHG 318
T P H + P+S C TS A +R + G Q H Q G
Sbjct: 554 TSPRHSLATPSSYAHDTCHDTSLPDADTRSIDSGVVQSDHSNPQQSG 600
>AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin
protein.
Length = 953
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 178 THPVHPMILPNSVI*SRCEATSRVQASSRRVSPGENQPGHHESQLHG 318
T P H + P+S C TS A +R + G Q H Q G
Sbjct: 401 TSPRHSLATPSSYAHDTCHDTSLPDADTRSIDSGVVQSDHSNPQQSG 447
>Z73910-4|CAA98136.1| 662|Caenorhabditis elegans Hypothetical
protein M117.4 protein.
Length = 662
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +3
Query: 585 PASRPGSCAHPTSARTPSHCRAPQTRKQKRDVTARRPPSLCTAPR 719
P S P + PT ART + P + D R+P + P+
Sbjct: 284 PGSHPSAYLQPTRARTERSLKLPPAEPKSVDERPRKPSTQILQPQ 328
>U41548-1|AAA83205.2| 291|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 7 protein.
Length = 291
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -3
Query: 663 FGFVVLGNAMAFGPTSGAHMNPAVTLAAALQGRMSPALAAAYTVAQ 526
+G + TSG H NPAV++A G++ Y V Q
Sbjct: 63 WGLAIAFTVYTCSKTSGGHFNPAVSIAFLTLGKLPFKDFLVYCVVQ 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,417,074
Number of Sequences: 27780
Number of extensions: 156259
Number of successful extensions: 673
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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