Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12m01f
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   1.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   1.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.7  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.3  
AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical prote...    23   6.3  
AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosens...    23   6.3  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 595 GATGPAPRQLREHPQHTNAHEI 530
           G+ GP P Q   H QH + H++
Sbjct: 82  GSDGPMPAQPPHHHQHPHHHQL 103


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 595 GATGPAPRQLREHPQHTNAHEI 530
           G+ GP P Q   H QH + H++
Sbjct: 82  GSDGPMPAQPPHHHQHPHHHQL 103


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +2

Query: 95   LQKDH*INLGFIEIIIDKMSKLIPSAAKFLAGNTITKVTAPVVATNAKYSTKKEATFEIK 274
            LQK   + +GF  +I+     LI  +A       I + TA   + N  +ST++ + F +K
Sbjct: 2993 LQKGF-LTVGFYSLIVSLRMSLISESA-------IPEFTAAEASINVLFSTEQFSDFIVK 3044

Query: 275  P 277
            P
Sbjct: 3045 P 3045


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 436 VFRTRSRGSRYESSDARCR-LSNHRVSLSR 522
           V R+RSRGSR  S  ++ R  S  R S SR
Sbjct: 428 VSRSRSRGSRSRSRTSQSRSRSKTRTSRSR 457


>AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical protein
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 205 SDCTGCSDKRKIQHEK 252
           SDC  CS+K++I  +K
Sbjct: 72  SDCVKCSEKQRIGSDK 87


>AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosensory
           protein CSP3 protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 205 SDCTGCSDKRKIQHEK 252
           SDC  CS+K++I  +K
Sbjct: 72  SDCVKCSEKQRIGSDK 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,225
Number of Sequences: 2352
Number of extensions: 12652
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)