Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12m13r
(376 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p pro... 108 2e-24
AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB... 108 2e-24
AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA... 108 2e-24
U03289-1|AAA03464.1| 113|Drosophila melanogaster protein ( Dros... 97 9e-21
BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p pro... 27 5.9
AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p pro... 27 5.9
AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB... 27 5.9
AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC... 27 5.9
AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC... 27 5.9
AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB... 27 5.9
AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA... 27 5.9
AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA... 27 5.9
Y09430-1|CAA70581.1| 4151|Drosophila melanogaster Kakapo protein. 27 7.9
AY122181-1|AAM52693.1| 1140|Drosophila melanogaster LD39385p pro... 27 7.9
AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short stop/K... 27 7.9
AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P... 27 7.9
AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-P... 27 7.9
AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-P... 27 7.9
AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-P... 27 7.9
AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-P... 27 7.9
AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-P... 27 7.9
>AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p
protein.
Length = 117
Score = 108 bits (260), Expect = 2e-24
Identities = 57/89 (64%), Positives = 61/89 (68%)
Frame = -2
Query: 360 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLYKE 181
MPPKKDAK+SAKQPQ KLNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 180 VPQYKLITPAVVSERLKVRGSLARRALIE 94
VP YKLITP+VVSERLK+RGSLA+RALIE
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIE 89
>AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB,
isoform B protein.
Length = 117
Score = 108 bits (260), Expect = 2e-24
Identities = 57/89 (64%), Positives = 61/89 (68%)
Frame = -2
Query: 360 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLYKE 181
MPPKKDAK+SAKQPQ KLNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 180 VPQYKLITPAVVSERLKVRGSLARRALIE 94
VP YKLITP+VVSERLK+RGSLA+RALIE
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIE 89
>AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA,
isoform A protein.
Length = 117
Score = 108 bits (260), Expect = 2e-24
Identities = 57/89 (64%), Positives = 61/89 (68%)
Frame = -2
Query: 360 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLYKE 181
MPPKKDAK+SAKQPQ KLNNQVLFDK TYEKLYKE
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 180 VPQYKLITPAVVSERLKVRGSLARRALIE 94
VP YKLITP+VVSERLK+RGSLA+RALIE
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIE 89
>U03289-1|AAA03464.1| 113|Drosophila melanogaster protein (
Drosophila melanogasterSevelin ribosomal protein homolog
gene, partial cds. ).
Length = 113
Score = 96.7 bits (230), Expect = 9e-21
Identities = 52/85 (61%), Positives = 56/85 (65%)
Frame = -2
Query: 348 KDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLYKEVPQY 169
KDAK+SAKQPQ KLNNQVLFDK TYEKLYKEVP Y
Sbjct: 1 KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 60
Query: 168 KLITPAVVSERLKVRGSLARRALIE 94
KLITP+VVSERLK+RGSL +RALIE
Sbjct: 61 KLITPSVVSERLKIRGSLDKRALIE 85
>BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p
protein.
Length = 1313
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 95 SMSALLAREPRTFNLSDTTAGVISLYCG-TSLYSFSYVGLS 214
++S LL + R F+L +T G+I L C S+ F+Y S
Sbjct: 134 AISTLLLDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHS 174
>AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p
protein.
Length = 607
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 329 PNSLKKHRRRRKDPVAAKPRRRSGP 255
P+S + R R+ P++ PRRRS P
Sbjct: 128 PHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB,
isoform B protein.
Length = 379
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 212 SNNTWLFNLSRTFPLDHFF-FLALPPPDPSF 301
+NN L L+R LDH + LPPP+ +F
Sbjct: 189 ANNAALLFLARPLKLDHHIGLICLPPPNRNF 219
>AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC,
isoform C protein.
Length = 1022
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 212 SNNTWLFNLSRTFPLDHFF-FLALPPPDPSF 301
+NN L L+R LDH + LPPP+ +F
Sbjct: 189 ANNAALLFLARPLKLDHHIGLICLPPPNRNF 219
>AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC,
isoform C protein.
Length = 567
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 329 PNSLKKHRRRRKDPVAAKPRRRSGP 255
P+S + R R+ P++ PRRRS P
Sbjct: 88 PHSRSRSRLRKSPPLSPPPRRRSPP 112
>AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB,
isoform B protein.
Length = 607
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 329 PNSLKKHRRRRKDPVAAKPRRRSGP 255
P+S + R R+ P++ PRRRS P
Sbjct: 128 PHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA,
isoform A protein.
Length = 607
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 329 PNSLKKHRRRRKDPVAAKPRRRSGP 255
P+S + R R+ P++ PRRRS P
Sbjct: 128 PHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA
protein.
Length = 1313
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 95 SMSALLAREPRTFNLSDTTAGVISLYCG-TSLYSFSYVGLS 214
++S LL + R F+L +T G+I L C S+ F+Y S
Sbjct: 134 AISTLLLDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHS 174
>Y09430-1|CAA70581.1| 4151|Drosophila melanogaster Kakapo protein.
Length = 4151
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 109 KSTHRXLGKKVSSNR*SNTMGR*SNTRATKGDDPV 5
K THR LG K S + G+ RA KGD PV
Sbjct: 3254 KETHRQLGAKQSVYDGTMRTGKNLLERAPKGDRPV 3288
>AY122181-1|AAM52693.1| 1140|Drosophila melanogaster LD39385p
protein.
Length = 1140
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 109 KSTHRXLGKKVSSNR*SNTMGR*SNTRATKGDDPV 5
K THR LG K S + G+ RA KGD PV
Sbjct: 241 KETHRQLGAKQSVYDGTMRTGKNLLERAPKGDRPV 275
>AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short stop/Kakapo
long isoform protein.
Length = 5201
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 109 KSTHRXLGKKVSSNR*SNTMGR*SNTRATKGDDPV 5
K THR LG K S + G+ RA KGD PV
Sbjct: 4300 KETHRQLGAKQSVYDGTMRTGKNLLERAPKGDRPV 4334
>AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH,
isoform H protein.
Length = 8805
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 109 KSTHRXLGKKVSSNR*SNTMGR*SNTRATKGDDPV 5
K THR LG K S + G+ RA KGD PV
Sbjct: 7904 KETHRQLGAKQSVYDGTMRTGKNLLERAPKGDRPV 7938
>AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-PC,
isoform C protein.
Length = 5160
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 109 KSTHRXLGKKVSSNR*SNTMGR*SNTRATKGDDPV 5
K THR LG K S + G+ RA KGD PV
Sbjct: 4259 KETHRQLGAKQSVYDGTMRTGKNLLERAPKGDRPV 4293
>AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-PA,
isoform A protein.
Length = 5501
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 109 KSTHRXLGKKVSSNR*SNTMGR*SNTRATKGDDPV 5
K THR LG K S + G+ RA KGD PV
Sbjct: 4600 KETHRQLGAKQSVYDGTMRTGKNLLERAPKGDRPV 4634
>AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-PE,
isoform E protein.
Length = 5201
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 109 KSTHRXLGKKVSSNR*SNTMGR*SNTRATKGDDPV 5
K THR LG K S + G+ RA KGD PV
Sbjct: 4300 KETHRQLGAKQSVYDGTMRTGKNLLERAPKGDRPV 4334
>AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-PB,
isoform B protein.
Length = 5390
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 109 KSTHRXLGKKVSSNR*SNTMGR*SNTRATKGDDPV 5
K THR LG K S + G+ RA KGD PV
Sbjct: 4489 KETHRQLGAKQSVYDGTMRTGKNLLERAPKGDRPV 4523
>AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-PG,
isoform G protein.
Length = 5385
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -1
Query: 109 KSTHRXLGKKVSSNR*SNTMGR*SNTRATKGDDPV 5
K THR LG K S + G+ RA KGD PV
Sbjct: 4489 KETHRQLGAKQSVYDGTMRTGKNLLERAPKGDRPV 4523
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,045,394
Number of Sequences: 53049
Number of extensions: 340845
Number of successful extensions: 980
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 982468965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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