Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12n01f
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 334 2e-92
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 325 2e-89
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 322 1e-88
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 322 1e-88
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 316 9e-87
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 316 1e-86
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 226 9e-60
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 226 9e-60
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 153 1e-37
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 153 1e-37
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 151 3e-37
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 151 4e-37
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 151 4e-37
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 151 4e-37
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 146 9e-36
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 146 9e-36
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 145 3e-35
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 145 3e-35
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 145 3e-35
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 144 5e-35
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 143 1e-34
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 142 3e-34
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 140 1e-33
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 122 2e-28
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 121 5e-28
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 121 5e-28
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 6.8
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 27 8.9
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 27 8.9
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 27 8.9
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 334 bits (822), Expect = 2e-92
Identities = 154/183 (84%), Positives = 162/183 (88%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVH+QAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
RKE+ESCDCLQGFQ KIREEYPDRIM T+SVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVV 180
Query: 620 EPY 628
EPY
Sbjct: 181 EPY 183
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 325 bits (798), Expect = 2e-89
Identities = 148/183 (80%), Positives = 159/183 (86%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
RKE+E CDCLQGFQ KIREEYPDRIM+++SVVPSPKVSDTVV
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVV 180
Query: 620 EPY 628
EPY
Sbjct: 181 EPY 183
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 322 bits (792), Expect = 1e-88
Identities = 148/183 (80%), Positives = 158/183 (86%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
RKE+ES DCLQGFQ KIREEYPDRIMNT+SVVPSPKVSDTVV
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 620 EPY 628
EPY
Sbjct: 181 EPY 183
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 322 bits (792), Expect = 1e-88
Identities = 148/183 (80%), Positives = 158/183 (86%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVH+QAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
RKE+ES DCLQGFQ KIREEYPDRIMNT+SVVPSPKVSDTVV
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 620 EPY 628
EPY
Sbjct: 181 EPY 183
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 316 bits (776), Expect = 9e-87
Identities = 142/183 (77%), Positives = 158/183 (86%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
RKE+E CDCLQGFQ KIREEYPDRIM+++SVVPSPKVSDTVV
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVV 180
Query: 620 EPY 628
EPY
Sbjct: 181 EPY 183
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 316 bits (775), Expect = 1e-86
Identities = 142/183 (77%), Positives = 158/183 (86%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
RKE+E CDCLQGFQ KIREE+PDRIM+++SVVPSPKVSDTVV
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVV 180
Query: 620 EPY 628
EPY
Sbjct: 181 EPY 183
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 226 bits (553), Expect = 9e-60
Identities = 104/191 (54%), Positives = 136/191 (71%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
R+E+E+ D L+GFQ K+REEY D+ ++T S++PS KVSDTVV
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVV 180
Query: 620 EPYKCDSLSSP 652
EPY LS P
Sbjct: 181 EPYNA-ILSMP 190
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 226 bits (553), Expect = 9e-60
Identities = 104/191 (54%), Positives = 136/191 (71%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
R+E+E+ D L+GFQ K+REEY D+ ++T S++PS KVSDTVV
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVV 180
Query: 620 EPYKCDSLSSP 652
EPY LS P
Sbjct: 181 EPYNA-ILSMP 190
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 153 bits (371), Expect = 1e-37
Identities = 68/183 (37%), Positives = 104/183 (56%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
R+ +++C LQGF ++ +Y + +S+ P+P+VS VV
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 620 EPY 628
EPY
Sbjct: 181 EPY 183
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 153 bits (370), Expect = 1e-37
Identities = 72/183 (39%), Positives = 108/183 (59%), Gaps = 1/183 (0%)
Frame = +2
Query: 83 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYV 259
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
RK++E+C+ LQGF ++ E+ + +SV P+P+VS +VV
Sbjct: 126 RKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVV 185
Query: 620 EPY 628
EPY
Sbjct: 186 EPY 188
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 151 bits (367), Expect = 3e-37
Identities = 73/185 (39%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 253
MREIV + GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 254 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 433
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 434 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 613
VR+ +E C LQGF ++ +Y + +S+ P+P++S +
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 614 VVEPY 628
+VEPY
Sbjct: 181 MVEPY 185
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 151 bits (366), Expect = 4e-37
Identities = 68/183 (37%), Positives = 105/183 (57%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
R+ +++C LQGF ++ +Y + +S+ P+P+VS VV
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 620 EPY 628
EPY
Sbjct: 181 EPY 183
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 151 bits (366), Expect = 4e-37
Identities = 67/183 (36%), Positives = 103/183 (56%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ + GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
R+ +++C LQGF ++ +Y + +S+ P+P+V VV
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVV 180
Query: 620 EPY 628
EPY
Sbjct: 181 EPY 183
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 151 bits (366), Expect = 4e-37
Identities = 68/183 (37%), Positives = 105/183 (57%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ + GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
R+ +++C LQGF ++ +Y + +S+ P+P+VS VV
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 620 EPY 628
EPY
Sbjct: 181 EPY 183
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 146 bits (355), Expect = 9e-36
Identities = 65/183 (35%), Positives = 103/183 (56%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
R+ +++C LQGF ++ +Y + +S+ P+P+VS VV
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 620 EPY 628
EPY
Sbjct: 181 EPY 183
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 146 bits (355), Expect = 9e-36
Identities = 65/183 (35%), Positives = 103/183 (56%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ + GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
R+ +++C LQGF ++ +Y + +S+ P+P+VS VV
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVV 180
Query: 620 EPY 628
EPY
Sbjct: 181 EPY 183
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 145 bits (351), Expect = 3e-35
Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 254 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 433
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 434 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 613
+R+ +++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 614 VVEPY 628
VVEPY
Sbjct: 181 VVEPY 185
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 145 bits (351), Expect = 3e-35
Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 254 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 433
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 434 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 613
+R+ +++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 614 VVEPY 628
VVEPY
Sbjct: 181 VVEPY 185
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 145 bits (351), Expect = 3e-35
Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 253
MRE++ + GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 254 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 433
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 434 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 613
+R+ +++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 614 VVEPY 628
VVEPY
Sbjct: 181 VVEPY 185
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 144 bits (349), Expect = 5e-35
Identities = 69/185 (37%), Positives = 107/185 (57%), Gaps = 3/185 (1%)
Frame = +2
Query: 83 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 253
RE++ + GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 254 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 433
+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 434 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDT 613
V++ +E+C+ LQGF ++ EY + +++ P+P+VS +
Sbjct: 127 RVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTS 186
Query: 614 VVEPY 628
+VEPY
Sbjct: 187 MVEPY 191
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 143 bits (346), Expect = 1e-34
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Frame = +2
Query: 83 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 256
RE++ + GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 257 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 436
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 437 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 616
+R+ +++C LQGF ++ +Y + +S+ P+P+VS V
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 617 VEPY 628
VEPY
Sbjct: 181 VEPY 184
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 142 bits (343), Expect = 3e-34
Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Frame = +2
Query: 77 KMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGG 250
+ RE++ + GQ G Q+G WE+ EHGI P G + + L ++ N +++E G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 251 KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 430
K+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 431 DVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSD 610
D VR+ E+C LQGF ++ +Y + + + P+P+VS
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVST 184
Query: 611 TVVEPY 628
++VEPY
Sbjct: 185 SMVEPY 190
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 140 bits (338), Expect = 1e-33
Identities = 64/183 (34%), Positives = 105/183 (57%)
Frame = +2
Query: 80 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 259
MRE++ + GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 260 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 439
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVV 619
R+ + +C+ LQGF ++ EY + +S+ P+P++S +VV
Sbjct: 120 RRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVV 179
Query: 620 EPY 628
EPY
Sbjct: 180 EPY 182
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 122 bits (295), Expect = 2e-28
Identities = 59/160 (36%), Positives = 93/160 (58%), Gaps = 3/160 (1%)
Frame = +2
Query: 158 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 328
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 329 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXX 508
+F P+ + G+ A N +A+G YT G E++D V+D V++ +E+C+ LQGF
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGT 123
Query: 509 XXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPY 628
++ EY + +++ P+P+VS ++VEPY
Sbjct: 124 GSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPY 163
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 121 bits (291), Expect = 5e-28
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 4/184 (2%)
Frame = +2
Query: 89 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 268
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 269 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 439
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS-DTV 616
+E+E+ + L G ++RE +P +++ TYSV + S D V
Sbjct: 125 IREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVV 184
Query: 617 VEPY 628
V PY
Sbjct: 185 VHPY 188
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 121 bits (291), Expect = 5e-28
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 4/184 (2%)
Frame = +2
Query: 89 IVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 268
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 269 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 439
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 440 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS-DTV 616
+E+E+ + L G ++RE +P +++ TYSV + S D V
Sbjct: 125 IREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVV 184
Query: 617 VEPY 628
V PY
Sbjct: 185 VHPY 188
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 146 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 283
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 568 HEHILSSPLAQSIRHCRRTIQMRLSQFT 651
H++IL P+ S RHC T QFT
Sbjct: 574 HDNILRRPVVVSFRHCASTFPRDNWQFT 601
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 568 HEHILSSPLAQSIRHCRRTIQMRLSQFT 651
H++IL P+ S RHC T QFT
Sbjct: 602 HDNILRRPVVVSFRHCASTFPRDNWQFT 629
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 568 HEHILSSPLAQSIRHCRRTIQMRLSQFT 651
H++IL P+ S RHC T QFT
Sbjct: 574 HDNILRRPVVVSFRHCASTFPRDNWQFT 601
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 489 IPSVAAPGPVWAPSSSQRSVKSTPTES*THTQ*SPRPKYQTLSSNHTNA 635
IPS+ + PV SSS S S P+ES + +P P +SN A
Sbjct: 1630 IPSIPSTLPVAPSSSSVPSSPSAPSESTSTVSETPAPVNVNPASNEHEA 1678
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,561,593
Number of Sequences: 27780
Number of extensions: 309592
Number of successful extensions: 928
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -