Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12n09r
(755 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 310 3e-84
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 310 3e-84
BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IM... 310 3e-84
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 310 3e-84
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 308 1e-83
AL049712-3|CAI22416.1| 218|Homo sapiens nucleolar protein 5A (5... 273 4e-73
BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein NOP5/... 178 2e-44
BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein prot... 178 2e-44
AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5 pro... 178 2e-44
AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein NOP5/... 178 2e-44
AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein. 178 2e-44
BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 102 1e-21
AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 101 2e-21
AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 101 4e-21
AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 100 6e-21
AL359644-1|CAH70729.1| 123|Homo sapiens stomatin protein. 31 5.9
AL161784-1|CAH72706.1| 123|Homo sapiens stomatin protein. 31 5.9
BC117417-1|AAI17418.1| 1222|Homo sapiens sortilin-related VPS10 ... 30 7.8
AL596118-1|CAH70023.1| 1222|Homo sapiens VPS10 domain receptor p... 30 7.8
AL445492-1|CAH70477.1| 1222|Homo sapiens VPS10 domain receptor p... 30 7.8
AL365449-1|CAH70813.1| 1222|Homo sapiens VPS10 domain receptor p... 30 7.8
AL358949-1|CAH72221.1| 1222|Homo sapiens VPS10 domain receptor p... 30 7.8
AL353900-2|CAI64579.1| 1222|Homo sapiens VPS10 domain receptor p... 30 7.8
AL161646-1|CAH70335.1| 1222|Homo sapiens VPS10 domain receptor p... 30 7.8
AB028982-1|BAA83011.2| 1222|Homo sapiens KIAA1059 protein protein. 30 7.8
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 310 bits (762), Expect = 3e-84
Identities = 147/203 (72%), Positives = 177/203 (87%)
Frame = -3
Query: 753 EPLTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSK 574
E L E+ D KA+AI+DAS+ SMGMDIS +DLINI+ F+ RVV+LS YR+ + YL SK
Sbjct: 229 EKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSK 288
Query: 573 MNSVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKY 394
M+ VAP+LS L+G+ VGARLI+ AGSLTNLAKYPAST+QILGAEKALFRALKTR NTPKY
Sbjct: 289 MSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKY 348
Query: 393 GLLYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFY 214
GL++HSTFIGRA KNKGRISRYLANKCSIASRIDCFSE+ ++VFGEKLR+QVE+RL FY
Sbjct: 349 GLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFY 408
Query: 213 ETGDIPKKNIEVMKEAMDEVQKA 145
ETG+IP+KN++VMKEAM + ++A
Sbjct: 409 ETGEIPRKNLDVMKEAMVQAEEA 431
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 310 bits (762), Expect = 3e-84
Identities = 147/203 (72%), Positives = 177/203 (87%)
Frame = -3
Query: 753 EPLTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSK 574
E L E+ D KA+AI+DAS+ SMGMDIS +DLINI+ F+ RVV+LS YR+ + YL SK
Sbjct: 229 EKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSK 288
Query: 573 MNSVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKY 394
M+ VAP+LS L+G+ VGARLI+ AGSLTNLAKYPAST+QILGAEKALFRALKTR NTPKY
Sbjct: 289 MSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKY 348
Query: 393 GLLYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFY 214
GL++HSTFIGRA KNKGRISRYLANKCSIASRIDCFSE+ ++VFGEKLR+QVE+RL FY
Sbjct: 349 GLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFY 408
Query: 213 ETGDIPKKNIEVMKEAMDEVQKA 145
ETG+IP+KN++VMKEAM + ++A
Sbjct: 409 ETGEIPRKNLDVMKEAMVQAEEA 431
>BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for
IMAGE:4448930) protein.
Length = 447
Score = 310 bits (762), Expect = 3e-84
Identities = 147/203 (72%), Positives = 177/203 (87%)
Frame = -3
Query: 753 EPLTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSK 574
E L E+ D KA+AI+DAS+ SMGMDIS +DLINI+ F+ RVV+LS YR+ + YL SK
Sbjct: 225 EKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSK 284
Query: 573 MNSVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKY 394
M+ VAP+LS L+G+ VGARLI+ AGSLTNLAKYPAST+QILGAEKALFRALKTR NTPKY
Sbjct: 285 MSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKY 344
Query: 393 GLLYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFY 214
GL++HSTFIGRA KNKGRISRYLANKCSIASRIDCFSE+ ++VFGEKLR+QVE+RL FY
Sbjct: 345 GLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFY 404
Query: 213 ETGDIPKKNIEVMKEAMDEVQKA 145
ETG+IP+KN++VMKEAM + ++A
Sbjct: 405 ETGEIPRKNLDVMKEAMVQAEEA 427
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 310 bits (762), Expect = 3e-84
Identities = 147/203 (72%), Positives = 177/203 (87%)
Frame = -3
Query: 753 EPLTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSK 574
E L E+ D KA+AI+DAS+ SMGMDIS +DLINI+ F+ RVV+LS YR+ + YL SK
Sbjct: 229 EKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSK 288
Query: 573 MNSVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKY 394
M+ VAP+LS L+G+ VGARLI+ AGSLTNLAKYPAST+QILGAEKALFRALKTR NTPKY
Sbjct: 289 MSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKY 348
Query: 393 GLLYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFY 214
GL++HSTFIGRA KNKGRISRYLANKCSIASRIDCFSE+ ++VFGEKLR+QVE+RL FY
Sbjct: 349 GLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFY 408
Query: 213 ETGDIPKKNIEVMKEAMDEVQKA 145
ETG+IP+KN++VMKEAM + ++A
Sbjct: 409 ETGEIPRKNLDVMKEAMVQAEEA 431
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 308 bits (757), Expect = 1e-83
Identities = 146/201 (72%), Positives = 175/201 (87%)
Frame = -3
Query: 753 EPLTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSK 574
E L E+ D KA+AI+DAS+ SMGMDIS +DLINI+ F+ RVV+LS YR+ + YL SK
Sbjct: 235 EKLEELTMDGAKAKAILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSK 294
Query: 573 MNSVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKY 394
M+ VAP+LS L+G+ VGARLI+ AGSLTNLAKYPAST+QILGAEKALFRALKTR NTPKY
Sbjct: 295 MSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKY 354
Query: 393 GLLYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFY 214
GL++HSTFIGRA KNKGRISRYLANKCSIASRIDCFSE+ ++VFGEKLR+QVE+RL FY
Sbjct: 355 GLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFY 414
Query: 213 ETGDIPKKNIEVMKEAMDEVQ 151
ETG+IP+KN++VMKEAM + +
Sbjct: 415 ETGEIPRKNLDVMKEAMVQAE 435
>AL049712-3|CAI22416.1| 218|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 218
Score = 273 bits (670), Expect = 4e-73
Identities = 128/171 (74%), Positives = 153/171 (89%)
Frame = -3
Query: 657 LINIQMFAGRVVALSNYRKQISEYLHSKMNSVAPNLSTLVGDQVGARLISKAGSLTNLAK 478
LINI+ F+ RVV+LS YR+ + YL SKM+ VAP+LS L+G+ VGARLI+ AGSLTNLAK
Sbjct: 1 LINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAK 60
Query: 477 YPASTLQILGAEKALFRALKTRSNTPKYGLLYHSTFIGRAGLKNKGRISRYLANKCSIAS 298
YPAST+QILGAEKALFRALKTR NTPKYGL++HSTFIGRA KNKGRISRYLANKCSIAS
Sbjct: 61 YPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIAS 120
Query: 297 RIDCFSEMQSAVFGEKLRQQVEDRLKFYETGDIPKKNIEVMKEAMDEVQKA 145
RIDCFSE+ ++VFGEKLR+QVE+RL FYETG+IP+KN++VMKEAM + ++A
Sbjct: 121 RIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAMVQAEEA 171
>BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 178 bits (434), Expect = 2e-44
Identities = 90/185 (48%), Positives = 132/185 (71%)
Frame = -3
Query: 747 LTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMN 568
L+E+L + +A+ + A+++SMG ++S D+ NI +V+ +S YR Q+ EYL ++M
Sbjct: 222 LSELLPEEVEAE-VKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMM 280
Query: 567 SVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKYGL 388
++APN++ +VG+ VGARLI+ AGSL NLAK+ AST+QILGAEKALFRALK+R +TPKYGL
Sbjct: 281 AIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGL 340
Query: 387 LYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFYET 208
+YH++ +G+ K+KG+ISR LA K +A R D F E S+ G + R ++E RL+ E
Sbjct: 341 IYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLED 400
Query: 207 GDIPK 193
I K
Sbjct: 401 RGIRK 405
>BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein
protein.
Length = 522
Score = 178 bits (434), Expect = 2e-44
Identities = 90/185 (48%), Positives = 132/185 (71%)
Frame = -3
Query: 747 LTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMN 568
L+E+L + +A+ + A+++SMG ++S D+ NI +V+ +S YR Q+ EYL ++M
Sbjct: 222 LSELLPEEVEAE-VKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMM 280
Query: 567 SVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKYGL 388
++APN++ +VG+ VGARLI+ AGSL NLAK+ AST+QILGAEKALFRALK+R +TPKYGL
Sbjct: 281 AIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGL 340
Query: 387 LYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFYET 208
+YH++ +G+ K+KG+ISR LA K +A R D F E S+ G + R ++E RL+ E
Sbjct: 341 IYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLED 400
Query: 207 GDIPK 193
I K
Sbjct: 401 RGIRK 405
>AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5
protein.
Length = 529
Score = 178 bits (434), Expect = 2e-44
Identities = 90/185 (48%), Positives = 132/185 (71%)
Frame = -3
Query: 747 LTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMN 568
L+E+L + +A+ + A+++SMG ++S D+ NI +V+ +S YR Q+ EYL ++M
Sbjct: 222 LSELLPEEVEAE-VKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMM 280
Query: 567 SVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKYGL 388
++APN++ +VG+ VGARLI+ AGSL NLAK+ AST+QILGAEKALFRALK+R +TPKYGL
Sbjct: 281 AIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGL 340
Query: 387 LYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFYET 208
+YH++ +G+ K+KG+ISR LA K +A R D F E S+ G + R ++E RL+ E
Sbjct: 341 IYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLED 400
Query: 207 GDIPK 193
I K
Sbjct: 401 RGIRK 405
>AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 178 bits (434), Expect = 2e-44
Identities = 90/185 (48%), Positives = 132/185 (71%)
Frame = -3
Query: 747 LTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMN 568
L+E+L + +A+ + A+++SMG ++S D+ NI +V+ +S YR Q+ EYL ++M
Sbjct: 222 LSELLPEEVEAE-VKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMM 280
Query: 567 SVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKYGL 388
++APN++ +VG+ VGARLI+ AGSL NLAK+ AST+QILGAEKALFRALK+R +TPKYGL
Sbjct: 281 AIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGL 340
Query: 387 LYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFYET 208
+YH++ +G+ K+KG+ISR LA K +A R D F E S+ G + R ++E RL+ E
Sbjct: 341 IYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLED 400
Query: 207 GDIPK 193
I K
Sbjct: 401 RGIRK 405
>AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein.
Length = 529
Score = 178 bits (434), Expect = 2e-44
Identities = 90/185 (48%), Positives = 132/185 (71%)
Frame = -3
Query: 747 LTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMN 568
L+E+L + +A+ + A+++SMG ++S D+ NI +V+ +S YR Q+ EYL ++M
Sbjct: 222 LSELLPEEVEAE-VKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMM 280
Query: 567 SVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKYGL 388
++APN++ +VG+ VGARLI+ AGSL NLAK+ AST+QILGAEKALFRALK+R +TPKYGL
Sbjct: 281 AIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGL 340
Query: 387 LYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFYET 208
+YH++ +G+ K+KG+ISR LA K +A R D F E S+ G + R ++E RL+ E
Sbjct: 341 IYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLED 400
Query: 207 GDIPK 193
I K
Sbjct: 401 RGIRK 405
>BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing
factor 31 homolog (S. cerevisiae) protein.
Length = 499
Score = 102 bits (245), Expect = 1e-21
Identities = 56/202 (27%), Positives = 106/202 (52%)
Frame = -3
Query: 753 EPLTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSK 574
E L +IL ++ + AS + G +S +L ++ + L+ + +I EY+ S+
Sbjct: 153 ENLQQILTNATIMVVSVTAST-TQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 573 MNSVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKY 394
M+ +APNLS ++G A+++ AG LTNL+K PA + +LGA++ + S P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 393 GLLYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFY 214
G +YHS + + + +R +A KC++A+R+D F E G +L+ ++E + +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKW 331
Query: 213 ETGDIPKKNIEVMKEAMDEVQK 148
+ P K ++ + +D +K
Sbjct: 332 QEPP-PVKQVKPLPAPLDGQRK 352
>AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61
kDa protein protein.
Length = 499
Score = 101 bits (243), Expect = 2e-21
Identities = 56/202 (27%), Positives = 105/202 (51%)
Frame = -3
Query: 753 EPLTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSK 574
E L +IL ++ + AS + G +S +L + + L+ + +I EY+ S+
Sbjct: 153 ENLQQILTNATIMVVSVTAST-TQGQQLSEEELERLDEACDMALELNASKHRIYEYVESR 211
Query: 573 MNSVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKY 394
M+ +APNLS ++G A+++ AG LTNL+K PA + +LGA++ + S P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 393 GLLYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFY 214
G +YHS + + + +R +A KC++A+R+D F E G +L+ ++E + +
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKW 331
Query: 213 ETGDIPKKNIEVMKEAMDEVQK 148
+ P K ++ + +D +K
Sbjct: 332 QEPP-PVKQVKPLPAPLDGQRK 352
>AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined
breast cancer antigen NY-BR-99 protein.
Length = 278
Score = 101 bits (241), Expect = 4e-21
Identities = 55/202 (27%), Positives = 105/202 (51%)
Frame = -3
Query: 753 EPLTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSK 574
E L +IL ++ + AS + G +S +L ++ + L+ + +I EY+ S+
Sbjct: 73 ENLQQILTNATIMVVSVTAST-TQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 131
Query: 573 MNSVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKY 394
M+ +APNLS ++G A+++ G LTNL+K PA + +LGA++ + S P
Sbjct: 132 MSFIAPNLSIIIGASTAAKIMGVGGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 191
Query: 393 GLLYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVEDRLKFY 214
G +YHS + + + +R +A KC++A+R+D F E G +L+ ++E + +
Sbjct: 192 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIERKFDKW 251
Query: 213 ETGDIPKKNIEVMKEAMDEVQK 148
+ P K ++ + +D +K
Sbjct: 252 QEPP-PVKQVKPLPAPLDGQRK 272
>AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25681 fis, clone TST04131. ).
Length = 364
Score = 100 bits (239), Expect = 6e-21
Identities = 52/174 (29%), Positives = 94/174 (54%)
Frame = -3
Query: 753 EPLTEILGDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSK 574
E L +IL ++ + AS + G +S +L ++ + L+ + +I EY+ S+
Sbjct: 153 ENLQQILTNATIMVVSVTAST-TQGQQLSEEELERLEEACDMALELNASKHRIYEYVESR 211
Query: 573 MNSVAPNLSTLVGDQVGARLISKAGSLTNLAKYPASTLQILGAEKALFRALKTRSNTPKY 394
M+ +APNLS ++G A+++ AG LTNL+K PA + +LGA++ + S P
Sbjct: 212 MSFIAPNLSIIIGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHT 271
Query: 393 GLLYHSTFIGRAGLKNKGRISRYLANKCSIASRIDCFSEMQSAVFGEKLRQQVE 232
G +YHS + + + +R +A KC++A+R+D F E G +L+ ++E
Sbjct: 272 GYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVGYELKDEIE 325
>AL359644-1|CAH70729.1| 123|Homo sapiens stomatin protein.
Length = 123
Score = 30.7 bits (66), Expect = 5.9
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 581 CRYSEICFL*LLSATTLPANIWMLIK---STGEISIPMDIFEASMIACAFSESP 733
C + + F L + T P +IWM IK + GE++ + EASM+ +ESP
Sbjct: 30 CGWILVAFSFLFTVITFPISIWMCIKVIAAEGEMNASRALKEASMV---ITESP 80
>AL161784-1|CAH72706.1| 123|Homo sapiens stomatin protein.
Length = 123
Score = 30.7 bits (66), Expect = 5.9
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 581 CRYSEICFL*LLSATTLPANIWMLIK---STGEISIPMDIFEASMIACAFSESP 733
C + + F L + T P +IWM IK + GE++ + EASM+ +ESP
Sbjct: 30 CGWILVAFSFLFTVITFPISIWMCIKVIAAEGEMNASRALKEASMV---ITESP 80
>BC117417-1|AAI17418.1| 1222|Homo sapiens sortilin-related VPS10
domain containing receptor 3 protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 732 GDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMNSVAPN 553
G+S K +D+S +S D I +Q+ AG + + EY S++ S +PN
Sbjct: 952 GNSTKPLITLDSS-ISFTFLAEGTDTITVQVAAGNALIQDTKEIAVHEYFQSQLLSFSPN 1010
Query: 552 L 550
L
Sbjct: 1011 L 1011
>AL596118-1|CAH70023.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 732 GDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMNSVAPN 553
G+S K +D+S +S D I +Q+ AG + + EY S++ S +PN
Sbjct: 952 GNSTKPLITLDSS-ISFTFLAEGTDTITVQVAAGNALIQDTKEIAVHEYFQSQLLSFSPN 1010
Query: 552 L 550
L
Sbjct: 1011 L 1011
>AL445492-1|CAH70477.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 732 GDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMNSVAPN 553
G+S K +D+S +S D I +Q+ AG + + EY S++ S +PN
Sbjct: 952 GNSTKPLITLDSS-ISFTFLAEGTDTITVQVAAGNALIQDTKEIAVHEYFQSQLLSFSPN 1010
Query: 552 L 550
L
Sbjct: 1011 L 1011
>AL365449-1|CAH70813.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 732 GDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMNSVAPN 553
G+S K +D+S +S D I +Q+ AG + + EY S++ S +PN
Sbjct: 952 GNSTKPLITLDSS-ISFTFLAEGTDTITVQVAAGNALIQDTKEIAVHEYFQSQLLSFSPN 1010
Query: 552 L 550
L
Sbjct: 1011 L 1011
>AL358949-1|CAH72221.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 732 GDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMNSVAPN 553
G+S K +D+S +S D I +Q+ AG + + EY S++ S +PN
Sbjct: 952 GNSTKPLITLDSS-ISFTFLAEGTDTITVQVAAGNALIQDTKEIAVHEYFQSQLLSFSPN 1010
Query: 552 L 550
L
Sbjct: 1011 L 1011
>AL353900-2|CAI64579.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 732 GDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMNSVAPN 553
G+S K +D+S +S D I +Q+ AG + + EY S++ S +PN
Sbjct: 952 GNSTKPLITLDSS-ISFTFLAEGTDTITVQVAAGNALIQDTKEIAVHEYFQSQLLSFSPN 1010
Query: 552 L 550
L
Sbjct: 1011 L 1011
>AL161646-1|CAH70335.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 732 GDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMNSVAPN 553
G+S K +D+S +S D I +Q+ AG + + EY S++ S +PN
Sbjct: 952 GNSTKPLITLDSS-ISFTFLAEGTDTITVQVAAGNALIQDTKEIAVHEYFQSQLLSFSPN 1010
Query: 552 L 550
L
Sbjct: 1011 L 1011
>AB028982-1|BAA83011.2| 1222|Homo sapiens KIAA1059 protein protein.
Length = 1222
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -3
Query: 732 GDSEKAQAIIDASKMSMGMDISPVDLINIQMFAGRVVALSNYRKQISEYLHSKMNSVAPN 553
G+S K +D+S +S D I +Q+ AG + + EY S++ S +PN
Sbjct: 952 GNSTKPLITLDSS-ISFTFLAEGTDTITVQVAAGNALIQDTKEIAVHEYFQSQLLSFSPN 1010
Query: 552 L 550
L
Sbjct: 1011 L 1011
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,093,901
Number of Sequences: 237096
Number of extensions: 2178955
Number of successful extensions: 4370
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4368
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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