Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12m05f
(350 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC; ... 75 3e-13
UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c oxi... 67 9e-11
UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p... 58 5e-08
UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;... 55 3e-07
UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C, mitoch... 47 1e-04
UniRef50_A6EE33 Cluster: Putative uncharacterized protein; n=1; ... 32 3.1
UniRef50_A7RPT2 Cluster: Predicted protein; n=1; Nematostella ve... 32 3.1
UniRef50_Q0LK53 Cluster: Putative uncharacterized protein; n=1; ... 31 4.1
UniRef50_A6W906 Cluster: Putative uncharacterized protein; n=1; ... 31 4.1
UniRef50_A5B8T1 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_P91863 Cluster: Putative uncharacterized protein aex-5;... 31 7.2
>UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC;
n=4; Endopterygota|Rep: Cytochrome c oxidase polypeptide
VIIC - Aedes aegypti (Yellowfever mosquito)
Length = 67
Score = 75.4 bits (177), Expect = 3e-13
Identities = 33/55 (60%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +1
Query: 61 LGRNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 222
+ R +TN VR +HS+GGIPGENLPF + NRYKLT FI++ GSGL AP+ + RH
Sbjct: 8 ISRTGMTNLVRYSHSHGGIPGENLPFSLTNRYKLTALFIVFLGSGLGAPFFVLRH 62
>UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c
oxidase polypeptide VIIc; n=1; Graphocephala
atropunctata|Rep: Putative mitochondrial cytochrome c
oxidase polypeptide VIIc - Graphocephala atropunctata
Length = 65
Score = 66.9 bits (156), Expect = 9e-11
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +1
Query: 67 RNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 222
RN+ T+ R GGIPG NLPF + N++KLT F++Y GSG+S P+L+ RH
Sbjct: 10 RNLSTSLARRSQPGGIPGVNLPFSLDNKFKLTALFVVYFGSGMSVPFLMLRH 61
>UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p -
Drosophila melanogaster (Fruit fly)
Length = 66
Score = 57.6 bits (133), Expect = 5e-08
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +1
Query: 52 SNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 222
S+ + RN + VR +GG+PGENLPF + N+Y++T F + G +P+LI RH
Sbjct: 5 SSVIARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLIVRH 61
>UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 71
Score = 55.2 bits (127), Expect = 3e-07
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +1
Query: 94 NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 222
+H G PG NLP +I NRY LT FIL+ GSGLS P+L+ R+
Sbjct: 25 DHGPEGYPGANLPINIQNRYVLTATFILFFGSGLSLPFLVLRY 67
>UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C,
mitochondrial precursor; n=46; Deuterostomia|Rep:
Cytochrome c oxidase subunit 7C, mitochondrial precursor
- Homo sapiens (Human)
Length = 63
Score = 46.8 bits (106), Expect = 1e-04
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 67 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRH 222
R T+ VR +H G PG+NLPF + N++ L LY GS + P+L+ RH
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRH 58
>UniRef50_A6EE33 Cluster: Putative uncharacterized protein; n=1;
Pedobacter sp. BAL39|Rep: Putative uncharacterized
protein - Pedobacter sp. BAL39
Length = 204
Score = 31.9 bits (69), Expect = 3.1
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 52 SNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGL 195
+NKL ++ NF+ N G EN+ IH Y L L F++Y+ + L
Sbjct: 101 ANKLASHIFNNFISNWEEDGY--ENIVHGIHYMY-LNLRFVMYSAAQL 145
>UniRef50_A7RPT2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 78
Score = 31.9 bits (69), Expect = 3.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 115 PGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITR 219
PG N+PF N+ +L + + Y G+ + P++ R
Sbjct: 35 PGLNMPFQTQNKTRLLIVMVAYLGTCFALPFVAVR 69
>UniRef50_Q0LK53 Cluster: Putative uncharacterized protein; n=1;
Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
uncharacterized protein - Herpetosiphon aurantiacus ATCC
23779
Length = 168
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 123 ESTLRHSQPLQADIVFHPICGLWTISTLSHHPSPA-SEEVIQAAEI 257
++T RH Q L A + P LW S H + A E V+ A EI
Sbjct: 39 QATSRHEQRLTATFIIDPTAQLWIADQRSEHVACARGEHVLAAGEI 84
>UniRef50_A6W906 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 797
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 129 TLRHSQPLQADIVF---HPICGLWTISTLSHHPSPASE 233
TLRH L AD++ P+ T TL HHP PA +
Sbjct: 195 TLRHDDALPADVLCFTREPLLDASTTVTLHHHPRPARD 232
>UniRef50_A5B8T1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 272
Score = 30.7 bits (66), Expect = 7.2
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +1
Query: 7 ENRRNVKMITPLTRISNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFI 174
E R + + + ++S+ G+ VVT FV+ H++ PG+ I+++Y L Y+I
Sbjct: 115 ETRVGCRAMILVRKVSS--GKWVVTKFVKEHTHTLTPGKGRRDLIYDQYPLMCYYI 168
>UniRef50_P91863 Cluster: Putative uncharacterized protein aex-5;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein aex-5 - Caenorhabditis elegans
Length = 537
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 64 GRNVVTN-FVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPY 207
GRN N FV NGG+ G+N +D + + TL F + SG A Y
Sbjct: 264 GRNGKGNIFVWASGNGGVNGDNCAYDGYVSNEYTLSFGVIDASGAPAAY 312
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,137,696
Number of Sequences: 1657284
Number of extensions: 5998895
Number of successful extensions: 13134
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13132
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -