Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12m12r
(475 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 188 1e-47
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 188 1e-47
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 188 1e-47
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 188 1e-47
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 188 1e-47
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 186 3e-47
AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subun... 31 2.0
AB007155-1|BAA28593.1| 18|Homo sapiens ribosomal protein S19 p... 31 2.0
AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3... 30 4.7
AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3... 30 4.7
AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3... 30 4.7
AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3... 30 4.7
AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3... 30 4.7
AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3... 30 4.7
AF264715-1|AAG14442.1| 132|Homo sapiens complement receptor typ... 30 4.7
AY701504-1|AAV65577.1| 116|Homo sapiens CR1 protein domain SCR2... 29 6.2
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 188 bits (457), Expect = 1e-47
Identities = 89/144 (61%), Positives = 110/144 (76%)
Frame = -1
Query: 445 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 266
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 265 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 86
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
Query: 85 RILTTQGRRDLDRIAAQVRLKAKQ 14
R LT QG+RDLDRIA QV K+
Sbjct: 121 RKLTPQGQRDLDRIAGQVAAANKK 144
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 188 bits (457), Expect = 1e-47
Identities = 89/144 (61%), Positives = 110/144 (76%)
Frame = -1
Query: 445 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 266
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 265 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 86
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
Query: 85 RILTTQGRRDLDRIAAQVRLKAKQ 14
R LT QG+RDLDRIA QV K+
Sbjct: 121 RKLTPQGQRDLDRIAGQVAAANKK 144
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 188 bits (457), Expect = 1e-47
Identities = 89/144 (61%), Positives = 110/144 (76%)
Frame = -1
Query: 445 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 266
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 265 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 86
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
Query: 85 RILTTQGRRDLDRIAAQVRLKAKQ 14
R LT QG+RDLDRIA QV K+
Sbjct: 121 RKLTPQGQRDLDRIAGQVAAANKK 144
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 188 bits (457), Expect = 1e-47
Identities = 89/144 (61%), Positives = 110/144 (76%)
Frame = -1
Query: 445 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 266
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 265 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 86
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
Query: 85 RILTTQGRRDLDRIAAQVRLKAKQ 14
R LT QG+RDLDRIA QV K+
Sbjct: 121 RKLTPQGQRDLDRIAGQVAAANKK 144
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 188 bits (457), Expect = 1e-47
Identities = 89/144 (61%), Positives = 110/144 (76%)
Frame = -1
Query: 445 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 266
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 265 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGG 86
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
Query: 85 RILTTQGRRDLDRIAAQVRLKAKQ 14
R LT QG+RDLDRIA QV K+
Sbjct: 121 RKLTPQGQRDLDRIAGQVAAANKK 144
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 186 bits (454), Expect = 3e-47
Identities = 88/141 (62%), Positives = 109/141 (77%)
Frame = -1
Query: 436 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 257
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 16 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 75
Query: 256 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 77
+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR L
Sbjct: 76 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 135
Query: 76 TTQGRRDLDRIAAQVRLKAKQ 14
T QG+RDLDRIA QV K+
Sbjct: 136 TPQGQRDLDRIAGQVAAANKK 156
>AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subunit
variant protein.
Length = 249
Score = 31.1 bits (67), Expect = 2.0
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = -1
Query: 304 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 134
Y P R +LR P G + T + GGR+ G S CR G R+AL
Sbjct: 179 YTPTISRERAVELLRKCLEEGPGGAGSSTALGGGRRSVGQDRSSSCRRKGRGRRRAL 235
>AB007155-1|BAA28593.1| 18|Homo sapiens ribosomal protein S19
protein.
Length = 18
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1
Query: 88 GRILTTQGRRDLDRIAAQ 35
GR LT QG+RDLDRIA Q
Sbjct: 1 GRKLTPQGQRDLDRIAGQ 18
>AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 179 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 87
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 179 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 87
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 179 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 87
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 179 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 87
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 179 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 87
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 179 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 87
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AF264715-1|AAG14442.1| 132|Homo sapiens complement receptor type 1
protein.
Length = 132
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 179 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 87
FT ++IR C GF +VG +++GRW
Sbjct: 93 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 123
>AY701504-1|AAV65577.1| 116|Homo sapiens CR1 protein domain SCR25
protein.
Length = 116
Score = 29.5 bits (63), Expect = 6.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 179 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 87
FT +++R C GF +VG +++GRW
Sbjct: 84 FTLTEIVRFRCQPGFVMVGSHTVQCQTNGRW 114
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,871,335
Number of Sequences: 237096
Number of extensions: 1447320
Number of successful extensions: 3343
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3343
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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