Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12m02r
(361 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069192-1|AAL39337.1| 734|Drosophila melanogaster GH24787p pro... 59 1e-09
AE014296-1465|AAF50409.1| 734|Drosophila melanogaster CG6745-PA... 59 1e-09
AY069118-1|AAL39263.1| 370|Drosophila melanogaster GH13089p pro... 29 1.8
AE014134-3344|AAF53965.1| 370|Drosophila melanogaster CG1071-PA... 29 1.8
AB016824-1|BAA33742.1| 370|Drosophila melanogaster E2F-like tra... 29 1.8
BT025858-1|ABF85758.1| 592|Drosophila melanogaster IP15543p pro... 27 9.5
BT003619-1|AAO39622.1| 1167|Drosophila melanogaster GH12052p pro... 27 9.5
AF461100-1|AAL66368.1| 1179|Drosophila melanogaster dystroglycan... 27 9.5
AF217845-1|AAF34753.1| 1178|Drosophila melanogaster DESERT protein. 27 9.5
AE014296-1518|AAN11996.1| 1235|Drosophila melanogaster CG32025-P... 27 9.5
AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-P... 27 9.5
AE014134-418|AAF51248.1| 121|Drosophila melanogaster CG15393-PA... 27 9.5
AE013599-2171|AAO41377.2| 1179|Drosophila melanogaster CG18250-P... 27 9.5
AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein. 27 9.5
>AY069192-1|AAL39337.1| 734|Drosophila melanogaster GH24787p
protein.
Length = 734
Score = 59.3 bits (137), Expect = 1e-09
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = -2
Query: 336 KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXA-PPAPQE-D 163
+LK++ KTY+ GA R+++ W+ Y P P E +
Sbjct: 589 QLKHKEKTYALAGAYRKMIISSSDLKWSFRMYNTPEDTLIASDWELLKNIPVAPEPAEAE 648
Query: 162 GKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALL 49
Y ALLL +LP + YATM LREL+K DTSS +Q L
Sbjct: 649 ANYMALLLEFSLPTAAYATMFLRELLKQDTSSASQTQL 686
>AE014296-1465|AAF50409.1| 734|Drosophila melanogaster CG6745-PA
protein.
Length = 734
Score = 59.3 bits (137), Expect = 1e-09
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = -2
Query: 336 KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXA-PPAPQE-D 163
+LK++ KTY+ GA R+++ W+ Y P P E +
Sbjct: 589 QLKHKEKTYALAGAYRKMIISSSDLKWSFRMYNTPEDTLIASDWELLKNIPVAPEPAEAE 648
Query: 162 GKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALL 49
Y ALLL +LP + YATM LREL+K DTSS +Q L
Sbjct: 649 ANYMALLLEFSLPTAAYATMFLRELLKQDTSSASQTQL 686
>AY069118-1|AAL39263.1| 370|Drosophila melanogaster GH13089p
protein.
Length = 370
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 111 ATMMLRELMKTDTSSRAQALLSHPLKRTASPDPP 10
++ M+ ++ +TS R+Q+ S P+ SPDPP
Sbjct: 21 SSAMMMKVDSAETSVRSQSYESTPVSMDTSPDPP 54
>AE014134-3344|AAF53965.1| 370|Drosophila melanogaster CG1071-PA
protein.
Length = 370
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 111 ATMMLRELMKTDTSSRAQALLSHPLKRTASPDPP 10
++ M+ ++ +TS R+Q+ S P+ SPDPP
Sbjct: 21 SSAMMMKVDSAETSVRSQSYESTPVSMDTSPDPP 54
>AB016824-1|BAA33742.1| 370|Drosophila melanogaster E2F-like
transcription factor(E2F2) protein.
Length = 370
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 111 ATMMLRELMKTDTSSRAQALLSHPLKRTASPDPP 10
++ M+ ++ +TS R+Q+ S P+ SPDPP
Sbjct: 21 SSAMMMKVDSAETSVRSQSYESTPVSMDTSPDPP 54
>BT025858-1|ABF85758.1| 592|Drosophila melanogaster IP15543p
protein.
Length = 592
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 9 REGRGTPSSSADERVGPEPSTRCPSSSVRATS 104
R G T SSS+ P PS+ P+ + + T+
Sbjct: 432 RNGLATTSSSSSSSASPPPSSSVPTQATQPTT 463
>BT003619-1|AAO39622.1| 1167|Drosophila melanogaster GH12052p protein.
Length = 1167
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Frame = +3
Query: 3 RPREGRGTP---SSSADERVGP-------EPSTRCPSSSVRATSLWRSN 119
RP +GRG P SSS+ VGP + S P SS+ ++ ++ N
Sbjct: 1053 RPTQGRGVPASRSSSSGSSVGPSVILVRSKMSNTAPKSSIHGSTSFKEN 1101
>AF461100-1|AAL66368.1| 1179|Drosophila melanogaster dystroglycan
type I protein.
Length = 1179
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 9 REGRGTPSSSADERVGPEPSTRCPSSSVRATS 104
R G T SSS+ P PS+ P+ + + T+
Sbjct: 432 RNGLATTSSSSSSSASPPPSSSVPTQATQPTT 463
>AF217845-1|AAF34753.1| 1178|Drosophila melanogaster DESERT protein.
Length = 1178
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +3
Query: 3 RPREGRGTPSSSADERV---GPEPSTRCPSSSVRAT 101
R E R TPSS A + P STRCP + T
Sbjct: 695 RTNEPRTTPSSEAKQSPQTNSPSSSTRCPRETTTET 730
>AE014296-1518|AAN11996.1| 1235|Drosophila melanogaster CG32025-PA
protein.
Length = 1235
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +3
Query: 3 RPREGRGTPSSSADERV---GPEPSTRCPSSSVRAT 101
R E R TPSS A + P STRCP + T
Sbjct: 695 RTNEPRTTPSSEAKQSPQTNSPSSSTRCPRETTTET 730
>AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-PA
protein.
Length = 1644
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Frame = +3
Query: 3 RPREGRGTP---SSSADERVGP-------EPSTRCPSSSVRATSLWRSN 119
RP +GRG P SSS+ VGP + S P SS+ ++ ++ N
Sbjct: 1530 RPTQGRGVPASRSSSSGSSVGPSVILVRSKMSNTAPKSSIHGSTSFKEN 1578
>AE014134-418|AAF51248.1| 121|Drosophila melanogaster CG15393-PA
protein.
Length = 121
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 12 EGRGTPSSSADERVGPEPSTRCPSSSVRATSLWRSNW 122
+G+ T + S E + +PS RCP S LW N+
Sbjct: 42 DGQLTDNQSTAEAMMAQPS-RCPLPSAAVPQLWGDNY 77
>AE013599-2171|AAO41377.2| 1179|Drosophila melanogaster CG18250-PC,
isoform C protein.
Length = 1179
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 9 REGRGTPSSSADERVGPEPSTRCPSSSVRATS 104
R G T SSS+ P PS+ P+ + + T+
Sbjct: 432 RNGLATTSSSSSSSASPPPSSSVPTQATQPTT 463
>AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein.
Length = 1644
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Frame = +3
Query: 3 RPREGRGTP---SSSADERVGP-------EPSTRCPSSSVRATSLWRSN 119
RP +GRG P SSS+ VGP + S P SS+ ++ ++ N
Sbjct: 1530 RPTQGRGVPASRSSSSGSSVGPSVILVRSKMSNTAPKSSIHGSTSFKEN 1578
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,647,179
Number of Sequences: 53049
Number of extensions: 216917
Number of successful extensions: 968
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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