Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12m02r
(361 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011396-1|AAH11396.2| 661|Homo sapiens pseudouridylate synthas... 75 7e-14
BC005209-1|AAH05209.3| 311|Homo sapiens PUS7 protein protein. 75 7e-14
AK000492-1|BAA91203.1| 205|Homo sapiens protein ( Homo sapiens ... 75 7e-14
AC073138-1|AAS07447.1| 195|Homo sapiens unknown protein. 75 7e-14
AB067484-1|BAB67790.1| 645|Homo sapiens KIAA1897 protein protein. 75 7e-14
BC068502-1|AAH68502.1| 701|Homo sapiens pseudouridylate synthas... 32 0.62
BC033621-1|AAH33621.1| 701|Homo sapiens pseudouridylate synthas... 32 0.62
AL136759-1|CAB66693.1| 701|Homo sapiens hypothetical protein pr... 32 0.62
AF389880-1|AAL93215.1| 3036|Homo sapiens rabconnectin protein. 31 1.4
AB020663-1|BAA74879.2| 2237|Homo sapiens KIAA0856 protein protein. 31 1.4
AJ005821-1|CAA06718.2| 3027|Homo sapiens X-like 1 protein protein. 30 1.9
U70671-1|AAB19201.1| 347|Homo sapiens ataxin-2 related protein ... 28 7.6
BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase pr... 28 7.6
BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase pr... 28 7.6
BC040640-1|AAH40640.1| 802|Homo sapiens Rho guanine nucleotide ... 28 7.6
BC012982-1|AAH12982.1| 706|Homo sapiens ARHGEF19 protein protein. 28 7.6
AL109627-9|CAI22567.1| 502|Homo sapiens Rho guanine nucleotide ... 28 7.6
AL109627-8|CAI22566.1| 802|Homo sapiens Rho guanine nucleotide ... 28 7.6
AK091281-1|BAC03627.1| 502|Homo sapiens protein ( Homo sapiens ... 28 7.6
>BC011396-1|AAH11396.2| 661|Homo sapiens pseudouridylate synthase 7
homolog (S. cerevisiae) protein.
Length = 661
Score = 74.9 bits (176), Expect = 7e-14
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = -2
Query: 360 LEKDGLDI-KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXA 184
L D LDI ++++++ YS GA R+++ RP SW + Y
Sbjct: 551 LTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKT 610
Query: 183 PPAPQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALLS 46
PP +GKY AL + +LPPS YATM +RE++K DTS + Q L+
Sbjct: 611 PPVFASEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 656
>BC005209-1|AAH05209.3| 311|Homo sapiens PUS7 protein protein.
Length = 311
Score = 74.9 bits (176), Expect = 7e-14
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = -2
Query: 360 LEKDGLDI-KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXA 184
L D LDI ++++++ YS GA R+++ RP SW + Y
Sbjct: 201 LTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKT 260
Query: 183 PPAPQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALLS 46
PP +GKY AL + +LPPS YATM +RE++K DTS + Q L+
Sbjct: 261 PPVFASEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 306
>AK000492-1|BAA91203.1| 205|Homo sapiens protein ( Homo sapiens
cDNA FLJ20485 fis, clone KAT07835. ).
Length = 205
Score = 74.9 bits (176), Expect = 7e-14
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = -2
Query: 360 LEKDGLDI-KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXA 184
L D LDI ++++++ YS GA R+++ RP SW + Y
Sbjct: 95 LTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKT 154
Query: 183 PPAPQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALLS 46
PP +GKY AL + +LPPS YATM +RE++K DTS + Q L+
Sbjct: 155 PPVFASEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 200
>AC073138-1|AAS07447.1| 195|Homo sapiens unknown protein.
Length = 195
Score = 74.9 bits (176), Expect = 7e-14
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = -2
Query: 360 LEKDGLDI-KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXA 184
L D LDI ++++++ YS GA R+++ RP SW + Y
Sbjct: 85 LTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKT 144
Query: 183 PPAPQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALLS 46
PP +GKY AL + +LPPS YATM +RE++K DTS + Q L+
Sbjct: 145 PPVFASEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 190
>AB067484-1|BAB67790.1| 645|Homo sapiens KIAA1897 protein protein.
Length = 645
Score = 74.9 bits (176), Expect = 7e-14
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = -2
Query: 360 LEKDGLDI-KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXA 184
L D LDI ++++++ YS GA R+++ RP SW + Y
Sbjct: 535 LTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKT 594
Query: 183 PPAPQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALLS 46
PP +GKY AL + +LPPS YATM +RE++K DTS + Q L+
Sbjct: 595 PPVFASEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 640
>BC068502-1|AAH68502.1| 701|Homo sapiens pseudouridylate synthase 7
homolog (S. cerevisiae)-like protein.
Length = 701
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -2
Query: 150 ALLLTMTLPPSCYATMMLRELMKTD 76
+LL++ L SCYAT+ L+E+MK D
Sbjct: 676 SLLISFDLDASCYATVCLKEIMKHD 700
>BC033621-1|AAH33621.1| 701|Homo sapiens pseudouridylate synthase 7
homolog (S. cerevisiae)-like protein.
Length = 701
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -2
Query: 150 ALLLTMTLPPSCYATMMLRELMKTD 76
+LL++ L SCYAT+ L+E+MK D
Sbjct: 676 SLLISFDLDASCYATVCLKEIMKHD 700
>AL136759-1|CAB66693.1| 701|Homo sapiens hypothetical protein
protein.
Length = 701
Score = 31.9 bits (69), Expect = 0.62
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -2
Query: 150 ALLLTMTLPPSCYATMMLRELMKTD 76
+LL++ L SCYAT+ L+E+MK D
Sbjct: 676 SLLISFDLDASCYATVCLKEIMKHD 700
>AF389880-1|AAL93215.1| 3036|Homo sapiens rabconnectin protein.
Length = 3036
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -2
Query: 183 PPAPQEDGKYEAL-LLTMTLPPSCYATMMLRELMKTDTSSRAQALLSHPLK 34
P Q+ G +EA +L+ TLP Y L ELM RA+A+LSH +K
Sbjct: 1325 PTVIQDGGLFEAAHVLSPTLPQ--YHPTQLLELMDLGKVRRAKAILSHLVK 1373
>AB020663-1|BAA74879.2| 2237|Homo sapiens KIAA0856 protein protein.
Length = 2237
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -2
Query: 183 PPAPQEDGKYEAL-LLTMTLPPSCYATMMLRELMKTDTSSRAQALLSHPLK 34
P Q+ G +EA +L+ TLP Y L ELM RA+A+LSH +K
Sbjct: 525 PTVIQDGGLFEAAHVLSPTLPQ--YHPTQLLELMDLGKVRRAKAILSHLVK 573
>AJ005821-1|CAA06718.2| 3027|Homo sapiens X-like 1 protein protein.
Length = 3027
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 183 PPAPQED-GKYEAL-LLTMTLPPSCYATMMLRELMKTDTSSRAQALLSHPLK 34
P ED G +EA +L+ TLP Y + L ELM RA+A+LSH +K
Sbjct: 1302 PSVDMEDSGLFEAAHVLSPTLPQ--YHPLQLLELMDLGKVRRAKAILSHLVK 1351
>U70671-1|AAB19201.1| 347|Homo sapiens ataxin-2 related protein
protein.
Length = 347
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Frame = -1
Query: 121 QLLRHNDVARTDEDGHLV---EGSG----PTLSSAEEDGVPRPSRGR 2
++ ND RT+E+ H +GSG P+L+S E +P P RG+
Sbjct: 259 RIAMENDDGRTEEEKHSAVQRQGSGRGESPSLASREGKYIPLPHRGQ 305
>BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 97 ARTDEDGHLVEGSGPTLSSAEEDGVPRP--SRGR 2
AR + ++ G GP L A + G+PRP S GR
Sbjct: 29 ARQRAEAAVLSGPGPPLGRAAQHGIPRPLSSAGR 62
>BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -1
Query: 97 ARTDEDGHLVEGSGPTLSSAEEDGVPRP--SRGR 2
AR + ++ G GP L A + G+PRP S GR
Sbjct: 29 ARQRAEAAVLSGPGPPLGRAAQHGIPRPLSSAGR 62
>BC040640-1|AAH40640.1| 802|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 19 protein.
Length = 802
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 3 RPREGRGTPSSSADERVGPEPSTRCPSSSVRA 98
R EG G + A+E GP + PSSS RA
Sbjct: 312 REEEGPGDEAEGAEEGPGPPRANLSPSSSFRA 343
>BC012982-1|AAH12982.1| 706|Homo sapiens ARHGEF19 protein protein.
Length = 706
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 3 RPREGRGTPSSSADERVGPEPSTRCPSSSVRA 98
R EG G + A+E GP + PSSS RA
Sbjct: 216 REEEGPGDEAEGAEEGPGPPRANLSPSSSFRA 247
>AL109627-9|CAI22567.1| 502|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 19 protein.
Length = 502
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 3 RPREGRGTPSSSADERVGPEPSTRCPSSSVRA 98
R EG G + A+E GP + PSSS RA
Sbjct: 312 REEEGPGDEAEGAEEGPGPPRANLSPSSSFRA 343
>AL109627-8|CAI22566.1| 802|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 19 protein.
Length = 802
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 3 RPREGRGTPSSSADERVGPEPSTRCPSSSVRA 98
R EG G + A+E GP + PSSS RA
Sbjct: 312 REEEGPGDEAEGAEEGPGPPRANLSPSSSFRA 343
>AK091281-1|BAC03627.1| 502|Homo sapiens protein ( Homo sapiens
cDNA FLJ33962 fis, clone CTONG2018900, moderately
similar to PROBABLE GUANINE NUCLEOTIDE REGULATORY
PROTEIN TIM. ).
Length = 502
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 3 RPREGRGTPSSSADERVGPEPSTRCPSSSVRA 98
R EG G + A+E GP + PSSS RA
Sbjct: 312 REEEGPGDEAEGAEEGPGPPRANLSPSSSFRA 343
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,476,890
Number of Sequences: 237096
Number of extensions: 705425
Number of successful extensions: 2706
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2692
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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