Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12m21f
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    93   8e-21
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           26   0.82 
AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal glutath...    25   1.4  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   1.9  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   1.9  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   1.9  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.3  
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            23   5.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   5.8  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
            calcium/calmodulin-dependentprotein kinase, CAKI protein.
          Length = 872

 Score = 92.7 bits (220), Expect = 8e-21
 Identities = 39/126 (30%), Positives = 70/126 (55%)
 Frame = +2

Query: 224  RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 403
            R LVL G  G G+  +   L+ ++PDK+ + + HTTR PR  E+NG  Y+F + ++M   
Sbjct: 693  RTLVLLGAHGVGRRHIKNTLIAKYPDKYAYPIPHTTRPPRPDEENGRSYYFISHDEMMAD 752

Query: 404  IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPLLVFVMP 583
            I   E++E       +YGT  + +  +   GK+ +LD+E + +K ++  +  P +VF+  
Sbjct: 753  ISANEYLEYGTHEDAMYGTKLETIRRIHADGKMAILDVEPQALKILRTAEFTPYVVFIAA 812

Query: 584  PSIDEL 601
            P +  +
Sbjct: 813  PLLQNI 818


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = +3

Query: 303 SLASVSPIQQEHHGLV--KKTECIIISLT 383
           ++ASVS    +HH  +  +KTEC++IS T
Sbjct: 748 AVASVSHWMAQHHLQIAPEKTECVLISST 776


>AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal
           glutathione transferase GSTMIC3protein.
          Length = 147

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +2

Query: 476 DDVRRTGKICVLDIEMEGVKQIKRTDLDPLLVF 574
           +DV+  GK+   D ++E V++  R D++ +L +
Sbjct: 48  EDVKPGGKVAYDDPDVERVRRAHRNDMENILPY 80


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 209 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 298
           V K    L + G SG+GK+TLL  L    P
Sbjct: 122 VAKSGELLAVMGSSGAGKTTLLNALAFRSP 151


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 209 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 298
           V K    L + G SG+GK+TLL  L    P
Sbjct: 122 VAKSGELLAVMGSSGAGKTTLLNALAFRSP 151


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 209 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 298
           V K    L + G SG+GK+TLL  L    P
Sbjct: 100 VAKSGELLAVMGSSGAGKTTLLNALAFRSP 129


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = -2

Query: 556 QVCAFDLLHP--FHFNIQHTY--FASTTYIIYCFLACSINVSTENCSFYKFTF 410
           Q C F LL    F F ++ T   F  T+++IYCF++ S    +    F  F F
Sbjct: 5   QFCPFCLLFNLYFLFVVRGTGKPFLPTSFLIYCFVSPSCLECSSVPLFINFIF 57


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 230 LVLCGPSGSGKSTLLKRLLK 289
           LVL G S  GKS+L+ R +K
Sbjct: 27  LVLLGESAVGKSSLVLRFVK 46


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 236 LCGPSGSGKSTLLKRLLKEF 295
           + GP+GSGKS ++  +L  F
Sbjct: 99  IIGPNGSGKSNVIDSMLFVF 118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,740
Number of Sequences: 2352
Number of extensions: 12819
Number of successful extensions: 31
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)