Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12n06r
(705 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX641080-1|CAE46039.1| 170|Homo sapiens hypothetical protein pr... 40 0.007
BC047482-1|AAH47482.1| 1494|Homo sapiens KIAA1219 protein. 40 0.007
BC018668-1|AAH18668.1| 423|Homo sapiens KIAA1219 protein protein. 40 0.007
BC010916-1|AAH10916.2| 221|Homo sapiens KIAA1219 protein protein. 40 0.007
AL834436-1|CAD39096.1| 1333|Homo sapiens hypothetical protein pr... 40 0.007
AL132998-1|CAB61346.1| 206|Homo sapiens hypothetical protein pr... 40 0.007
AL049868-3|CAM28345.1| 1323|Homo sapiens KIAA1219 protein. 40 0.007
AL049868-2|CAI23368.2| 1491|Homo sapiens KIAA1219 protein. 40 0.007
AL049868-1|CAM28344.1| 1494|Homo sapiens RP5-1100H13.1 protein. 40 0.007
AL035419-6|CAM27457.1| 1323|Homo sapiens KIAA1219 protein. 40 0.007
AL035419-4|CAM27456.1| 1491|Homo sapiens KIAA1219 protein. 40 0.007
AL035419-3|CAM27455.1| 1494|Homo sapiens RP5-1100H13.1 protein. 40 0.007
AB033045-1|BAA86533.3| 1534|Homo sapiens KIAA1219 protein protein. 40 0.007
M16768-1|AAA61110.1| 310|Homo sapiens TCRG protein. 33 1.3
M16804-1|AAA61124.1| 318|Homo sapiens TCRG protein. 30 7.0
>BX641080-1|CAE46039.1| 170|Homo sapiens hypothetical protein
protein.
Length = 170
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 125 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 161
>BC047482-1|AAH47482.1| 1494|Homo sapiens KIAA1219 protein.
Length = 1494
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 1449 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 1485
>BC018668-1|AAH18668.1| 423|Homo sapiens KIAA1219 protein protein.
Length = 423
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 378 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 414
>BC010916-1|AAH10916.2| 221|Homo sapiens KIAA1219 protein protein.
Length = 221
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 176 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 212
>AL834436-1|CAD39096.1| 1333|Homo sapiens hypothetical protein
protein.
Length = 1333
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 1288 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 1324
>AL132998-1|CAB61346.1| 206|Homo sapiens hypothetical protein
protein.
Length = 206
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 161 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 197
>AL049868-3|CAM28345.1| 1323|Homo sapiens KIAA1219 protein.
Length = 1323
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 1278 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 1314
>AL049868-2|CAI23368.2| 1491|Homo sapiens KIAA1219 protein.
Length = 1491
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 1446 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 1482
>AL049868-1|CAM28344.1| 1494|Homo sapiens RP5-1100H13.1 protein.
Length = 1494
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 1449 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 1485
>AL035419-6|CAM27457.1| 1323|Homo sapiens KIAA1219 protein.
Length = 1323
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 1278 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 1314
>AL035419-4|CAM27456.1| 1491|Homo sapiens KIAA1219 protein.
Length = 1491
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 1446 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 1482
>AL035419-3|CAM27455.1| 1494|Homo sapiens RP5-1100H13.1 protein.
Length = 1494
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 1449 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 1485
>AB033045-1|BAA86533.3| 1534|Homo sapiens KIAA1219 protein protein.
Length = 1534
Score = 40.3 bits (90), Expect = 0.007
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 683 TDLYQPPHVRRRHLIQELAQQFRQDLTEPELLESLFK 573
+D Y PPHVRR+ I ++ ++R EPE SLF+
Sbjct: 1489 SDSYSPPHVRRKQKITDIVNKYRNKQLEPEFYTSLFQ 1525
>M16768-1|AAA61110.1| 310|Homo sapiens TCRG protein.
Length = 310
Score = 32.7 bits (71), Expect = 1.3
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = -2
Query: 317 LQRLPHPSNRNTLLLHGRNRQGGGTYPCGLI*GPTRPWTSGPLVPKINVAYLPSEMSLKP 138
+ R+P S +TL +H +Q TY C L+ G + + L +++S KP
Sbjct: 91 VDRIPETST-STLTIHNVEKQDIATYYCALLEGNYKKLFGSGTTLVVTDKQLDADVSPKP 149
Query: 137 NFFLP 123
FLP
Sbjct: 150 TIFLP 154
>M16804-1|AAA61124.1| 318|Homo sapiens TCRG protein.
Length = 318
Score = 30.3 bits (65), Expect = 7.0
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -2
Query: 317 LQRLPHPSNRNTLLLHGRNRQGGGTYPCGLI*GPTRPWTSGPLVPKINVAYLPSEMSLKP 138
+ R+P S +TL +H +Q TY C L G + + L +++S KP
Sbjct: 67 VDRIPETST-STLTIHNVEKQDIATYYCALWEGYYKKLFGSGTTLVVTDKQLDADVSPKP 125
Query: 137 NFFLP 123
FLP
Sbjct: 126 TIFLP 130
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,963,516
Number of Sequences: 237096
Number of extensions: 2028917
Number of successful extensions: 4339
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4339
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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