Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12m21f
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical pr... 157 6e-39
U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical pr... 156 1e-38
U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 95 3e-20
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 95 5e-20
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 95 5e-20
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 95 5e-20
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 95 5e-20
U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila disc... 90 1e-18
AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein... 90 1e-18
AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like pr... 90 1e-18
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 87 9e-18
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 83 1e-16
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical p... 33 0.16
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 31 0.48
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 31 0.48
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 31 0.48
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 31 0.48
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 31 0.48
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 31 0.84
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 31 0.84
Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical pr... 30 1.1
AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transpor... 30 1.1
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 30 1.5
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 29 1.9
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 29 1.9
Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical p... 29 2.6
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z75537-2|CAA99835.1| 622|Caenorhabditis elegans Hypothetical pr... 29 2.6
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 29 2.6
U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein. 29 2.6
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 29 2.6
AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical ... 29 2.6
U40959-3|AAA81767.2| 445|Caenorhabditis elegans Hypothetical pr... 29 3.4
U28928-7|AAA68339.1| 665|Caenorhabditis elegans Peroxisomal mem... 29 3.4
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 29 3.4
Z99281-23|CAE18026.1| 302|Caenorhabditis elegans Hypothetical p... 28 5.9
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 28 5.9
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 28 5.9
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 28 5.9
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 28 5.9
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 28 5.9
Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical p... 27 7.8
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 27 7.8
U28928-8|AAA68340.1| 661|Caenorhabditis elegans Peroxisomal mem... 27 7.8
AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical ... 27 7.8
AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transpor... 27 7.8
>U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical
protein T03F1.8a protein.
Length = 216
Score = 157 bits (381), Expect = 6e-39
Identities = 72/129 (55%), Positives = 94/129 (72%), Gaps = 1/129 (0%)
Frame = +2
Query: 209 VQKGP-RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNL 385
++K P RP+VL GPSG GKST+L R ++E+P+ F FSVSHTTR PRAGE++G HY+FT
Sbjct: 19 IRKMPCRPIVLSGPSGGGKSTILTRAMQEYPNSFAFSVSHTTRQPRAGEEHGKHYYFTEK 78
Query: 386 NDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPL 565
M I+ EF+E A FSGN YGTSKK V ++ +GKICVLDIE++GV+ IK + LD
Sbjct: 79 EKMQEMIKNNEFLEFATFSGNTYGTSKKTVLEIENSGKICVLDIELQGVRNIKNSHLDAR 138
Query: 566 LVFVMPPSI 592
+ + PSI
Sbjct: 139 YILIRAPSI 147
>U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical
protein T03F1.8b protein.
Length = 205
Score = 156 bits (379), Expect = 1e-38
Identities = 70/123 (56%), Positives = 90/123 (73%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 403
RP+VL GPSG GKST+L R ++E+P+ F FSVSHTTR PRAGE++G HY+FT M
Sbjct: 14 RPIVLSGPSGGGKSTILTRAMQEYPNSFAFSVSHTTRQPRAGEEHGKHYYFTEKEKMQEM 73
Query: 404 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPLLVFVMP 583
I+ EF+E A FSGN YGTSKK V ++ +GKICVLDIE++GV+ IK + LD + +
Sbjct: 74 IKNNEFLEFATFSGNTYGTSKKTVLEIENSGKICVLDIELQGVRNIKNSHLDARYILIRA 133
Query: 584 PSI 592
PSI
Sbjct: 134 PSI 136
>U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily
assigned gene nameprotein 117 protein.
Length = 668
Score = 95.1 bits (226), Expect = 3e-20
Identities = 46/123 (37%), Positives = 68/123 (55%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 403
RP+VLCG G G L RLL+ V +T+R P+ GE NGVHYHF +
Sbjct: 471 RPIVLCGAEGVGCLKLRDRLLESDRITLACPVPYTSRTPKEGEFNGVHYHFVSKQKFHED 530
Query: 404 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPLLVFVMP 583
+ G+F+E + YGT+KK V +V GK CV+ ++ E + I+ D+ P ++F+
Sbjct: 531 AKSGKFVEFGEYQKFWYGTAKKDVVNVIERGKTCVMTLKAESLGAIRSPDIQPYIIFIAA 590
Query: 584 PSI 592
PS+
Sbjct: 591 PSL 593
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 94.7 bits (225), Expect = 5e-20
Identities = 38/123 (30%), Positives = 70/123 (56%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 403
+ LVL G G G+ + L+ P++F + + HTTR PR E +G HY+F M
Sbjct: 434 KTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTNEQMMAD 493
Query: 404 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPLLVFVMP 583
I+ E++E ++YGT + + ++ ++GKI +LD+E + +K ++ + P +VF+
Sbjct: 494 IQNNEYLEYGTHEESMYGTKLETIRNIHKSGKIAILDVEPQALKVLRTAEYSPFVVFIAA 553
Query: 584 PSI 592
P++
Sbjct: 554 PNL 556
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical protein
F17E5.1a protein.
Length = 961
Score = 94.7 bits (225), Expect = 5e-20
Identities = 38/123 (30%), Positives = 70/123 (56%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 403
+ LVL G G G+ + L+ P++F + + HTTR PR E +G HY+F M
Sbjct: 775 KTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTNEQMMAD 834
Query: 404 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPLLVFVMP 583
I+ E++E ++YGT + + ++ ++GKI +LD+E + +K ++ + P +VF+
Sbjct: 835 IQNNEYLEYGTHEESMYGTKLETIRNIHKSGKIAILDVEPQALKVLRTAEYSPFVVFIAA 894
Query: 584 PSI 592
P++
Sbjct: 895 PNL 897
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 94.7 bits (225), Expect = 5e-20
Identities = 38/123 (30%), Positives = 70/123 (56%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 403
+ LVL G G G+ + L+ P++F + + HTTR PR E +G HY+F M
Sbjct: 434 KTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTNEQMMAD 493
Query: 404 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPLLVFVMP 583
I+ E++E ++YGT + + ++ ++GKI +LD+E + +K ++ + P +VF+
Sbjct: 494 IQNNEYLEYGTHEESMYGTKLETIRNIHKSGKIAILDVEPQALKVLRTAEYSPFVVFIAA 553
Query: 584 PSI 592
P++
Sbjct: 554 PNL 556
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 94.7 bits (225), Expect = 5e-20
Identities = 38/123 (30%), Positives = 70/123 (56%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 403
+ LVL G G G+ + L+ P++F + + HTTR PR E +G HY+F M
Sbjct: 775 KTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTNEQMMAD 834
Query: 404 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPLLVFVMP 583
I+ E++E ++YGT + + ++ ++GKI +LD+E + +K ++ + P +VF+
Sbjct: 835 IQNNEYLEYGTHEESMYGTKLETIRNIHKSGKIAILDVEPQALKVLRTAEYSPFVVFIAA 894
Query: 584 PSI 592
P++
Sbjct: 895 PNL 897
>U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila discs
large homologprotein 1, isoform a protein.
Length = 967
Score = 89.8 bits (213), Expect = 1e-18
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 403
RP+++ G K + L+ P KF V HT+R PR GE NG Y+F N ++M
Sbjct: 770 RPVIILGAL---KDRINDELVNRDPSKFSSCVPHTSRPPREGEVNGRDYYFVNKHNMEED 826
Query: 404 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIK-RTDLDPLLVFVM 580
++ FIE F N+YGTS ++V DV G+ C+LD+ +++++ ++ P+ +F+
Sbjct: 827 VKNNLFIEAGQFQNNLYGTSIQSVRDVANQGRHCILDVSGNAIRRLQSNANIQPISIFIK 886
Query: 581 PPSIDEL 601
P S ++
Sbjct: 887 PSSAQQI 893
>AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein
DLG-1 protein.
Length = 967
Score = 89.8 bits (213), Expect = 1e-18
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 403
RP+++ G K + L+ P KF V HT+R PR GE NG Y+F N ++M
Sbjct: 770 RPVIILGAL---KDRINDELVNRDPSKFSSCVPHTSRPPREGEVNGRDYYFVNKHNMEED 826
Query: 404 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIK-RTDLDPLLVFVM 580
++ FIE F N+YGTS ++V DV G+ C+LD+ +++++ ++ P+ +F+
Sbjct: 827 VKNNLFIEAGQFQNNLYGTSIQSVRDVANQGRHCILDVSGNAIRRLQSNANIQPISIFIK 886
Query: 581 PPSIDEL 601
P S ++
Sbjct: 887 PSSAQQI 893
>AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like protein
DLG-1 protein.
Length = 967
Score = 89.8 bits (213), Expect = 1e-18
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 403
RP+++ G K + L+ P KF V HT+R PR GE NG Y+F N ++M
Sbjct: 770 RPVIILGAL---KDRINDELVNRDPSKFSSCVPHTSRPPREGEVNGRDYYFVNKHNMEED 826
Query: 404 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIK-RTDLDPLLVFVM 580
++ FIE F N+YGTS ++V DV G+ C+LD+ +++++ ++ P+ +F+
Sbjct: 827 VKNNLFIEAGQFQNNLYGTSIQSVRDVANQGRHCILDVSGNAIRRLQSNANIQPISIFIK 886
Query: 581 PPSIDEL 601
P S ++
Sbjct: 887 PSSAQQI 893
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 87.0 bits (206), Expect = 9e-18
Identities = 42/129 (32%), Positives = 73/129 (56%)
Frame = +2
Query: 212 QKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLND 391
+K R +VL G G G++ + ++ K F D+F ++ HT+R R E +GV+Y+FT+ ++
Sbjct: 340 KKRRRVVVLLGAPGVGRNEIRRQFFKVFADRFTNAIPHTSRPQRPNESDGVNYYFTSRSE 399
Query: 392 MSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPLLV 571
M IE+ E +E F N+YGT+ K+V G + +L ++ I+ + P+++
Sbjct: 400 MERMIERKEMLEYGEFRDNLYGTALKSVRKASEKGTV-LLTPHPLAIENIRTWEFAPIVI 458
Query: 572 FVMPPSIDE 598
FV PP E
Sbjct: 459 FVQPPEFGE 467
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 83.0 bits (196), Expect = 1e-16
Identities = 44/127 (34%), Positives = 65/127 (51%)
Frame = +2
Query: 218 GPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMS 397
G R LVL G G+G+ + LL+ P F V T+RA R GE G Y F ++
Sbjct: 282 GRRTLVLLGAVGTGRRDIKSMLLRLAPHYFSTIVPLTSRAQRPGEVEGREYQFVRKEEIY 341
Query: 398 TAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRTDLDPLLVFV 577
I +G +E +YGTS +V + R+G++CVLD + V + + P +V V
Sbjct: 342 QKIREGGMVEWGELDSQLYGTSADSVRNEIRSGRMCVLDAAPQSVNYLYNAEFMPFVVHV 401
Query: 578 MPPSIDE 598
+PP I+E
Sbjct: 402 VPPPIEE 408
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 53.6 bits (123), Expect = 1e-07
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +2
Query: 314 SVSHTTRAPRAGEKNGVHYHFTNLNDMSTAIEKGEFIETAIFSGNIYGTSK 466
+V +TTR PR GE +G HY F +++D + ++ G+ +E + G++YGT +
Sbjct: 231 TVPYTTRPPREGEVDGEHYRFVSVDDFNKLLDSGDLLENGTYQGHLYGTPR 281
>Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical
protein C39E9.13 protein.
Length = 354
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 328
L+ CGPSG+GK T +K LL+E +G V T
Sbjct: 40 LLFCGPSGAGKKTRIKCLLREL---YGVGVEKT 69
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 31.5 bits (68), Expect = 0.48
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 424 RNCNF-QWKHLWNKQESSR*CTSYWQNMCAG 513
+ CN +W+H W + S+ C S+W + C G
Sbjct: 470 KECNGGRWRHQWYFDKGSKKCFSFWYDGCKG 500
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +2
Query: 224 RPLVLCGPSGSGKS-TLLKRL 283
+PLVLCGP GSGK+ TLL L
Sbjct: 2531 KPLVLCGPPGSGKTMTLLAAL 2551
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 31.5 bits (68), Expect = 0.48
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 424 RNCNF-QWKHLWNKQESSR*CTSYWQNMCAG 513
+ CN +W+H W + S+ C S+W + C G
Sbjct: 470 KECNGGRWRHQWYFDKGSKKCFSFWYDGCKG 500
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 31.5 bits (68), Expect = 0.48
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 424 RNCNF-QWKHLWNKQESSR*CTSYWQNMCAG 513
+ CN +W+H W + S+ C S+W + C G
Sbjct: 470 KECNGGRWRHQWYFDKGSKKCFSFWYDGCKG 500
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +2
Query: 224 RPLVLCGPSGSGKS-TLLKRL 283
+PLVLCGP GSGK+ TLL L
Sbjct: 2531 KPLVLCGPPGSGKTMTLLAAL 2551
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein
C05A9.1 protein.
Length = 1283
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEF 295
R L L GPSGSGKST++ LL+ F
Sbjct: 1065 RTLALVGPSGSGKSTIIS-LLERF 1087
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 30.7 bits (66), Expect = 0.84
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 227 PLVLCGPSGSGKSTLLKRLLKE 292
PLVL GPSG GK+ L + L K+
Sbjct: 818 PLVLIGPSGVGKTALFRALAKQ 839
>Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical
protein ZK673.2 protein.
Length = 222
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTAIE 409
++L G +GSGK T+ + L++EF + GF+ R G + + +
Sbjct: 4 VLLSGAAGSGKGTIARMLVREF-EPLGFNYFAAGDFIRDHIARGTEFGVR----AQSFLN 58
Query: 410 KGEFIETAIFSGNIYGTSKKA 472
KGE + +I +G I KA
Sbjct: 59 KGEHVPDSILNGAILAEMLKA 79
>AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transporter
(pgp related)protein 6 protein.
Length = 668
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFG 310
+ LCGPSG GKST+ L + + K G
Sbjct: 456 VALCGPSGEGKSTITHLLERFYEPKSG 482
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 221 PRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSV 319
P+ ++LCGP G GK+ L K + E F FSV
Sbjct: 568 PQGILLCGPPGCGKTLLAKAVANETGMNF-FSV 599
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +2
Query: 371 HFTNLNDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRT 550
H NL + +++ E +ET +FS N VD + ++ LD+ + I+
Sbjct: 143 HACNLQTIPPSVDSLENLETVVFSNN--KLDSLGVDQFKNKKQLSYLDVSGNFITSIEEK 200
Query: 551 DLDPL 565
+PL
Sbjct: 201 AFEPL 205
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +2
Query: 371 HFTNLNDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIEMEGVKQIKRT 550
H NL + +++ E +ET +FS N VD + ++ LD+ + I+
Sbjct: 143 HACNLQTIPPSVDSLENLETVVFSNN--KLDSLGVDQFKNKKQLSYLDVSGNFITSIEEK 200
Query: 551 DLDPL 565
+PL
Sbjct: 201 AFEPL 205
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 479 DVRRTGKICVLDIEMEGVKQIKRTDLDPLLVFVMPPSIDEL 601
D+ G CVL ++ + ++KR + P+LV + S+ +L
Sbjct: 917 DITAQGLHCVLQVDQSAIDRLKRCRMFPILVKIRFKSVKQL 957
>Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 328
+ L GP+G+GKSTLLK L + G H+
Sbjct: 424 IALVGPNGAGKSTLLKLLCTDVMPTDGLIRRHS 456
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical protein
K08E7.9 protein.
Length = 1321
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFG 310
L L GPSG GKST++ LL+ F D G
Sbjct: 1108 LALVGPSGCGKSTVV-ALLERFYDTLG 1133
>Z75537-2|CAA99835.1| 622|Caenorhabditis elegans Hypothetical
protein F18E2.2 protein.
Length = 622
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTT 331
+ + GP+G GKSTLLK L+ + G H T
Sbjct: 433 IAIVGPNGVGKSTLLKLLIGKIDPNDGELRKHRT 466
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFG 310
L L GPSG GKST++ LL+ F D G
Sbjct: 1108 LALVGPSGCGKSTVV-ALLERFYDTLG 1133
>U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein.
Length = 535
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 328
+ L GP+G+GKSTLLK L + G H+
Sbjct: 423 IALVGPNGAGKSTLLKLLCTDVMPTDGLIRRHS 455
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 221 PRPLVLCGPSGSGKSTLLKRLLKE 292
P+ ++LCGP G GK+ L K + E
Sbjct: 568 PQGILLCGPPGCGKTLLAKAVANE 591
>AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 328
+ L GP+G+GKSTLLK L + G H+
Sbjct: 424 IALVGPNGAGKSTLLKLLCTDVMPTDGLIRRHS 456
>U40959-3|AAA81767.2| 445|Caenorhabditis elegans Hypothetical
protein B0310.3 protein.
Length = 445
Score = 28.7 bits (61), Expect = 3.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 367 MHSVFFTSPWCSCCMGDTEAKLVGKFF 287
M F +PW +CC T A +V ++F
Sbjct: 37 MEGNFLNNPWINCCFVTTYAGVVAQYF 63
>U28928-7|AAA68339.1| 665|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 1 protein.
Length = 665
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFP 298
R +++CGP+G GKS+L + L + +P
Sbjct: 473 RNVLVCGPNGCGKSSLFRTLGELWP 497
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/93 (22%), Positives = 42/93 (45%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 403
+ + L GPSG+GKSTL+ + + + + G + T + +HYH TN+ +
Sbjct: 578 KTIALVGPSGNGKSTLVSLIQQFYTPQSGRILIDGTPIQNI---DHLHYH-TNI---ALV 630
Query: 404 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKI 502
++ + +YG +D+ R ++
Sbjct: 631 AQEPTLFSGTVRENILYGLENGTDEDMMRVAEM 663
>Z99281-23|CAE18026.1| 302|Caenorhabditis elegans Hypothetical
protein Y57G11C.43 protein.
Length = 302
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDK 304
+++ G SGKST++ RL K+F +K
Sbjct: 4 IIVTGHPSSGKSTVVDRLAKKFEEK 28
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFG 310
+ L G SGSGKSTL++ L + F G
Sbjct: 579 VALVGSSGSGKSTLIRLLFRLFESTEG 605
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 328
+ +VL GP G+GK+ + + + E F F+VS T
Sbjct: 227 KAMVLAGPPGTGKTLIARAIASESSSTF-FTVSST 260
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 328
+ +VL GP G+GK+ + + + E F F+VS T
Sbjct: 227 KAMVLAGPPGTGKTLIARAIASESSSTF-FTVSST 260
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRL 283
+ L + GPSGSGKST++ L
Sbjct: 1031 KTLAIVGPSGSGKSTIISLL 1050
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRL 283
+ L + GPSGSGKST++ L
Sbjct: 1031 KTLAIVGPSGSGKSTIISLL 1050
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 328
+ +VL GP G+GK+ + + + E F F+VS T
Sbjct: 227 KAMVLAGPPGTGKTLIARAIASESSSTF-FTVSST 260
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFG 310
+ L G SGSGKSTL++ L + F G
Sbjct: 579 VALVGSSGSGKSTLIRLLFRLFESTEG 605
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFG 310
+ L G SGSGKSTL++ L + F G
Sbjct: 579 VALVGSSGSGKSTLIRLLFRLFESTEG 605
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFG 310
+ L G SGSGKSTL++ L + F G
Sbjct: 579 VALVGSSGSGKSTLIRLLFRLFESTEG 605
>Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical
protein Y57G11C.1 protein.
Length = 633
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEF 295
+ + L GPSG+GKSTL+ L+++F
Sbjct: 402 KTVALVGPSGNGKSTLVS-LIQQF 424
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKR-LLKEFPDKF 307
LVL G G+GK+T +KR L EF K+
Sbjct: 12 LVLVGDGGTGKTTFVKRHLTGEFEKKY 38
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical protein
T21E8.1b protein.
Length = 1204
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEF 295
+ L L GPSG GKST++ LL+ F
Sbjct: 986 KTLALVGPSGCGKSTIIS-LLERF 1008
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.1a protein.
Length = 1263
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEF 295
+ L L GPSG GKST++ LL+ F
Sbjct: 1045 KTLALVGPSGCGKSTIIS-LLERF 1067
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.2 protein.
Length = 1263
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 224 RPLVLCGPSGSGKSTLLKRLLKEF 295
+ L L GPSG GKST++ LL+ F
Sbjct: 1045 KTLALVGPSGCGKSTIIS-LLERF 1067
>U28928-8|AAA68340.1| 661|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 2 protein.
Length = 661
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 230 LVLCGPSGSGKSTLLKRLLKEFPDKFG 310
+++CGP+G GKS+L R+L E FG
Sbjct: 471 VLVCGPNGCGKSSLF-RVLGELWPLFG 496
>AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical
protein F52D2.6 protein.
Length = 838
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 220 PFLNHCSNKEFQER-G*GCYSVFSKR*NHKIWQWLLIFK 107
P C++ +R G C V++ N+K+W+WL +FK
Sbjct: 596 PVFTDCNDCPTPKRSGFNC-EVWTAEVNNKVWRWLSLFK 633
>AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transporter
(pgp related)protein 2 protein.
Length = 761
Score = 27.5 bits (58), Expect = 7.8
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = +2
Query: 215 KGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDM 394
K + L GPSG GKS+++ L++ F + SV T + N V+YH +
Sbjct: 540 KSGETVALVGPSGGGKSSIVS-LIEHFYEPDEGSV--TLDGVPIKDINHVYYH----QKV 592
Query: 395 STAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKIC-VLDIEME 526
+ ++ ++ +YG DD+ K+ V D ME
Sbjct: 593 ALVAQEPVLYNGSVRHNILYGCDFATEDDMLNASKMANVHDFVME 637
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,398,271
Number of Sequences: 27780
Number of extensions: 273465
Number of successful extensions: 942
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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