Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12m02f
(408 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB798B Cluster: PREDICTED: similar to Pseudourid... 81 6e-15
UniRef50_A7T011 Cluster: Predicted protein; n=1; Nematostella ve... 76 2e-13
UniRef50_UPI0000D56CA0 Cluster: PREDICTED: similar to Probable p... 75 4e-13
UniRef50_UPI00015B5E9A Cluster: PREDICTED: similar to tRNA pseud... 75 6e-13
UniRef50_Q96PZ0 Cluster: Pseudouridylate synthase 7 homolog; n=3... 75 6e-13
UniRef50_Q0IG93 Cluster: tRNA pseudouridine synthase D; n=4; Coe... 63 2e-09
UniRef50_Q9VSK9 Cluster: CG6745-PA; n=2; Sophophora|Rep: CG6745-... 60 2e-08
UniRef50_Q5KD79 Cluster: Pseudouridine synthase, putative; n=1; ... 56 4e-07
UniRef50_Q011Z9 Cluster: [S] KOG2339 Uncharacterized conserved p... 52 4e-06
UniRef50_Q6CAL7 Cluster: Similar to sp|Q08647 Saccharomyces cere... 48 7e-05
UniRef50_UPI00006CF213 Cluster: tRNA pseudouridine synthase D; n... 48 1e-04
UniRef50_A4S2C4 Cluster: Predicted protein; n=1; Ostreococcus lu... 46 2e-04
UniRef50_A3LW69 Cluster: Predicted protein; n=3; Saccharomycetac... 45 5e-04
UniRef50_O74343 Cluster: Putative pseudouridine synthase C1A4.09... 45 7e-04
UniRef50_A7Q5Y2 Cluster: Chromosome chr14 scaffold_54, whole gen... 43 0.003
UniRef50_A7TH50 Cluster: Putative uncharacterized protein; n=1; ... 42 0.004
UniRef50_Q55AW7 Cluster: Putative uncharacterized protein; n=2; ... 41 0.011
UniRef50_Q4P787 Cluster: Putative uncharacterized protein; n=1; ... 40 0.015
UniRef50_Q5ZBZ5 Cluster: Potential U2 snRNA pseudouridine syntha... 40 0.019
UniRef50_Q0JIW7 Cluster: Os01g0773000 protein; n=1; Oryza sativa... 39 0.045
UniRef50_Q08647 Cluster: Putative pseudouridine synthase YOR243C... 39 0.045
UniRef50_A2Y6D6 Cluster: Putative uncharacterized protein; n=2; ... 38 0.10
UniRef50_A2EJH2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.24
UniRef50_Q59XZ9 Cluster: Potential U2 snRNA pseudouridine syntha... 35 0.55
UniRef50_UPI0000498330 Cluster: conserved hypothetical protein; ... 35 0.73
UniRef50_Q1DED6 Cluster: Putative uncharacterized protein; n=1; ... 35 0.73
UniRef50_A0BVU8 Cluster: Chromosome undetermined scaffold_130, w... 35 0.73
UniRef50_Q7QSM8 Cluster: GLP_618_4306_2270; n=1; Giardia lamblia... 34 0.96
UniRef50_Q4Q4T4 Cluster: Putative uncharacterized protein; n=3; ... 34 0.96
UniRef50_Q2FLI6 Cluster: Pseudouridylate synthase; n=1; Methanos... 34 1.3
UniRef50_Q4RHN6 Cluster: Chromosome 19 SCAF15045, whole genome s... 33 2.2
UniRef50_O27572 Cluster: Probable tRNA pseudouridine synthase D;... 33 2.2
UniRef50_A6C2P7 Cluster: tRNA pseudouridine synthase D; n=1; Pla... 33 2.9
UniRef50_O67616 Cluster: tRNA pseudouridine synthase D; n=1; Aqu... 33 2.9
UniRef50_UPI00015B462C Cluster: PREDICTED: similar to transcript... 32 3.9
UniRef50_UPI0000F1DCAD Cluster: PREDICTED: hypothetical protein;... 32 5.1
UniRef50_UPI0000E4808E Cluster: PREDICTED: similar to MGC83224 p... 32 5.1
UniRef50_Q6Z243 Cluster: Putative uncharacterized protein OSJNBb... 32 5.1
UniRef50_Q6NUP2 Cluster: Pseudouridylate synthase 7 homolog (S. ... 32 5.1
UniRef50_Q9RSX8 Cluster: tRNA pseudouridine synthase D; n=2; Dei... 32 5.1
UniRef50_A7HGV2 Cluster: tRNA pseudouridine synthase D TruD; n=4... 31 6.8
UniRef50_A4INK9 Cluster: Spore coat protein B CotB; n=1; Geobaci... 31 6.8
UniRef50_Q4GZ59 Cluster: Putative uncharacterized protein; n=2; ... 31 6.8
UniRef50_A5HWL3 Cluster: Elongation factor 1-alpha; n=6; Gloeopo... 31 6.8
UniRef50_UPI00015A5025 Cluster: Hypothetical protein; n=1; Danio... 31 8.9
UniRef50_UPI0000F32540 Cluster: PREDICTED: Bos taurus similar to... 31 8.9
UniRef50_Q2T4N1 Cluster: Polyketide synthase; n=2; Bacteria|Rep:... 31 8.9
UniRef50_Q0V0L0 Cluster: Putative uncharacterized protein; n=1; ... 31 8.9
UniRef50_Q0CDZ7 Cluster: Predicted protein; n=1; Aspergillus ter... 31 8.9
UniRef50_A2QJX8 Cluster: Contig An04c0280, complete genome; n=7;... 31 8.9
>UniRef50_UPI0000DB798B Cluster: PREDICTED: similar to
Pseudouridylate synthase 7 homolog; n=1; Apis
mellifera|Rep: PREDICTED: similar to Pseudouridylate
synthase 7 homolog - Apis mellifera
Length = 601
Score = 81.4 bits (192), Expect = 6e-15
Identities = 40/102 (39%), Positives = 56/102 (54%)
Frame = +2
Query: 2 LEKDGLDIKLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXXP 181
L KDGL L+ R K YS GA R++++ P SW + Y P
Sbjct: 447 LAKDGLTTDLRQRNKKYSLGGAYRKILEIPSNLSWKIMHYTEKHSDLIMCDIDEMRKSSP 506
Query: 182 PAPQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQA 307
P GK++A+++ M+L PS YATM LRE++K+DTS +AQA
Sbjct: 507 PKDDPKGKFKAIIIQMSLKPSTYATMALREILKSDTSPQAQA 548
>UniRef50_A7T011 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 545
Score = 76.2 bits (179), Expect = 2e-13
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +2
Query: 11 DGLDI-KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXXPPA 187
DG+DI K+++RVK YS GA R ++ +P SW Y
Sbjct: 443 DGVDIDKMRHRVKDYSLSGAYRPIIIKPQHTSWKFIHYNDVTAPLALTDLDRLEGRTDIP 502
Query: 188 PQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALLS 316
+ DG+Y AL + +TLP SCYATM LRE+++ DTS QA ++
Sbjct: 503 AETDGQYLALQIELTLPSSCYATMALREVLRKDTSPATQAAMN 545
>UniRef50_UPI0000D56CA0 Cluster: PREDICTED: similar to Probable
pseudouridine synthase KIAA1897; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Probable
pseudouridine synthase KIAA1897 - Tribolium castaneum
Length = 668
Score = 75.4 bits (177), Expect = 4e-13
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = +2
Query: 2 LEKDGLDIKL-KNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXX 178
LEK GL +++ + +V+TY+ G R+L+ + SW + Y
Sbjct: 499 LEKYGLTLEMTRQKVRTYTLSGTYRKLMGQVQNLSWKIMYYNDPNDNLIRSDLEELKGEK 558
Query: 179 PPAPQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALLSHPLKRTASPD 346
PA E GKY+ALLL L S YATM+LRE++K+DTSS + A L++ TA P+
Sbjct: 559 EPASVEGGKYKALLLDFCLDSSSYATMVLREILKSDTSSSSHAKLNNYHVATAKPE 614
>UniRef50_UPI00015B5E9A Cluster: PREDICTED: similar to tRNA
pseudouridine synthase D; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to tRNA pseudouridine synthase D -
Nasonia vitripennis
Length = 806
Score = 74.9 bits (176), Expect = 6e-13
Identities = 38/102 (37%), Positives = 54/102 (52%)
Frame = +2
Query: 2 LEKDGLDIKLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXXP 181
LEKDGL LK + K Y+ G+ R+++Q P SW + RY
Sbjct: 572 LEKDGLTADLKQKNKKYTLSGSYRKILQVPEDLSWNIIRYVNKTDDLIASDIDEMKGIEA 631
Query: 182 PAPQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQA 307
P +G ++AL++ M+L S YATM LRE++K DTSS+ A
Sbjct: 632 PKDNPEGTFKALVIQMSLKSSSYATMALREILKCDTSSQTHA 673
>UniRef50_Q96PZ0 Cluster: Pseudouridylate synthase 7 homolog; n=30;
Euteleostomi|Rep: Pseudouridylate synthase 7 homolog -
Homo sapiens (Human)
Length = 661
Score = 74.9 bits (176), Expect = 6e-13
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = +2
Query: 2 LEKDGLDI-KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXX 178
L D LDI ++++++ YS GA R+++ RP SW + Y
Sbjct: 551 LTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKT 610
Query: 179 PPAPQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALLS 316
PP +GKY AL + +LPPS YATM +RE++K DTS + Q L+
Sbjct: 611 PPVFASEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLN 656
>UniRef50_Q0IG93 Cluster: tRNA pseudouridine synthase D; n=4;
Coelomata|Rep: tRNA pseudouridine synthase D - Aedes
aegypti (Yellowfever mosquito)
Length = 723
Score = 63.3 bits (147), Expect = 2e-09
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 LEKDGLDI-KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXX 178
L +DGL KLK + K S GA R+++ +P W L Y
Sbjct: 546 LAEDGLSSEKLKGKTKKESLGGAYRKMIIKPENLKWELTTYTDPMETLIQSDLEKLKGEK 605
Query: 179 PPAPQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALL 313
++DG +AL+L LP S YATM LRE++K DTS+ Q L
Sbjct: 606 KREAKKDGSNKALILDFQLPSSAYATMALREILKVDTSALHQRTL 650
>UniRef50_Q9VSK9 Cluster: CG6745-PA; n=2; Sophophora|Rep: CG6745-PA
- Drosophila melanogaster (Fruit fly)
Length = 734
Score = 60.1 bits (139), Expect = 2e-08
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +2
Query: 26 KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXX-XPPAPQE-D 199
+LK++ KTY+ GA R+++ W+ Y P P E +
Sbjct: 589 QLKHKEKTYALAGAYRKMIISSSDLKWSFRMYNTPEDTLIASDWELLKNIPVAPEPAEAE 648
Query: 200 GKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALL 313
Y ALLL +LP + YATM LREL+K DTSS +Q L
Sbjct: 649 ANYMALLLEFSLPTAAYATMFLRELLKQDTSSASQTQL 686
>UniRef50_Q5KD79 Cluster: Pseudouridine synthase, putative; n=1;
Filobasidiella neoformans|Rep: Pseudouridine synthase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 863
Score = 55.6 bits (128), Expect = 4e-07
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +2
Query: 2 LEKDGLDI-KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXX 178
L+ DGLD +++ + YS G+ R ++ RP + +W +Y
Sbjct: 724 LKADGLDKDRMRREQREYSLPGSYRLILLRPLSLTWTHLQYTDPDLPLVQSDEDEILSLN 783
Query: 179 PPAPQE-DGKYEALLLTMTLPPSCYATMMLRELMKTDTSS 295
PPA + +GK+ A+ + M L S YATM+LRE+ + +TSS
Sbjct: 784 PPAANDPEGKFRAVKVDMQLGASTYATMVLREITREETSS 823
>UniRef50_Q011Z9 Cluster: [S] KOG2339 Uncharacterized conserved
protein; n=1; Ostreococcus tauri|Rep: [S] KOG2339
Uncharacterized conserved protein - Ostreococcus tauri
Length = 640
Score = 52.0 bits (119), Expect = 4e-06
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +2
Query: 194 EDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALLSHPLKRTASPD 346
EDG A+ + TLPPS YATM+LRELMK++TS A + RT+ PD
Sbjct: 589 EDGPLRAVTVKFTLPPSSYATMVLRELMKSNTSVLAHKQKTLDSARTSEPD 639
>UniRef50_Q6CAL7 Cluster: Similar to sp|Q08647 Saccharomyces
cerevisiae YOR243c; n=1; Yarrowia lipolytica|Rep:
Similar to sp|Q08647 Saccharomyces cerevisiae YOR243c -
Yarrowia lipolytica (Candida lipolytica)
Length = 649
Score = 48.0 bits (109), Expect = 7e-05
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 LEKDGLDI-KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXX---XXXXXXXXXXXXXX 169
+ KD LD K+ ++ YS G R + +P W +Y
Sbjct: 539 MAKDNLDPHKMARTIRDYSLAGGYRHVFAKPSGVEWFFEKYSNPVEQFVNTDLDMLEKGV 598
Query: 170 XXXPPAPQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQA 307
++DG L+L + L + YATM LRE+MK DTS R+ +
Sbjct: 599 DRYTHCDEQDGDKLGLVLKLQLGSAQYATMALREVMKVDTSRRSDS 644
>UniRef50_UPI00006CF213 Cluster: tRNA pseudouridine synthase D; n=2;
Tetrahymena thermophila SB210|Rep: tRNA pseudouridine
synthase D - Tetrahymena thermophila SB210
Length = 619
Score = 47.6 bits (108), Expect = 1e-04
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 LEKDGLDIKLKNRV-KTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXX 178
LEKDGLD +L ++ K + G R L+ + +++++Y
Sbjct: 511 LEKDGLDQQLFEKIQKEFFVEGGYRFLICQAEDVQYSINKYNEKNQDILTPYYNVQQDHS 570
Query: 179 PPAPQEDGKYEALLLTMTLPPSCYATMMLRELMK 280
+E+GKY AL L TL YATM++REL K
Sbjct: 571 ----EENGKYSALCLKFTLAKGSYATMLIRELTK 600
>UniRef50_A4S2C4 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 652
Score = 46.4 bits (105), Expect = 2e-04
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2
Query: 194 EDGKYEALLLTMTLPPSCYATMMLRELMKTDTS 292
EDG A+ + TLPPS YATM+LRELMK +TS
Sbjct: 602 EDGPLRAVTVKFTLPPSSYATMVLRELMKANTS 634
>UniRef50_A3LW69 Cluster: Predicted protein; n=3;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 680
Score = 45.2 bits (102), Expect = 5e-04
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Frame = +2
Query: 2 LEKDGLD-IKLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXX 178
+ +DGLD K+ R+K +S G+ R L+ RP ++ + +Y
Sbjct: 562 MAQDGLDPYKMGRRIKEFSLTGSYRNLMTRPENLTYKIVKYSDNSVPLVRTDLEILRLKK 621
Query: 179 PPAPQE--------DGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALL 313
E + A++LTM L S YATM +RE MK DTS ++ ++
Sbjct: 622 EGKDVERIIKVEGDEATKTAVVLTMQLGVSSYATMAMREFMKADTSRWSENMM 674
>UniRef50_O74343 Cluster: Putative pseudouridine synthase C1A4.09;
n=1; Schizosaccharomyces pombe|Rep: Putative
pseudouridine synthase C1A4.09 - Schizosaccharomyces
pombe (Fission yeast)
Length = 680
Score = 44.8 bits (101), Expect = 7e-04
Identities = 31/101 (30%), Positives = 44/101 (43%)
Frame = +2
Query: 11 DGLDIKLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXXPPAP 190
D L++ K+R S G R+L+ RP + +Y
Sbjct: 573 DPLNMSRKDR--ELSLPGDYRKLLVRPENMEFNFIKYDNMEQQLILTDKDRLENRSISVS 630
Query: 191 QEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALL 313
E GK+ A+ L LP S YATM LRE ++T T+S Q +L
Sbjct: 631 SEVGKHTAVTLKFVLPSSAYATMALREALRTATASGDQRML 671
>UniRef50_A7Q5Y2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 697
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +2
Query: 212 ALLLTMTLPPSCYATMMLRELMKTDTS 292
AL L+ TLP SCYATM +REL+KT TS
Sbjct: 656 ALKLSFTLPASCYATMAIRELLKTSTS 682
>UniRef50_A7TH50 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 683
Score = 42.3 bits (95), Expect = 0.004
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Frame = +2
Query: 2 LEKDGLDI-KLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXX 178
+ KDG++ ++K RV+ +S G+ R +VQ P + + +Y
Sbjct: 561 MAKDGMNPNEMKRRVRDFSLAGSYRNVVQVPEGLEYKIVKYSDATQQLVNTDLEMLNSKR 620
Query: 179 PP--------------APQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSR 298
P++ G A+++ L S YATM LRELMK +TS R
Sbjct: 621 AKDNGQKYMKDKLERYVPEKSGDKTAVIIKFKLGVSAYATMALRELMKLETSRR 674
>UniRef50_Q55AW7 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 729
Score = 40.7 bits (91), Expect = 0.011
Identities = 23/91 (25%), Positives = 39/91 (42%)
Frame = +2
Query: 32 KNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXXPPAPQEDGKYE 211
KNR RG R+L++ ++ + Y P +GK++
Sbjct: 584 KNRA--IDLRGGYRKLLETAKDTTYKIFNYDDFTIPLALSDIEILKGSQEPVDVPNGKHK 641
Query: 212 ALLLTMTLPPSCYATMMLRELMKTDTSSRAQ 304
A+ + LP S YATM RE++K+ + +Q
Sbjct: 642 AVRVCFNLPSSTYATMAYREILKSSSDMTSQ 672
>UniRef50_Q4P787 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 811
Score = 40.3 bits (90), Expect = 0.015
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2
Query: 203 KYEALLLTMTLPPSCYATMMLRELMKTDTSS 295
K+ AL L LP S YATM++RE +K+DTSS
Sbjct: 759 KFTALTLRFQLPSSSYATMLMREALKSDTSS 789
>UniRef50_Q5ZBZ5 Cluster: Potential U2 snRNA pseudouridine
synthase-like; n=2; Oryza sativa|Rep: Potential U2 snRNA
pseudouridine synthase-like - Oryza sativa subsp.
japonica (Rice)
Length = 629
Score = 39.9 bits (89), Expect = 0.019
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 212 ALLLTMTLPPSCYATMMLRELMKTDTSSRAQALLS 316
A+ L TLP S YATM +RELMKT TS Q L+
Sbjct: 594 AIKLAFTLPASSYATMAIRELMKTSTSVAHQKTLN 628
>UniRef50_Q0JIW7 Cluster: Os01g0773000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os01g0773000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 606
Score = 38.7 bits (86), Expect = 0.045
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2
Query: 212 ALLLTMTLPPSCYATMMLRELMKTDTS 292
A+ L TLP S YATM +RELMKT TS
Sbjct: 497 AIKLAFTLPASSYATMAIRELMKTSTS 523
>UniRef50_Q08647 Cluster: Putative pseudouridine synthase YOR243C;
n=5; Saccharomycetales|Rep: Putative pseudouridine
synthase YOR243C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 676
Score = 38.7 bits (86), Expect = 0.045
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 188 PQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSR 298
P + G+ A++L L S YATM LRELMK +TS R
Sbjct: 630 PDKGGEKTAVVLKFQLGTSAYATMALRELMKLETSRR 666
>UniRef50_A2Y6D6 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 653
Score = 37.5 bits (83), Expect = 0.10
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +2
Query: 212 ALLLTMTLPPSCYATMMLRELMKTDTS 292
A+ L TLP S YATM +REL+KT TS
Sbjct: 624 AIKLAFTLPASSYATMAIRELLKTSTS 650
>UniRef50_A2EJH2 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 530
Score = 36.3 bits (80), Expect = 0.24
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +2
Query: 2 LEKDGLDIKLKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXXP 181
L+KDG++ + + K G R+L +P S+ + +
Sbjct: 410 LKKDGIEQSMFSAQKELGLVGDYRKLFAQPTDISFDIIEHDDNDAELIDSDIDKLEGRTN 469
Query: 182 PAPQ-EDGKYEALLLTMTLPPSCYATMMLRELMKTDT 289
GK+++ ++ +L PS YATM +RELMK T
Sbjct: 470 KGNHVPGGKFKSAVVEFSLGPSQYATMCMRELMKRTT 506
>UniRef50_Q59XZ9 Cluster: Potential U2 snRNA pseudouridine synthase;
n=4; Saccharomycetales|Rep: Potential U2 snRNA
pseudouridine synthase - Candida albicans (Yeast)
Length = 759
Score = 35.1 bits (77), Expect = 0.55
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 191 QEDGKYEALLLTMTLPPSCYATMMLRELMKTDTS 292
+E G A++L M L S YATM LRE M+ DTS
Sbjct: 718 KEGGNKLAVVLRMQLGVSSYATMALREFMRIDTS 751
>UniRef50_UPI0000498330 Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 634
Score = 34.7 bits (76), Expect = 0.73
Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Frame = +2
Query: 2 LEKDGLDIK-LKNRVKTYSARGAVRRLVQRPHAASWALHRYXXXXXXXXXXXXXXXXXXX 178
L KDG + R+ + G R++V +P + + Y
Sbjct: 523 LSKDGFTLDTFPTRIYNVAITGDQRKIVIQPKGVEYQIVHYGNVGQDLLDERGYLR---- 578
Query: 179 PPAPQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALLSHPLK 328
+ + G L + L PS YATM+ REL+K T Q L+ +K
Sbjct: 579 --SDYQSGDRIGLWIKFQLEPSAYATMLFRELLKMPTDLDCQKQLTEEMK 626
>UniRef50_Q1DED6 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 94
Score = 34.7 bits (76), Expect = 0.73
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2
Query: 332 SSSADERVGPEPSTRCPSSSVRATSLWRSNWVAMSLSVIT 213
+S + R G PS+R PS RAT WR W M+ T
Sbjct: 16 ASGSSRRTGSSPSSRWPSRCWRATRWWRRCWTWMTSGATT 55
>UniRef50_A0BVU8 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_130,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 627
Score = 34.7 bits (76), Expect = 0.73
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +2
Query: 194 EDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQALLSHPLK 328
+ G Y+ LL L S YATM++REL K ++ Q LS K
Sbjct: 583 DQGTYQGLLFRFKLKKSSYATMLIRELTKCPSTLEFQQELSVEFK 627
>UniRef50_Q7QSM8 Cluster: GLP_618_4306_2270; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_618_4306_2270 - Giardia lamblia ATCC
50803
Length = 678
Score = 34.3 bits (75), Expect = 0.96
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 206 YEALLLTMTLPPSCYATMMLRELMKTDTSSRAQ-ALLSH 319
Y +L L +LP S YAT LREL+ T +Q +LL+H
Sbjct: 619 YRSLALRFSLPSSAYATEFLRELLGTTVDPDSQKSLLAH 657
>UniRef50_Q4Q4T4 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 709
Score = 34.3 bits (75), Expect = 0.96
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +2
Query: 197 DGKYEALL-LTMTLPPSCYATMMLRELMKTD 286
D Y + + L+ LPPSCYAT+ LRE++ D
Sbjct: 676 DAVYSSTMQLSFALPPSCYATVFLREVLGCD 706
>UniRef50_Q2FLI6 Cluster: Pseudouridylate synthase; n=1;
Methanospirillum hungatei JF-1|Rep: Pseudouridylate
synthase - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 422
Score = 33.9 bits (74), Expect = 1.3
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 215 LLLTMTLPPSCYATMMLRELMKTD 286
LL+ +LPP YAT +LRELMK D
Sbjct: 394 LLVRFSLPPGQYATTILRELMKAD 417
>UniRef50_Q4RHN6 Cluster: Chromosome 19 SCAF15045, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
SCAF15045, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 692
Score = 33.1 bits (72), Expect = 2.2
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 212 ALLLTMTLPPSCYATMMLRELMKTD 286
+L+L L SCYAT+ LRE+MK D
Sbjct: 667 SLMLNFDLDSSCYATICLREIMKCD 691
>UniRef50_O27572 Cluster: Probable tRNA pseudouridine synthase D;
n=3; Methanobacteriaceae|Rep: Probable tRNA
pseudouridine synthase D - Methanobacterium
thermoautotrophicum
Length = 415
Score = 33.1 bits (72), Expect = 2.2
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 209 EALLLTMTLPPSCYATMMLRELMKTD 286
E L + ++P CYAT +LRE+MK D
Sbjct: 388 EGLTVEFSIPRGCYATSVLREIMKKD 413
>UniRef50_A6C2P7 Cluster: tRNA pseudouridine synthase D; n=1;
Planctomyces maris DSM 8797|Rep: tRNA pseudouridine
synthase D - Planctomyces maris DSM 8797
Length = 356
Score = 32.7 bits (71), Expect = 2.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 209 EALLLTMTLPPSCYATMMLRELMKTDTSS 295
+ + TLP YATM+LRE MK +T++
Sbjct: 322 DGIQFDFTLPSGVYATMLLREFMKNETAA 350
>UniRef50_O67616 Cluster: tRNA pseudouridine synthase D; n=1;
Aquifex aeolicus|Rep: tRNA pseudouridine synthase D -
Aquifex aeolicus
Length = 385
Score = 32.7 bits (71), Expect = 2.9
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 212 ALLLTMTLPPSCYATMMLRELMKTDTSS 295
+L L+ TLPP YAT++LR+L +D S
Sbjct: 358 SLKLSFTLPPGSYATILLRKLFCSDVKS 385
>UniRef50_UPI00015B462C Cluster: PREDICTED: similar to transcription
factor GATA-4 (GATA binding factor-4); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to transcription
factor GATA-4 (GATA binding factor-4) - Nasonia
vitripennis
Length = 702
Score = 32.3 bits (70), Expect = 3.9
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -2
Query: 365 IARPREGRGTPSSSADERVGPEPSTRCPSSSVRATSLWRSN 243
I+RP R P +S G RC + S T+LWR N
Sbjct: 508 ISRPPTQRAKPKTSVPPTGGRRLGVRCANCSTTTTTLWRRN 548
>UniRef50_UPI0000F1DCAD Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 211
Score = 31.9 bits (69), Expect = 5.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 185 APQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSSRAQ 304
+P ++ L L L CYAT+ L E+MKT+ S Q
Sbjct: 172 SPSDESTTHCLSLNFDLETICYATVCLGEIMKTNLSQFTQ 211
>UniRef50_UPI0000E4808E Cluster: PREDICTED: similar to MGC83224
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC83224 protein -
Strongylocentrotus purpuratus
Length = 903
Score = 31.9 bits (69), Expect = 5.1
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 209 EALLLTMTLPPSCYATMMLRELMKT 283
+ L L+ LP SCYAT+ LREL K+
Sbjct: 879 KTLNLSFDLPASCYATVFLRELKKS 903
>UniRef50_Q6Z243 Cluster: Putative uncharacterized protein
OSJNBb0092C08.3; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBb0092C08.3 - Oryza sativa subsp. japonica (Rice)
Length = 239
Score = 31.9 bits (69), Expect = 5.1
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -2
Query: 347 GRGTPSSSADERVGPEPSTRCPSSSVRATSLWRSNWVAMSLSVIT 213
GR P R G E C SSS +S WR+ W A + T
Sbjct: 51 GRAPPGRGRCHRRGVEVDAPCASSSTTRSSSWRAPWRAAAAVAFT 95
>UniRef50_Q6NUP2 Cluster: Pseudouridylate synthase 7 homolog (S.
cerevisiae)-like; n=22; Tetrapoda|Rep: Pseudouridylate
synthase 7 homolog (S. cerevisiae)-like - Homo sapiens
(Human)
Length = 701
Score = 31.9 bits (69), Expect = 5.1
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 212 ALLLTMTLPPSCYATMMLRELMKTD 286
+LL++ L SCYAT+ L+E+MK D
Sbjct: 676 SLLISFDLDASCYATVCLKEIMKHD 700
>UniRef50_Q9RSX8 Cluster: tRNA pseudouridine synthase D; n=2;
Deinococcus|Rep: tRNA pseudouridine synthase D -
Deinococcus radiodurans
Length = 353
Score = 31.9 bits (69), Expect = 5.1
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 188 PQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTSS 295
P++DG +L TLP +AT +LRE+MKT+ +
Sbjct: 305 PEDDG----YVLAFTLPKGSFATSVLREVMKTEVDA 336
>UniRef50_A7HGV2 Cluster: tRNA pseudouridine synthase D TruD; n=4;
Cystobacterineae|Rep: tRNA pseudouridine synthase D TruD
- Anaeromyxobacter sp. Fw109-5
Length = 349
Score = 31.5 bits (68), Expect = 6.8
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 185 APQEDGKYEALLLTMTLPPSCYATMMLRELMK 280
AP EDG L T LP YAT+++RELMK
Sbjct: 311 APLEDG----YLATFELPKGSYATVVMRELMK 338
>UniRef50_A4INK9 Cluster: Spore coat protein B CotB; n=1;
Geobacillus thermodenitrificans NG80-2|Rep: Spore coat
protein B CotB - Geobacillus thermodenitrificans (strain
NG80-2)
Length = 397
Score = 31.5 bits (68), Expect = 6.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 229 DIATQLLRHNDVARTDEDGHLVEGSGPTLSSAEEDGVPRPSRGRAMNVT 375
D T++ HND+ E H + G T E D +P P +A NVT
Sbjct: 182 DATTEVTGHNDMEAASEAPH-IPGGEETHEDQEHDPLPPPVYVKAANVT 229
>UniRef50_Q4GZ59 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 1523
Score = 31.5 bits (68), Expect = 6.8
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 215 LLLTMTLPPSCYATMMLRELMKTDTSSRAQALLSHPL 325
L L+ LP S Y +M+LRE+ K+D +S L PL
Sbjct: 1418 LELSFQLPSSVYPSMLLREVTKSDVNSPDVVDLDRPL 1454
>UniRef50_A5HWL3 Cluster: Elongation factor 1-alpha; n=6; Gloeoporus
taxicola|Rep: Elongation factor 1-alpha - Gloeoporus
taxicola
Length = 97
Score = 31.5 bits (68), Expect = 6.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 365 IARPREGRGTPSSSADERVGPEPSTRCPSSSVRATSLWRS 246
+A + R P SS P PS CPS + T+ WRS
Sbjct: 23 LATTKSSRRXPPSSRRLVTTPRPSPSCPSLAGTVTTCWRS 62
>UniRef50_UPI00015A5025 Cluster: Hypothetical protein; n=1; Danio
rerio|Rep: Hypothetical protein - Danio rerio
Length = 545
Score = 31.1 bits (67), Expect = 8.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 185 APQEDGKYEALLLTMTLPPSCYATMMLRELMKTDTS 292
+P ++ L L L CYAT+ L E+MKT+ S
Sbjct: 510 SPSDESTTHCLSLNFDLETICYATVCLGEIMKTNLS 545
>UniRef50_UPI0000F32540 Cluster: PREDICTED: Bos taurus similar to
rabconnectin (LOC782535), mRNA.; n=3; Euteleostomi|Rep:
PREDICTED: Bos taurus similar to rabconnectin
(LOC782535), mRNA. - Bos Taurus
Length = 2865
Score = 31.1 bits (67), Expect = 8.9
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 179 PPAPQEDGKYEAL-LLTMTLPPSCYATMMLRELMKTDTSSRAQALLSHPLK 328
P Q+ G +EA +L+ TLP Y L ELM RA+A+LSH +K
Sbjct: 1169 PTVVQDGGLFEAAHVLSPTLPQ--YHPTQLLELMDLGKVRRAKAILSHLVK 1217
>UniRef50_Q2T4N1 Cluster: Polyketide synthase; n=2; Bacteria|Rep:
Polyketide synthase - Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 /CIP 106301)
Length = 5628
Score = 31.1 bits (67), Expect = 8.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 229 DIATQLLRHNDVARTDEDGHLVEGSGPTLSSAEEDG 336
D A+ + R VA D+DG+LV+ SGP A+ DG
Sbjct: 535 DTASSVYRAGRVA-LDDDGNLVDASGPHDEQADHDG 569
>UniRef50_Q0V0L0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 817
Score = 31.1 bits (67), Expect = 8.9
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 194 EDGKYEALLLTMTLPPSCYATMMLRELMK 280
E K A+++T+ L S YATM LRELMK
Sbjct: 774 EGEKKLAVVITLQLASSQYATMALRELMK 802
>UniRef50_Q0CDZ7 Cluster: Predicted protein; n=1; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 577
Score = 31.1 bits (67), Expect = 8.9
Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 347 GRGTPSSSADERVGPEPST-RCPSSSVRATSLWRSNWVAMSLSVITLHIY 201
G GT SSSA P PS+ + PSSS R T S+ VA S SVI Y
Sbjct: 482 GSGTASSSAS----PTPSSSKIPSSSARPTPSPSSSRVASSSSVIPTSSY 527
>UniRef50_A2QJX8 Cluster: Contig An04c0280, complete genome; n=7;
cellular organisms|Rep: Contig An04c0280, complete
genome - Aspergillus niger
Length = 327
Score = 31.1 bits (67), Expect = 8.9
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 271 TDEDGHLVEGSGPTLSSAEEDGVPRPSRGRAMNVT 375
TD DGHL EGSG + + + P RG VT
Sbjct: 203 TDGDGHLTEGSGYNIVLIKAGAIYTPDRGVLHGVT 237
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,447,402
Number of Sequences: 1657284
Number of extensions: 5151695
Number of successful extensions: 20233
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 19304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20220
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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