Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12n05f
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical p... 225 1e-59
Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical pr... 225 1e-59
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 33 0.15
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 33 0.15
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 33 0.15
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 33 0.15
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 33 0.15
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 29 3.2
U97003-1|AAB52270.2| 527|Caenorhabditis elegans Udp-glucuronosy... 28 5.6
U15167-1|AAB66360.1| 445|Caenorhabditis elegans serotonin recep... 28 5.6
AC084154-13|AAK29875.2| 445|Caenorhabditis elegans Serotonin/oc... 28 5.6
AF125442-12|AAD12797.1| 260|Caenorhabditis elegans Hypothetical... 27 7.4
U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical pr... 27 9.7
AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical... 27 9.7
>Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 225 bits (551), Expect = 1e-59
Identities = 99/152 (65%), Positives = 128/152 (84%)
Frame = +3
Query: 126 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVIGATSLDDMV 305
EADIA+IGLAVMGQNLILNMND G+ VCAFNRTV V++FL NEAKGTK+IGA S+++M
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62
Query: 306 SKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGIL 485
KLKRPR++++L+KAG VD + ++P L +GDIIIDGGNS+Y D+ + ++L+ GI+
Sbjct: 63 KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122
Query: 486 YVGMGVSGGEDGARYGPSLMPGGHPAAWPHIK 581
+VG GVSGGE+GAR+GPSLMPGG+P AWPH+K
Sbjct: 123 FVGCGVSGGEEGARFGPSLMPGGNPKAWPHLK 154
>Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 225 bits (551), Expect = 1e-59
Identities = 99/152 (65%), Positives = 128/152 (84%)
Frame = +3
Query: 126 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVIGATSLDDMV 305
EADIA+IGLAVMGQNLILNMND G+ VCAFNRTV V++FL NEAKGTK+IGA S+++M
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62
Query: 306 SKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGIL 485
KLKRPR++++L+KAG VD + ++P L +GDIIIDGGNS+Y D+ + ++L+ GI+
Sbjct: 63 KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122
Query: 486 YVGMGVSGGEDGARYGPSLMPGGHPAAWPHIK 581
+VG GVSGGE+GAR+GPSLMPGG+P AWPH+K
Sbjct: 123 FVGCGVSGGEEGARFGPSLMPGGNPKAWPHLK 154
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 339 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 476
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1004 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1050
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 339 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 476
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1533 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1579
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 339 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 476
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1214 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1260
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 339 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 476
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1004 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1050
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 339 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 476
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1533 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1579
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 339 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 476
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1214 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1260
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 339 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 476
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 423 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 469
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 390 LLSKGDIIIDGGNSQYLDTQKWCKELSGTGILYVGMGVSGGEDGARY 530
+++K ++ + G N YLDT+ + +E L +G+G+S G +Y
Sbjct: 655 VINKTNVKLGGSNYVYLDTKNFLQE-----HLIIGVGISSPPPGTKY 696
>U97003-1|AAB52270.2| 527|Caenorhabditis elegans
Udp-glucuronosyltransferase protein32 protein.
Length = 527
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 161 HNSQTYECNISFILRHFFKLD-FKSLSNYFKQFELFLCKTVNVFNQ 27
H+ Y + F R+ + + FK L+NYF LC T +F++
Sbjct: 475 HHMTPYSLKMPFYQRYHYDIFIFKFLTNYFIPVVFLLCVTKLIFSK 520
>U15167-1|AAB66360.1| 445|Caenorhabditis elegans serotonin receptor
precursor protein.
Length = 445
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 442 SKYCELPPSIIISPLLKSGISFFTNSSTANP 350
SK C LPP+++IS + +G + +S NP
Sbjct: 272 SKKCPLPPAVVISDIQANGGTGGKTNSIKNP 302
>AC084154-13|AAK29875.2| 445|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 4 protein.
Length = 445
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 442 SKYCELPPSIIISPLLKSGISFFTNSSTANP 350
SK C LPP+++IS + +G + +S NP
Sbjct: 272 SKKCPLPPAVVISDIQANGGTGGKTNSIKNP 302
>AF125442-12|AAD12797.1| 260|Caenorhabditis elegans Hypothetical
protein H04M03.12 protein.
Length = 260
Score = 27.5 bits (58), Expect = 7.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 149 TYECN-ISFILRHFFKLDFKSLSNYFKQFELFLCKTVNVFNQLF 21
TYE + I FI++ KL ++ +KQ LFL N F LF
Sbjct: 118 TYEMSFIKFIIQEISKLQHQTHFFLYKQNLLFLKHAKNCFTSLF 161
>U23139-1|AAK31493.2| 513|Caenorhabditis elegans Hypothetical
protein F13H8.5 protein.
Length = 513
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 321 PRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGILYVGMG 500
P + + +K+ +++D K P +II+DG S + DTQ+ + + T + VG
Sbjct: 237 PARFIPTLKSLYSIDPPRPKN-PSYKPDEIIVDGHRSYFEDTQRTRPQSTKTRVQSVGGS 295
Query: 501 V 503
V
Sbjct: 296 V 296
>AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical
protein Y39G10AR.15 protein.
Length = 704
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 276 IGATSLDDMVSKLKRPR 326
+G TSLDD SKL+RP+
Sbjct: 112 LGPTSLDDQNSKLERPK 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,141,887
Number of Sequences: 27780
Number of extensions: 265270
Number of successful extensions: 639
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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