Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12m16r
(503 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10 pro... 212 5e-55
BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10 p... 212 5e-55
BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein. 212 5e-55
BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10 p... 212 5e-55
BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein. 212 5e-55
BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein. 212 5e-55
BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein. 212 5e-55
BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10 p... 212 5e-55
AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10 v... 210 2e-54
BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10 p... 203 2e-52
AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10 p... 138 8e-33
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 128 1e-29
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 123 4e-28
BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein. 94 3e-19
Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10 pro... 39 0.011
U66541-1|AAC51633.1| 1822|Homo sapiens beta4-integrin protein. 31 1.7
BC105109-1|AAI05110.1| 269|Homo sapiens CCAAT/enhancer binding ... 31 1.7
AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein. 31 1.7
BC103835-1|AAI03836.1| 691|Homo sapiens PR domain containing 1,... 31 2.3
U28835-1|AAA70335.1| 203|Homo sapiens GATA-4 protein. 31 3.0
S63168-1|AAB27293.1| 269|Homo sapiens CCAAT/enhancer-binding pr... 31 3.0
M83667-1|AAA59927.1| 269|Homo sapiens NF-IL6-beta protein protein. 31 3.0
EF064715-1|ABK41898.1| 789|Homo sapiens PR domain containing 1,... 31 3.0
BC103834-1|AAI03835.1| 691|Homo sapiens PR domain containing 1,... 31 3.0
BC103833-1|AAI03834.1| 691|Homo sapiens PR domain containing 1,... 31 3.0
BC103832-1|AAI03833.1| 691|Homo sapiens PR domain containing 1,... 31 3.0
AY198415-1|AAO45624.1| 691|Homo sapiens PR domain-containing pr... 31 3.0
AY198414-1|AAO45623.1| 789|Homo sapiens PR domain-containing pr... 31 3.0
AL358952-2|CAI18902.1| 789|Homo sapiens PR domain containing 1,... 31 3.0
AL022067-3|CAI42296.1| 789|Homo sapiens PR domain containing 1,... 31 3.0
AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens ... 31 3.0
AF084199-1|AAC33300.1| 789|Homo sapiens beta-interferon gene po... 31 3.0
AK123755-1|BAC85688.1| 258|Homo sapiens rCS1a) mRNA. protein. 30 5.3
L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related prote... 29 7.0
BX641127-1|CAE46057.1| 191|Homo sapiens hypothetical protein pr... 29 7.0
BX640751-1|CAE45859.1| 590|Homo sapiens hypothetical protein pr... 29 7.0
AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related pro... 29 7.0
AB209888-1|BAD93125.1| 317|Homo sapiens natural killer-tumor re... 29 7.0
Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protei... 29 9.2
CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein. 29 9.2
BC046200-1|AAH46200.1| 251|Homo sapiens chromosome 17 open read... 29 9.2
BC022546-1|AAH22546.1| 309|Homo sapiens WBP2 N-terminal like pr... 29 9.2
BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein. 29 9.2
AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding prot... 29 9.2
AF544983-1|AAQ11748.1| 158|Homo sapiens cilia-associated protei... 29 9.2
>U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 212 bits (518), Expect = 5e-55
Identities = 108/161 (67%), Positives = 122/161 (75%), Gaps = 7/161 (4%)
Frame = -1
Query: 464 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 291
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 290 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 123
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 122 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYG 3
DR YRR+ PG DKKA+ G GSA + +F+GG+G
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFG 157
>BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 212 bits (518), Expect = 5e-55
Identities = 108/161 (67%), Positives = 122/161 (75%), Gaps = 7/161 (4%)
Frame = -1
Query: 464 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 291
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 290 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 123
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 122 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYG 3
DR YRR+ PG DKKA+ G GSA + +F+GG+G
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFG 157
>BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 212 bits (518), Expect = 5e-55
Identities = 108/161 (67%), Positives = 122/161 (75%), Gaps = 7/161 (4%)
Frame = -1
Query: 464 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 291
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 290 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 123
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 122 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYG 3
DR YRR+ PG DKKA+ G GSA + +F+GG+G
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFG 157
>BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 212 bits (518), Expect = 5e-55
Identities = 108/161 (67%), Positives = 122/161 (75%), Gaps = 7/161 (4%)
Frame = -1
Query: 464 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 291
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 290 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 123
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 122 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYG 3
DR YRR+ PG DKKA+ G GSA + +F+GG+G
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFG 157
>BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 212 bits (518), Expect = 5e-55
Identities = 108/161 (67%), Positives = 122/161 (75%), Gaps = 7/161 (4%)
Frame = -1
Query: 464 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 291
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 290 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 123
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 122 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYG 3
DR YRR+ PG DKKA+ G GSA + +F+GG+G
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFG 157
>BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 212 bits (518), Expect = 5e-55
Identities = 108/161 (67%), Positives = 122/161 (75%), Gaps = 7/161 (4%)
Frame = -1
Query: 464 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 291
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 290 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 123
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 122 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYG 3
DR YRR+ PG DKKA+ G GSA + +F+GG+G
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFG 157
>BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 212 bits (518), Expect = 5e-55
Identities = 108/161 (67%), Positives = 122/161 (75%), Gaps = 7/161 (4%)
Frame = -1
Query: 464 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 291
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 290 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 123
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 122 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYG 3
DR YRR+ PG DKKA+ G GSA + +F+GG+G
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFG 157
>BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 212 bits (518), Expect = 5e-55
Identities = 108/161 (67%), Positives = 122/161 (75%), Gaps = 7/161 (4%)
Frame = -1
Query: 464 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 291
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 290 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 123
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 122 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYG 3
DR YRR+ PG DKKA+ G GSA + +F+GG+G
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFG 157
>AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10
variant protein.
Length = 174
Score = 210 bits (513), Expect = 2e-54
Identities = 107/162 (66%), Positives = 122/162 (75%), Gaps = 7/162 (4%)
Frame = -1
Query: 467 KMLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVK 294
+MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVK
Sbjct: 9 QMLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVK 68
Query: 293 EQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPA 126
EQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPA L+RS R ET R P G RP
Sbjct: 69 EQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPAILRRS-RPETGRPRPKGLEGERPARLT 127
Query: 125 RSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA-DLEFKGGYG 3
R DR YRR+ PG DKKA+ G GSA + +F+GG+G
Sbjct: 128 RGEADRDTYRRSAVPPGA---DKKAEAGAGSATEFQFRGGFG 166
>BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10
protein.
Length = 172
Score = 203 bits (496), Expect = 2e-52
Identities = 104/151 (68%), Positives = 114/151 (75%), Gaps = 6/151 (3%)
Frame = -1
Query: 464 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 291
MLMPK+NR+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 290 QFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVG----RPDAPAR 123
QFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R P G RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLEGERPARLTR 119
Query: 122 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSA 30
DR YRR+ PG DKKA+ G GSA
Sbjct: 120 GEADRDTYRRSAVPPGA---DKKAEAGAGSA 147
>AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10
protein.
Length = 78
Score = 138 bits (335), Expect = 8e-33
Identities = 63/78 (80%), Positives = 69/78 (88%), Gaps = 2/78 (2%)
Frame = -1
Query: 443 RVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHF 270
R+AIYE LFKEGVMVAKKD H PKH EL + +PNL V+KAMQSLKSRGYVKEQFAWRHF
Sbjct: 1 RIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHF 60
Query: 269 YWYLTNEGIEYLRIFLHL 216
YWYLTNEGI+YLR +LHL
Sbjct: 61 YWYLTNEGIQYLRDYLHL 78
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 128 bits (309), Expect = 1e-29
Identities = 73/140 (52%), Positives = 92/140 (65%), Gaps = 16/140 (11%)
Frame = -1
Query: 464 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPK-HTELEKIPNLQVIKAMQSLKSRGYVKEQ 288
MLMP+ AIYE LF+EGVMVAKKD H + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 287 FAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKR----------SVRTETVR--RGPVG 144
FAW HFYWYLTNEGI +LR +LHLPPEIVPA+L+R + RT V+ +GP+G
Sbjct: 65 FAWCHFYWYLTNEGIAHLRQYLHLPPEIVPASLQRVRRPVAMVMPARRTPHVQAVQGPLG 124
Query: 143 RPDAPARS---AEDRSAYRR 93
P P R E++ YRR
Sbjct: 125 SP--PKRGPLPTEEQRVYRR 142
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 123 bits (296), Expect = 4e-28
Identities = 71/140 (50%), Positives = 91/140 (65%), Gaps = 16/140 (11%)
Frame = -1
Query: 464 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPK-HTELEKIPNLQVIKAMQSLKSRGYVKEQ 288
MLMP+ AIYE LF+EGVMVAKKD H + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 287 FAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKR----------SVRTETVR--RGPVG 144
FAW HF+WYLTNEGI +LR +LHLPPEIV A+L+R + RT V+ +GP+G
Sbjct: 65 FAWCHFFWYLTNEGIAHLRQYLHLPPEIVAASLQRVRRPVAMVMPARRTPHVQAVQGPLG 124
Query: 143 RPDAPARS---AEDRSAYRR 93
P P R E++ YRR
Sbjct: 125 SP--PKRGPLPTEEQRLYRR 142
>BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein.
Length = 72
Score = 93.9 bits (223), Expect = 3e-19
Identities = 46/60 (76%), Positives = 51/60 (85%), Gaps = 2/60 (3%)
Frame = -1
Query: 464 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTEL--EKIPNLQVIKAMQSLKSRGYVKE 291
MLMPK+N +AIYE LFKEGVMVAKKD H PKH EL + PNL+V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNWIAIYELLFKEGVMVAKKDVHMPKHPELADKNAPNLRVMKAMQSLKSRGYVKE 60
>Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10
protein.
Length = 58
Score = 38.7 bits (86), Expect = 0.011
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 143 RPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG-SADLEFKGGYG 3
RP R DR YRR+ PG DKKA+ G G + +F+GG+G
Sbjct: 7 RPARLTRGEADRDTYRRSAVPPGA---DKKAEAGLGQQPEFQFRGGFG 51
>U66541-1|AAC51633.1| 1822|Homo sapiens beta4-integrin protein.
Length = 1822
Score = 31.5 bits (68), Expect = 1.7
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -1
Query: 260 LTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYR-RTPA 84
L E ++ R+ LPPE++P S R+ P G PD + S R TP
Sbjct: 1378 LLGEELDLRRVTWRLPPELIPRLSASSGRSSDA-EAPHGPPDDGGAGGKGGSLPRSATPG 1436
Query: 83 APGVAPHDKKADVG-PGSAD 27
PG + + D PGS +
Sbjct: 1437 PPGEHLVNGRMDFAFPGSTN 1456
>BC105109-1|AAI05110.1| 269|Homo sapiens CCAAT/enhancer binding
protein (C/EBP), delta protein.
Length = 269
Score = 31.5 bits (68), Expect = 1.7
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = -1
Query: 215 PPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG 36
P ++PA + +T V G+P P RS+ R+TP APG A GP
Sbjct: 131 PGSLLPAQVAACAQT-VVSLAAAGQPTPPTSPEPPRSSPRQTP-APGPAREKSAGKRGPD 188
Query: 35 SADLEFK 15
E++
Sbjct: 189 RGSPEYR 195
>AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein.
Length = 1873
Score = 31.5 bits (68), Expect = 1.7
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -1
Query: 260 LTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYR-RTPA 84
L E ++ R+ LPPE++P S R+ P G PD + S R TP
Sbjct: 1377 LLGEELDLRRVTWRLPPELIPRLSASSGRSSDA-EAPHGPPDDGGAGGKGGSLPRSATPG 1435
Query: 83 APGVAPHDKKADVG-PGSAD 27
PG + + D PGS +
Sbjct: 1436 PPGEHLVNGRMDFAFPGSTN 1455
>BC103835-1|AAI03836.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 31.1 bits (67), Expect = 2.3
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 218 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 42
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 41 PGSADLEFKGGY 6
PGS + Y
Sbjct: 231 PGSQEHRDSNAY 242
>U28835-1|AAA70335.1| 203|Homo sapiens GATA-4 protein.
Length = 203
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 10 PPLNSRSAEPGPTSAFLS*GATPGAAGVRLYADLSSAERAGASGR 144
PP++ R + PGPT + + A A Y+ A AG +GR
Sbjct: 101 PPVSPRFSFPGPTGSLAAAAAAAAAREAAAYSSGGGAAGAGLAGR 145
>S63168-1|AAB27293.1| 269|Homo sapiens CCAAT/enhancer-binding
protein delta protein.
Length = 269
Score = 30.7 bits (66), Expect = 3.0
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = -1
Query: 215 PPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG 36
P ++PA + +T V G+P P RS+ R+TP APG A GP
Sbjct: 131 PGSLLPAQVGPCAQT-VVSLAAAGQPTPPTSPEPPRSSPRQTP-APGPAREKSAGKRGPD 188
Query: 35 SADLEFK 15
E++
Sbjct: 189 RGSPEYR 195
>M83667-1|AAA59927.1| 269|Homo sapiens NF-IL6-beta protein protein.
Length = 269
Score = 30.7 bits (66), Expect = 3.0
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = -1
Query: 215 PPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG 36
P ++PA + +T V G+P P RS+ R+TP APG A GP
Sbjct: 131 PGSLLPAQVGPCAQT-VVSLAAAGQPTPPTSPEPPRSSPRQTP-APGPAREKSAGKRGPD 188
Query: 35 SADLEFK 15
E++
Sbjct: 189 RGSPEYR 195
>EF064715-1|ABK41898.1| 789|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 789
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 218 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 42
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 41 PGSAD 27
PGS +
Sbjct: 329 PGSQE 333
>BC103834-1|AAI03835.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 218 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 42
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 41 PGSAD 27
PGS +
Sbjct: 231 PGSQE 235
>BC103833-1|AAI03834.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 218 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 42
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 41 PGSAD 27
PGS +
Sbjct: 231 PGSQE 235
>BC103832-1|AAI03833.1| 691|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 691
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 218 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 42
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 41 PGSAD 27
PGS +
Sbjct: 231 PGSQE 235
>AY198415-1|AAO45624.1| 691|Homo sapiens PR domain-containing
protein 1 beta protein.
Length = 691
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 218 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 42
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 171 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 230
Query: 41 PGSAD 27
PGS +
Sbjct: 231 PGSQE 235
>AY198414-1|AAO45623.1| 789|Homo sapiens PR domain-containing
protein 1 alpha protein.
Length = 789
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 218 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 42
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 41 PGSAD 27
PGS +
Sbjct: 329 PGSQE 333
>AL358952-2|CAI18902.1| 789|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 789
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 218 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 42
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 41 PGSAD 27
PGS +
Sbjct: 329 PGSQE 333
>AL022067-3|CAI42296.1| 789|Homo sapiens PR domain containing 1,
with ZNF domain protein.
Length = 789
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 218 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 42
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 41 PGSAD 27
PGS +
Sbjct: 329 PGSQE 333
>AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ44846 fis, clone BRACE3051144. ).
Length = 195
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +3
Query: 198 RHNFRRKVQEYSQVFNTLIG*VPVKVPPGKLFFDITSGLE*LHSFDNLEVRNLL 359
RH + ++ +++ + +G VPV++ PGKL TSG E L +++V ++L
Sbjct: 118 RHALQGQMVVIAEILDPHVGEVPVEMSPGKL-LPATSGPERLPGLHDVKVGHIL 170
>AF084199-1|AAC33300.1| 789|Homo sapiens beta-interferon gene
positive-regulatory domain I binding factor protein.
Length = 789
Score = 30.7 bits (66), Expect = 3.0
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -1
Query: 218 LPPEIVPATLKRSVRTET-VRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVG 42
LP + + A+L + T + R P+ P+ SA ++P +P + + VG
Sbjct: 269 LPEDFLKASLAYGIERPTYITRSPIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVG 328
Query: 41 PGSAD 27
PGS +
Sbjct: 329 PGSQE 333
>AK123755-1|BAC85688.1| 258|Homo sapiens rCS1a) mRNA. protein.
Length = 258
Score = 29.9 bits (64), Expect = 5.3
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +1
Query: 10 PPLNSRSAEPGPTSAFLS*GATPGAAGVRLYAD-LSSAERAGASGRPTGP-RRTVSVRTE 183
PP+ S S+ P GA+PG SS R+G + RPT P T R+
Sbjct: 66 PPVRSLSSGPPRAPRLSPAGASPGPQSASSRGQRASSPARSGRASRPTSPAESTAPPRSP 125
Query: 184 RLS 192
R S
Sbjct: 126 RTS 128
>L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related protein
protein.
Length = 1462
Score = 29.5 bits (63), Expect = 7.0
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -1
Query: 188 KRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSAD 27
KRSV + R PV RP+ E+R RR P K DV P +D
Sbjct: 268 KRSVDSSAKREKPVVRPEEIPPVPENRFLLRRDMPVVTAEPEPKIPDVAPIVSD 321
>BX641127-1|CAE46057.1| 191|Homo sapiens hypothetical protein
protein.
Length = 191
Score = 29.5 bits (63), Expect = 7.0
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -1
Query: 188 KRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSAD 27
KRSV + R PV RP+ E+R RR P K DV P +D
Sbjct: 15 KRSVDSSAKREKPVVRPEEIPPVPENRFLLRRDMPVVTAEPEPKIPDVAPIVSD 68
>BX640751-1|CAE45859.1| 590|Homo sapiens hypothetical protein
protein.
Length = 590
Score = 29.5 bits (63), Expect = 7.0
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -1
Query: 188 KRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSAD 27
KRSV + R PV RP+ E+R RR P K DV P +D
Sbjct: 15 KRSVDSSAKREKPVVRPEEIPPVPENRFLLRRDMPVVTAEPEPKIPDVAPIVSD 68
>AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related
protein protein.
Length = 1462
Score = 29.5 bits (63), Expect = 7.0
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -1
Query: 188 KRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSAD 27
KRSV + R PV RP+ E+R RR P K DV P +D
Sbjct: 268 KRSVDSSAKREKPVVRPEEIPPVPENRFLLRRDMPVVTAEPEPKIPDVAPIVSD 321
>AB209888-1|BAD93125.1| 317|Homo sapiens natural killer-tumor
recognition sequence variant protein.
Length = 317
Score = 29.5 bits (63), Expect = 7.0
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -1
Query: 188 KRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSAD 27
KRSV + R PV RP+ E+R RR P K DV P +D
Sbjct: 148 KRSVDSSAKREKPVVRPEEIPPVPENRFLLRRDMPVVTAEPEPKIPDVAPIVSD 201
>Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protein 1
protein.
Length = 701
Score = 29.1 bits (62), Expect = 9.2
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -1
Query: 212 PEIVPATLK-RSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG 36
P+ +P L S+R TV P PAR RS +PA+PG A + P
Sbjct: 602 PQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPA 661
Query: 35 SADL 24
DL
Sbjct: 662 QVDL 665
>CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein.
Length = 701
Score = 29.1 bits (62), Expect = 9.2
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -1
Query: 212 PEIVPATLK-RSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG 36
P+ +P L S+R TV P PAR RS +PA+PG A + P
Sbjct: 602 PQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPA 661
Query: 35 SADL 24
DL
Sbjct: 662 QVDL 665
>BC046200-1|AAH46200.1| 251|Homo sapiens chromosome 17 open reading
frame 82 protein.
Length = 251
Score = 29.1 bits (62), Expect = 9.2
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -1
Query: 197 ATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA 30
A L VR+ + G RP AP ++DR+A PA G +P PGSA
Sbjct: 39 AVLGPEVRSTGGQAGSRRRPSAPC--SQDRAAAEGAPALLGGSPSSGSPGHPPGSA 92
>BC022546-1|AAH22546.1| 309|Homo sapiens WBP2 N-terminal like
protein.
Length = 309
Score = 29.1 bits (62), Expect = 9.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 152 PVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGP 39
P+G PA + + YR +PA G PH+ A P
Sbjct: 256 PLGYGAPPAGNEGPPAGYRASPAGSGARPHESTAAQAP 293
>BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein.
Length = 621
Score = 29.1 bits (62), Expect = 9.2
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -1
Query: 212 PEIVPATLK-RSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG 36
P+ +P L S+R TV P PAR RS +PA+PG A + P
Sbjct: 522 PQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPA 581
Query: 35 SADL 24
DL
Sbjct: 582 QVDL 585
>AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding protein
1 protein.
Length = 632
Score = 29.1 bits (62), Expect = 9.2
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -1
Query: 212 PEIVPATLK-RSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG 36
P+ +P L S+R TV P PAR RS +PA+PG A + P
Sbjct: 533 PQALPRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPA 592
Query: 35 SADL 24
DL
Sbjct: 593 QVDL 596
>AF544983-1|AAQ11748.1| 158|Homo sapiens cilia-associated protein
protein.
Length = 158
Score = 29.1 bits (62), Expect = 9.2
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -1
Query: 185 RSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPG 36
RS RT RR P P P +A + RR P A P A+ PG
Sbjct: 7 RSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVP-GAAAEEAPG 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,952,286
Number of Sequences: 237096
Number of extensions: 1565158
Number of successful extensions: 5855
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 4901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5769
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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