Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12n19f
         (595 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    30   0.065
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   3.2  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   4.3  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   5.6  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   5.6  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   5.6  
AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    23   7.4  
AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative odorant-b...    23   9.8  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   9.8  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 29.9 bits (64), Expect = 0.065
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +3

Query: 243 GARQCDGVRADVGCAHEPGRDAGCRAAGP 329
           GAR   G+R DVG    PGRD      GP
Sbjct: 758 GARGLQGLRGDVGPEGRPGRDGAPGLPGP 786



 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 243 GARQCDGVRADVGCAHEPGRDAGCRAAGP 329
           GA    G+R D G   E GR      AGP
Sbjct: 18  GAPGIQGIRGDKGEMGEQGRTGAQGNAGP 46


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 274 TSGAHMNPAVTLAAALQGRMSPA 342
           T+GAH +  VT+   L GR+  A
Sbjct: 62  TNGAHPSKCVTIQRTLDGRLQVA 84


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 149 AVASSSETNARHHRRTQPEK 90
           AVAS S   A+HH +  PEK
Sbjct: 748 AVASVSHWMAQHHLQIAPEK 767


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -3

Query: 248 STTNPKAKAGCDSTTASFPLYGTTELTPSHTRN 150
           + T P A      T    P  G  +  PSHT+N
Sbjct: 501 AATQPNASVPMFETNLPGPSNGWVQPVPSHTQN 533


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = -2

Query: 198 LPFVRHHGADAEPHEERRGQQLGDQRSPPSPHP 100
           +P   H  +   PH     Q LG   S  SP P
Sbjct: 153 VPLTIHRRSPGVPHHVAEPQHLGATHSCVSPEP 185


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = -2

Query: 198 LPFVRHHGADAEPHEERRGQQLGDQRSPPSPHP 100
           +P   H  +   PH     Q LG   S  SP P
Sbjct: 153 VPLTIHRRSPGVPHHVAEPQHLGATHSCVSPEP 185


>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 20  SLRPHRHARARSTCPPQTKIRRAVFPA 100
           S+R H  AR R+ CP         FP+
Sbjct: 65  SIRMHASARKRAYCPRTRSACAETFPS 91


>AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative
           odorant-binding protein OBPjj16 protein.
          Length = 198

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 313 QPASRPGSCAHPTSARTPSHCRAPQ 239
           QP +   SC  PT+      C+ P+
Sbjct: 18  QPPAPDASCFQPTAVTAEDCCKIPK 42


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 147  RGQQLGDQRSPPSPHPAGKTARR 79
            R ++L     PPSP P+ +TA R
Sbjct: 1058 RQRELQRAGRPPSPPPSPRTAAR 1080


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,352
Number of Sequences: 2352
Number of extensions: 10006
Number of successful extensions: 34
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)