Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12n06f
         (597 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB033045-1|BAA86533.3| 1534|Homo sapiens KIAA1219 protein protein.     43   7e-04
BC047482-1|AAH47482.1| 1494|Homo sapiens KIAA1219 protein.             43   0.001
AL049868-2|CAI23368.2| 1491|Homo sapiens KIAA1219 protein.             43   0.001
AL049868-1|CAM28344.1| 1494|Homo sapiens RP5-1100H13.1 protein.        43   0.001
AL035419-4|CAM27456.1| 1491|Homo sapiens KIAA1219 protein.             43   0.001
AL035419-3|CAM27455.1| 1494|Homo sapiens RP5-1100H13.1 protein.        43   0.001

>AB033045-1|BAA86533.3| 1534|Homo sapiens KIAA1219 protein protein.
          Length = 1534

 Score = 43.2 bits (97), Expect = 7e-04
 Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
 Frame = +1

Query: 265 SDGMYAEWSSIPL-------EXXXXXXXXXXXXRDVVLAVVKQLSSPDPSP--------L 399
           S  MY+EW S+ L                    R+V  AVV+ L     +P        L
Sbjct: 41  SGTMYSEWRSLHLVIQNDQGHTSVLHSYPESVGREVANAVVRPLGQVLGTPSVAGSENLL 100

Query: 400 TTDAEVEWVLEVIRYGLSLPLSEHSAVRDCVRVACAW 510
            TD EV+W +EVI YGL+LPL +   V+ CV V   W
Sbjct: 101 KTDKEVKWTMEVICYGLTLPL-DGETVKYCVDVYTDW 136


>BC047482-1|AAH47482.1| 1494|Homo sapiens KIAA1219 protein.
          Length = 1494

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
 Frame = +1

Query: 274 MYAEWSSIPL-------EXXXXXXXXXXXXRDVVLAVVKQLSSPDPSP--------LTTD 408
           MY+EW S+ L                    R+V  AVV+ L     +P        L TD
Sbjct: 1   MYSEWRSLHLVIQNDQGHTSVLHSYPESVGREVANAVVRPLGQVLGTPSVAGSENLLKTD 60

Query: 409 AEVEWVLEVIRYGLSLPLSEHSAVRDCVRVACAW 510
            EV+W +EVI YGL+LPL +   V+ CV V   W
Sbjct: 61  KEVKWTMEVICYGLTLPL-DGETVKYCVDVYTDW 93


>AL049868-2|CAI23368.2| 1491|Homo sapiens KIAA1219 protein.
          Length = 1491

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
 Frame = +1

Query: 274 MYAEWSSIPL-------EXXXXXXXXXXXXRDVVLAVVKQLSSPDPSP--------LTTD 408
           MY+EW S+ L                    R+V  AVV+ L     +P        L TD
Sbjct: 1   MYSEWRSLHLVIQNDQGHTSVLHSYPESVGREVANAVVRPLGQVLGTPSVAGSENLLKTD 60

Query: 409 AEVEWVLEVIRYGLSLPLSEHSAVRDCVRVACAW 510
            EV+W +EVI YGL+LPL +   V+ CV V   W
Sbjct: 61  KEVKWTMEVICYGLTLPL-DGETVKYCVDVYTDW 93


>AL049868-1|CAM28344.1| 1494|Homo sapiens RP5-1100H13.1 protein.
          Length = 1494

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
 Frame = +1

Query: 274 MYAEWSSIPL-------EXXXXXXXXXXXXRDVVLAVVKQLSSPDPSP--------LTTD 408
           MY+EW S+ L                    R+V  AVV+ L     +P        L TD
Sbjct: 1   MYSEWRSLHLVIQNDQGHTSVLHSYPESVGREVANAVVRPLGQVLGTPSVAGSENLLKTD 60

Query: 409 AEVEWVLEVIRYGLSLPLSEHSAVRDCVRVACAW 510
            EV+W +EVI YGL+LPL +   V+ CV V   W
Sbjct: 61  KEVKWTMEVICYGLTLPL-DGETVKYCVDVYTDW 93


>AL035419-4|CAM27456.1| 1491|Homo sapiens KIAA1219 protein.
          Length = 1491

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
 Frame = +1

Query: 274 MYAEWSSIPL-------EXXXXXXXXXXXXRDVVLAVVKQLSSPDPSP--------LTTD 408
           MY+EW S+ L                    R+V  AVV+ L     +P        L TD
Sbjct: 1   MYSEWRSLHLVIQNDQGHTSVLHSYPESVGREVANAVVRPLGQVLGTPSVAGSENLLKTD 60

Query: 409 AEVEWVLEVIRYGLSLPLSEHSAVRDCVRVACAW 510
            EV+W +EVI YGL+LPL +   V+ CV V   W
Sbjct: 61  KEVKWTMEVICYGLTLPL-DGETVKYCVDVYTDW 93


>AL035419-3|CAM27455.1| 1494|Homo sapiens RP5-1100H13.1 protein.
          Length = 1494

 Score = 42.7 bits (96), Expect = 0.001
 Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
 Frame = +1

Query: 274 MYAEWSSIPL-------EXXXXXXXXXXXXRDVVLAVVKQLSSPDPSP--------LTTD 408
           MY+EW S+ L                    R+V  AVV+ L     +P        L TD
Sbjct: 1   MYSEWRSLHLVIQNDQGHTSVLHSYPESVGREVANAVVRPLGQVLGTPSVAGSENLLKTD 60

Query: 409 AEVEWVLEVIRYGLSLPLSEHSAVRDCVRVACAW 510
            EV+W +EVI YGL+LPL +   V+ CV V   W
Sbjct: 61  KEVKWTMEVICYGLTLPL-DGETVKYCVDVYTDW 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,867,400
Number of Sequences: 237096
Number of extensions: 1490481
Number of successful extensions: 2881
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2881
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)