Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12m01r
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical pr... 254 6e-68
Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical pr... 254 6e-68
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 72 5e-13
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 72 5e-13
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 39 0.003
AF025461-8|AAB71000.1| 286|Caenorhabditis elegans Hypothetical ... 39 0.004
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 32 0.37
AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical ... 32 0.37
Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81453-4|CAB03794.1| 283|Caenorhabditis elegans Hypothetical pr... 29 4.6
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 4.6
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 4.6
AC025724-9|AAG23382.1| 77|Caenorhabditis elegans Hypothetical ... 29 4.6
Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate perme... 28 6.0
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 28 8.0
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 28 8.0
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 28 8.0
>Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical
protein T05H10.6b protein.
Length = 414
Score = 254 bits (621), Expect = 6e-68
Identities = 113/171 (66%), Positives = 140/171 (81%)
Frame = -2
Query: 737 NMSKLWDXPCVFVCENNGYGMGTSVDRSSASTEYYTRGDYVPGVWVDGMDVLATREAARF 558
NM+KLWD P +FVCENNG+GMGT+ +RSSASTEYYTRGDYVPG+WVDGMD+LA REA ++
Sbjct: 220 NMAKLWDLPVLFVCENNGFGMGTTAERSSASTEYYTRGDYVPGIWVDGMDILAVREATKW 279
Query: 557 AIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHE 378
A EYC++GKGPL+MEM TYRY GHSMSDPGTSYRTR+E+QEVR+TRDPIT FK++I+
Sbjct: 280 AKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSS 339
Query: 377 LVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLEPFVRG 225
L T ++LK ID +VRKEVDEA K + ++ + E L ADIY+ +RG
Sbjct: 340 LATEEELKAIDKEVRKEVDEALKIATSDGVLPPEALYADIYHNTPAQEIRG 390
>Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical
protein T05H10.6a protein.
Length = 397
Score = 254 bits (621), Expect = 6e-68
Identities = 113/171 (66%), Positives = 140/171 (81%)
Frame = -2
Query: 737 NMSKLWDXPCVFVCENNGYGMGTSVDRSSASTEYYTRGDYVPGVWVDGMDVLATREAARF 558
NM+KLWD P +FVCENNG+GMGT+ +RSSASTEYYTRGDYVPG+WVDGMD+LA REA ++
Sbjct: 203 NMAKLWDLPVLFVCENNGFGMGTTAERSSASTEYYTRGDYVPGIWVDGMDILAVREATKW 262
Query: 557 AIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHE 378
A EYC++GKGPL+MEM TYRY GHSMSDPGTSYRTR+E+QEVR+TRDPIT FK++I+
Sbjct: 263 AKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSYRTREEIQEVRKTRDPITGFKDRIITSS 322
Query: 377 LVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLEPFVRG 225
L T ++LK ID +VRKEVDEA K + ++ + E L ADIY+ +RG
Sbjct: 323 LATEEELKAIDKEVRKEVDEALKIATSDGVLPPEALYADIYHNTPAQEIRG 373
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 71.7 bits (168), Expect = 5e-13
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Frame = -2
Query: 740 YNMSKLWDXPCVFVCENNGYGMGTSVDRSSASTEYYTRGDY--VPGVWVDGMDVLATREA 567
+N + P +F C NNGY + T +G + + VDG D+LA A
Sbjct: 235 FNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAVYNA 294
Query: 566 ARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKIL 387
+ A + P+++E TYR HS SD T+YR+ DEVQ PIT FK+ I
Sbjct: 295 TKEARRVALTNR-PVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDKDHPITRFKKYIT 353
Query: 386 NHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIY 255
++ + +V+K V ++ + +L D+Y
Sbjct: 354 ERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKAHYHDLFEDVY 397
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 71.7 bits (168), Expect = 5e-13
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Frame = -2
Query: 740 YNMSKLWDXPCVFVCENNGYGMGTSVDRSSASTEYYTRGDY--VPGVWVDGMDVLATREA 567
+N + P +F C NNGY + T +G + + VDG D+LA A
Sbjct: 234 FNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAVYNA 293
Query: 566 ARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKIL 387
+ A + P+++E TYR HS SD T+YR+ DEVQ PIT FK+ I
Sbjct: 294 TKEARRVALTNR-PVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDKDHPITRFKKYIT 352
Query: 386 NHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIY 255
++ + +V+K V ++ + +L D+Y
Sbjct: 353 ERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKAHYHDLFEDVY 396
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Frame = -2
Query: 707 VFVCENNGYGMGTSVDRSSASTEYYTRGDYVPGV---WVDGMDVLATREAARFAIEYCNA 537
+ + NN G T RSS S+ Y T V G V+ D A A ++
Sbjct: 442 IHIVVNNQIGFTTD-PRSSRSSPYCTDVGRVVGCPIFHVNVDDPEAVMHVCNVAADWRKT 500
Query: 536 GKGPLVMEMETYRYSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQL 357
K +++++ YR GH+ D + Q ++QT+ + ++EKILN + +
Sbjct: 501 FKKDVIVDLVCYRRHGHNELDE-PMFTQPLMYQRIKQTKTALEKYQEKILNEGVANEQYV 559
Query: 356 KDIDAKVRKEVDEATKQSK 300
K+ K +++A + ++
Sbjct: 560 KEELTKYGSILEDAYENAQ 578
>AF025461-8|AAB71000.1| 286|Caenorhabditis elegans Hypothetical
protein M01D1.9 protein.
Length = 286
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -2
Query: 389 LNH--ELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYK-NLEPFVRGIH 219
LNH +++P + V E DEA +S +E E + +Y+K ++PF + I+
Sbjct: 102 LNHFLSIISPSNIDLFHFPVYNEFDEAQFKSLSECLESHEIYNLHVYWKFEMDPFFKVIN 161
Query: 218 PAAPLKHLEVQPRNH 174
P KHL++ P H
Sbjct: 162 AFLPTKHLKIHPTFH 176
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -2
Query: 410 TSFKEKILNHELVTPDQLKDIDAKV-RKEVDEATKQSKTEPEVGIEELSADIYYKNLE 240
TS +++N ++L++ +V K+V+ TKQ+K E E + + ++YYKNL+
Sbjct: 261 TSDLNEVVNALYEGFEELQEEKLRVLSKQVERKTKQAKVEEERKLIDQQNEVYYKNLK 318
>AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical
protein F28H6.6 protein.
Length = 740
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -2
Query: 434 VRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIY 255
+RQTR+ + + +L + K A ++KE + TK +K E I EL +
Sbjct: 361 IRQTRETLDIELQIMLKDSINPKSHAKTFAALLKKERETRTKHAKVFMEAKINELDMGNF 420
Query: 254 YKNLEPF 234
Y+ + F
Sbjct: 421 YETYDSF 427
>Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical
protein K02B12.8 protein.
Length = 387
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 456 DERRGAGGEADQRPHHFVQGEDLESRARHARSAQGYRRQGT*RSRR 319
D GG + R HHF Q + A++ RSA G+ RQ RR
Sbjct: 318 DSSLPTGGGSAIRVHHFKQNSRITPIAQNRRSAAGFDRQQIQEMRR 363
>Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical
protein F10A3.11 protein.
Length = 284
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 671 TSVDRSSASTEYYTRGDYVPGVWVDG 594
+S DR+ A+ EY G+Y VW+DG
Sbjct: 192 SSEDRTRAAKEYGDVGNYQSYVWIDG 217
>Z81453-4|CAB03794.1| 283|Caenorhabditis elegans Hypothetical
protein B0250.6 protein.
Length = 283
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 109 NTFVIFFNCGIYMAIPLVEIIYFCNGNTICYLR 11
N +++F CG + PL + YFC N+ CY R
Sbjct: 139 NQYMLFGYCGNVLETPLECVNYFCAVNS-CYYR 170
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 28.7 bits (61), Expect = 4.6
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = -2
Query: 440 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEV-DEATKQSKTEP-EVGIEELS 267
Q ++ + IT+F+ K+ +T ++ K A+V ++ D A S+ + V EEL+
Sbjct: 1238 QRPQEALNVITAFEAKL---NKLTEERNKMRKARVALDLSDSAHAPSEGDKLTVATEELA 1294
Query: 266 A--DIYYKNLEPFVRGIHPAAPLKHLEVQPR 180
A D++ K L+P GI A L VQPR
Sbjct: 1295 AMKDVW-KALQPVYTGIDEAKEKTWLSVQPR 1324
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 28.7 bits (61), Expect = 4.6
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = -2
Query: 440 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEV-DEATKQSKTEP-EVGIEELS 267
Q ++ + IT+F+ K+ +T ++ K A+V ++ D A S+ + V EEL+
Sbjct: 1238 QRPQEALNVITAFEAKL---NKLTEERNKMRKARVALDLSDSAHAPSEGDKLTVATEELA 1294
Query: 266 A--DIYYKNLEPFVRGIHPAAPLKHLEVQPR 180
A D++ K L+P GI A L VQPR
Sbjct: 1295 AMKDVW-KALQPVYTGIDEAKEKTWLSVQPR 1324
>AC025724-9|AAG23382.1| 77|Caenorhabditis elegans Hypothetical
protein Y67D8C.1 protein.
Length = 77
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -2
Query: 392 ILNHELVTP--DQLKDIDAKVRKEVDEATKQSKTEPE 288
I N + TP DQ+KDID+K +K + T + K EP+
Sbjct: 8 IENTHVTTPIIDQIKDIDSKNKKNIQ--TVREKNEPK 42
>Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical
protein F08H9.1 protein.
Length = 607
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -2
Query: 497 YSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHEL--VTPDQLKDIDAKVRKEV 324
YS DP YR +V +++ +PI F K N ++ + + + D+ + +V
Sbjct: 357 YSSLHFKDPEPLYRKTSKVMNLKELLNPIPYFLRKGCNTDMWDLFKVKTRKFDSTIGHDV 416
Query: 323 DEATKQSKTEPEVGIEELSADI 258
+ ++ + E L A++
Sbjct: 417 SDTEEEDEDEETERRNRLKAEL 438
>AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate permease
family protein 6 protein.
Length = 823
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 293 PEVGIEELSADIYYKNLEPFVRGIHPAAPLKHLEVQ 186
P + I + IY+ N E FVR IH A L L V+
Sbjct: 560 PGIKIFRFDSPIYFGNSEMFVRKIHQACGLNPLIVR 595
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 440 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSAD 261
+ +R++ +KEK+ + L L IDA RK + E SK EEL
Sbjct: 575 ESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS-RKRIAELELSSKESENRSSEELEEQ 633
Query: 260 -IYYKNL 243
+YY ++
Sbjct: 634 RLYYVSM 640
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 440 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSAD 261
+ +R++ +KEK+ + L L IDA RK + E SK EEL
Sbjct: 575 ESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS-RKRIAELELSSKESENRSSEELEEQ 633
Query: 260 -IYYKNL 243
+YY ++
Sbjct: 634 RLYYVSM 640
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 440 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSAD 261
+ +R++ +KEK+ + L L IDA RK + E SK EEL
Sbjct: 573 ESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS-RKRIAELELSSKESENRSSEELEEQ 631
Query: 260 -IYYKNL 243
+YY ++
Sbjct: 632 RLYYVSM 638
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,463,713
Number of Sequences: 27780
Number of extensions: 318258
Number of successful extensions: 1559
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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