Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12m09f
(563 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 261 4e-70
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 261 4e-70
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 261 4e-70
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 246 2e-65
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 190 1e-48
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 116 2e-26
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm... 28 7.6
AY010554-1|AAG32586.1| 266|Drosophila melanogaster ACP32 protein. 28 7.6
AY010547-1|AAG32579.1| 266|Drosophila melanogaster ACP32 protein. 28 7.6
AY010544-1|AAG32576.1| 266|Drosophila melanogaster ACP32 protein. 28 7.6
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P... 28 7.6
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 261 bits (640), Expect = 4e-70
Identities = 123/159 (77%), Positives = 136/159 (85%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 561
FCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V
Sbjct: 141 FCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEV 179
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 261 bits (640), Expect = 4e-70
Identities = 123/159 (77%), Positives = 136/159 (85%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 561
FCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V
Sbjct: 141 FCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEV 179
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 261 bits (640), Expect = 4e-70
Identities = 123/159 (77%), Positives = 136/159 (85%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 561
FCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V
Sbjct: 141 FCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEV 179
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 246 bits (601), Expect = 2e-65
Identities = 119/161 (73%), Positives = 132/161 (81%), Gaps = 2/161 (1%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTD 261
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80
Query: 262 AERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 441
E SFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LR
Sbjct: 81 PEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLR 140
Query: 442 VFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCEIITRDV 561
VFCIGFT KD SQRKTCYA +QVR IR +M +IIT +V
Sbjct: 141 VFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEV 181
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 190 bits (463), Expect = 1e-48
Identities = 91/116 (78%), Positives = 98/116 (84%)
Frame = +1
Query: 214 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 393
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 394 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 561
IEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEV 129
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 116 bits (280), Expect = 2e-26
Identities = 54/74 (72%), Positives = 61/74 (82%)
Frame = +1
Query: 340 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 519
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 520 AIRKKMCEIITRDV 561
IR +M +IIT +V
Sbjct: 61 KIRARMTDIITNEV 74
>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
transmembrane protein protein.
Length = 3004
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 215 PFNP-SEAIFVPWVRLTSVVPTCLLLNIDGALTS 117
PF P + +FVPW R+ + P + L+ D TS
Sbjct: 963 PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996
>AY010554-1|AAG32586.1| 266|Drosophila melanogaster ACP32 protein.
Length = 266
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 263 RKGLSANSD*SPNMCKDVMCSATSTAWTSQPISSGGWLKNGRLSSK 400
R+G +A +D C DV + T+T W P++ G ++G L K
Sbjct: 21 REGRTARAD---QRCSDVADADTATHWLPGPVALGQLPEHGALGQK 63
>AY010547-1|AAG32579.1| 266|Drosophila melanogaster ACP32 protein.
Length = 266
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 263 RKGLSANSD*SPNMCKDVMCSATSTAWTSQPISSGGWLKNGRLSSK 400
R+G +A +D C DV + T+T W P++ G ++G L K
Sbjct: 21 REGRTARAD---QRCSDVADADTATHWLPGPVALGQLPEHGALGQK 63
>AY010544-1|AAG32576.1| 266|Drosophila melanogaster ACP32 protein.
Length = 266
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 263 RKGLSANSD*SPNMCKDVMCSATSTAWTSQPISSGGWLKNGRLSSK 400
R+G +A +D C DV + T+T W P++ G ++G L K
Sbjct: 21 REGRTARAD---QRCSDVADADTATHWLPGPVALGQLPEHGALGQK 63
>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
protein.
Length = 3004
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 215 PFNP-SEAIFVPWVRLTSVVPTCLLLNIDGALTS 117
PF P + +FVPW R+ + P + L+ D TS
Sbjct: 963 PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,462,837
Number of Sequences: 53049
Number of extensions: 541608
Number of successful extensions: 1663
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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