Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12n19f
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   3.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   3.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   3.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.1  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 271 PTSGAHMNPAVTLAAALQGRMSP 339
           P SG H + A  LAA L G + P
Sbjct: 515 PPSGHHASSAPLLAATLAGGLCP 537


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 320 SAAASVTAGFMCAPDVGPNAIALPS 246
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 320 SAAASVTAGFMCAPDVGPNAIALPS 246
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 320 SAAASVTAGFMCAPDVGPNAIALPS 246
           +AAAS+T GF+    V  NA+ + S
Sbjct: 36  AAAASLTLGFLVLATVLGNALVILS 60


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 212 STTASFPLYGTTELTPSHTRNAVASS 135
           +TT +     TT  TP+ T+NA A++
Sbjct: 663 TTTTTTTTTTTTTTTPNTTQNASATT 688


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 57  VERARACRCGRSEC 16
           +ERA++ R  R+EC
Sbjct: 248 IERAKSIRARRTEC 261


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 224 AGCDSTTASFPLYGTTELTPSHTRNAVASSSETN 123
           A   ST+ S+P  G++  +PS   +  +S S T+
Sbjct: 74  AAITSTSPSYPGGGSSSPSPSSPSSFFSSVSPTS 107


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/31 (25%), Positives = 11/31 (35%)
 Frame = -2

Query: 195 PFVRHHGADAEPHEERRGQQLGDQRSPPSPH 103
           P   H    + PH +     +G    PP  H
Sbjct: 323 PSQYHPHRGSSPHHQHGNHTMGPTMGPPHHH 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,381
Number of Sequences: 438
Number of extensions: 2393
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)