Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12m01f
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    24   0.93 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   2.8  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   3.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   3.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   3.8  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   5.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.7  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 621 KCMEPPLPREQPVLRPVSSESTPS 550
           KC +P  P   PV +PVS ES P+
Sbjct: 36  KCPKPA-PIYSPVSKPVSFESLPN 58


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 202 ESDCTGCSDKRK 237
           E+DC+ CS+K+K
Sbjct: 74  ETDCSKCSEKQK 85


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 202 ESDCTGCSDKRKIQHEK 252
           +SDC  CS+K+K   +K
Sbjct: 67  KSDCAKCSEKQKEMTKK 83


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 261 VASFFVLYFAFVATTGAVTFVI 196
           V  F+V+  AF+ T GA+  ++
Sbjct: 100 VQKFYVVILAFLLTAGAIISLV 121


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 261 VASFFVLYFAFVATTGAVTFVI 196
           V  F+V+  AF+ T GA+  ++
Sbjct: 26  VQKFYVVILAFLLTAGAIISLV 47


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 600 PREQPVLRPVSSESTPSTLTPM 535
           PREQP++      +TP  L  M
Sbjct: 44  PREQPIVAMFEVNNTPEILQLM 65


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 583 DRLLPGQGRFHAFG 624
           D  LPGQGR +  G
Sbjct: 33  DGFLPGQGRVNQLG 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,195
Number of Sequences: 336
Number of extensions: 3114
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)