Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12m23f
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.1  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   4.6  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   4.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   4.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   8.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   8.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   8.0  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 21  VQREREAHNCVALIAIMKLLGFFLSWVSVCAIVSASEEGHIYCG 152
           V R+R  +   + I ++    FFL W      V  S+ G ++ G
Sbjct: 95  VFRKRRVNYKDSNIGLVVANAFFLLWTPAVIFVVLSKNGIVFAG 138


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 164 CQITPAIYVSFFAG 123
           CQ+TP I+V  + G
Sbjct: 41  CQVTPVIHVLQYPG 54



 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 241 RCCLLCRKSAANEAS 285
           R C+ C++S   EAS
Sbjct: 85  RSCMCCQESGEREAS 99


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 133 SSLADTIAHTETHDKKKP 80
           S  A+  AH  TH  +KP
Sbjct: 32  SQAANLTAHVRTHSGEKP 49


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 133 SSLADTIAHTETHDKKKP 80
           S  A+  AH  TH  +KP
Sbjct: 288 SQAANLTAHVRTHSGEKP 305


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -1

Query: 142 MCPSSLADTIAHTETHDKKKPSNF---IIAISAT 50
           +CP S+ + I   E H   K   +   I+A+S T
Sbjct: 22  LCPRSIDEKIKRQERHSFYKIYKYTYNIVAVSLT 55


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 148 QYMCPSSLADTIAHTETHDKK 86
           +Y C  SL   + H  TH+ K
Sbjct: 279 EYRCIFSLRPGLTHKYTHEIK 299


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 216 AHYAGYGWP 242
           A +A YGWP
Sbjct: 121 ATFASYGWP 129


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 216 AHYAGYGWP 242
           A +A YGWP
Sbjct: 121 ATFASYGWP 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,729
Number of Sequences: 336
Number of extensions: 2039
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)