Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12m01f
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-669|AAN09129.1|  399|Drosophila melanogaster CG7010-PD,...   195   4e-50
AE014298-668|AAF45976.1|  399|Drosophila melanogaster CG7010-PA,...   195   4e-50
AE014298-667|AAF45977.1|  443|Drosophila melanogaster CG7010-PC,...   195   4e-50
BT010310-1|AAQ23628.1|  479|Drosophila melanogaster AT31065p pro...   165   3e-41
AE014298-671|AAF45979.1|  479|Drosophila melanogaster CG7024-PA ...   165   3e-41
BT010068-1|AAQ22537.1|  328|Drosophila melanogaster LD13846p pro...   152   5e-37
AE014298-670|AAF45978.1|  328|Drosophila melanogaster CG7010-PB,...   152   5e-37
AF145620-1|AAD38595.1|  749|Drosophila melanogaster BcDNA.GH0392...    33   0.33 
AE014134-113|AAF51490.1|  749|Drosophila melanogaster CG4184-PA ...    33   0.33 
X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of ...    30   2.3  
AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA...    30   2.3  
BT011441-1|AAR99099.1|  525|Drosophila melanogaster RE55714p pro...    30   3.1  
AE014297-886|AAF54342.1| 1342|Drosophila melanogaster CG9746-PA ...    30   3.1  
AY122111-1|AAM52623.1|  276|Drosophila melanogaster GH12454p pro...    29   7.1  
AE014134-3047|AAF53765.1|  276|Drosophila melanogaster CG10691-P...    29   7.1  
AE014134-3046|AAN11026.1|  276|Drosophila melanogaster CG10691-P...    29   7.1  

>AE014298-669|AAN09129.1|  399|Drosophila melanogaster CG7010-PD,
           isoform D protein.
          Length = 399

 Score =  195 bits (476), Expect = 4e-50
 Identities = 93/138 (67%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
 Frame = +2

Query: 212 APVVATNAKYSTKKEATFEI-KPYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETA 388
           A V  TN  Y+T  EAT ++ +P+KLH+LD+GPAT   LT + ALK Y Q+  +RR+ETA
Sbjct: 25  AGVSKTN-NYAT--EATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETA 81

Query: 389 SGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADSVITAYRCHGWTYLMGVSVLGVLSE 568
           +GNLYKEKIIRGFCHLYSGQEA AVGM+AAMRD D++I+AYR HGWTYLMGVS  GVL+E
Sbjct: 82  AGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAE 141

Query: 569 LTGRRTGCSRGKGGSMHL 622
           LTG + GC+RGKGGSMH+
Sbjct: 142 LTGVQGGCARGKGGSMHM 159


>AE014298-668|AAF45976.1|  399|Drosophila melanogaster CG7010-PA,
           isoform A protein.
          Length = 399

 Score =  195 bits (476), Expect = 4e-50
 Identities = 93/138 (67%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
 Frame = +2

Query: 212 APVVATNAKYSTKKEATFEI-KPYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETA 388
           A V  TN  Y+T  EAT ++ +P+KLH+LD+GPAT   LT + ALK Y Q+  +RR+ETA
Sbjct: 25  AGVSKTN-NYAT--EATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETA 81

Query: 389 SGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADSVITAYRCHGWTYLMGVSVLGVLSE 568
           +GNLYKEKIIRGFCHLYSGQEA AVGM+AAMRD D++I+AYR HGWTYLMGVS  GVL+E
Sbjct: 82  AGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAE 141

Query: 569 LTGRRTGCSRGKGGSMHL 622
           LTG + GC+RGKGGSMH+
Sbjct: 142 LTGVQGGCARGKGGSMHM 159


>AE014298-667|AAF45977.1|  443|Drosophila melanogaster CG7010-PC,
           isoform C protein.
          Length = 443

 Score =  195 bits (476), Expect = 4e-50
 Identities = 93/138 (67%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
 Frame = +2

Query: 212 APVVATNAKYSTKKEATFEI-KPYKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETA 388
           A V  TN  Y+T  EAT ++ +P+KLH+LD+GPAT   LT + ALK Y Q+  +RR+ETA
Sbjct: 69  AGVSKTN-NYAT--EATVQVNRPFKLHRLDEGPATEVKLTKDQALKYYTQMQTIRRLETA 125

Query: 389 SGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADSVITAYRCHGWTYLMGVSVLGVLSE 568
           +GNLYKEKIIRGFCHLYSGQEA AVGM+AAMRD D++I+AYR HGWTYLMGVS  GVL+E
Sbjct: 126 AGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVSPSGVLAE 185

Query: 569 LTGRRTGCSRGKGGSMHL 622
           LTG + GC+RGKGGSMH+
Sbjct: 186 LTGVQGGCARGKGGSMHM 203


>BT010310-1|AAQ23628.1|  479|Drosophila melanogaster AT31065p
           protein.
          Length = 479

 Score =  165 bits (402), Expect = 3e-41
 Identities = 73/115 (63%), Positives = 89/115 (77%)
 Frame = +2

Query: 278 YKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAV 457
           +K + L+ GP     L+ EDAL +Y Q+  LRR ET +GN YKE+ IRGFCHLY+GQEAV
Sbjct: 43  FKCYDLENGPTMDVELSREDALTMYTQMLELRRFETVAGNYYKERKIRGFCHLYNGQEAV 102

Query: 458 AVGMRAAMRDADSVITAYRCHGWTYLMGVSVLGVLSELTGRRTGCSRGKGGSMHL 622
           AVGM+  +R  DSVITAYRCH WTYLMGVS+  +++EL G RTGCSRGKGGSMH+
Sbjct: 103 AVGMKQRLRSCDSVITAYRCHAWTYLMGVSLYEIMAELFGVRTGCSRGKGGSMHM 157


>AE014298-671|AAF45979.1|  479|Drosophila melanogaster CG7024-PA
           protein.
          Length = 479

 Score =  165 bits (402), Expect = 3e-41
 Identities = 73/115 (63%), Positives = 89/115 (77%)
 Frame = +2

Query: 278 YKLHKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAV 457
           +K + L+ GP     L+ EDAL +Y Q+  LRR ET +GN YKE+ IRGFCHLY+GQEAV
Sbjct: 43  FKCYDLENGPTMDVELSREDALTMYTQMLELRRFETVAGNYYKERKIRGFCHLYNGQEAV 102

Query: 458 AVGMRAAMRDADSVITAYRCHGWTYLMGVSVLGVLSELTGRRTGCSRGKGGSMHL 622
           AVGM+  +R  DSVITAYRCH WTYLMGVS+  +++EL G RTGCSRGKGGSMH+
Sbjct: 103 AVGMKQRLRSCDSVITAYRCHAWTYLMGVSLYEIMAELFGVRTGCSRGKGGSMHM 157


>BT010068-1|AAQ22537.1|  328|Drosophila melanogaster LD13846p
           protein.
          Length = 328

 Score =  152 bits (368), Expect = 5e-37
 Identities = 67/85 (78%), Positives = 78/85 (91%)
 Frame = +2

Query: 368 LRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADSVITAYRCHGWTYLMGVS 547
           +RR+ETA+GNLYKEKIIRGFCHLYSGQEA AVGM+AAMRD D++I+AYR HGWTYLMGVS
Sbjct: 4   IRRLETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVS 63

Query: 548 VLGVLSELTGRRTGCSRGKGGSMHL 622
             GVL+ELTG + GC+RGKGGSMH+
Sbjct: 64  PSGVLAELTGVQGGCARGKGGSMHM 88


>AE014298-670|AAF45978.1|  328|Drosophila melanogaster CG7010-PB,
           isoform B protein.
          Length = 328

 Score =  152 bits (368), Expect = 5e-37
 Identities = 67/85 (78%), Positives = 78/85 (91%)
 Frame = +2

Query: 368 LRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMRDADSVITAYRCHGWTYLMGVS 547
           +RR+ETA+GNLYKEKIIRGFCHLYSGQEA AVGM+AAMRD D++I+AYR HGWTYLMGVS
Sbjct: 4   IRRLETAAGNLYKEKIIRGFCHLYSGQEACAVGMKAAMRDVDNIISAYRVHGWTYLMGVS 63

Query: 548 VLGVLSELTGRRTGCSRGKGGSMHL 622
             GVL+ELTG + GC+RGKGGSMH+
Sbjct: 64  PSGVLAELTGVQGGCARGKGGSMHM 88


>AF145620-1|AAD38595.1|  749|Drosophila melanogaster BcDNA.GH03922
           protein.
          Length = 749

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 613 GTSLAPGATGPAPRQLREHPQHTNAHEISPSVTTIR 506
           G + APGA GP P Q++  P + NA +  P +  I+
Sbjct: 235 GPNAAPGAGGPGPNQMQGGPMNVNAMQQMPPMQQIQ 270


>AE014134-113|AAF51490.1|  749|Drosophila melanogaster CG4184-PA
           protein.
          Length = 749

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 613 GTSLAPGATGPAPRQLREHPQHTNAHEISPSVTTIR 506
           G + APGA GP P Q++  P + NA +  P +  I+
Sbjct: 235 GPNAAPGAGGPGPNQMQGGPMNVNAMQQMPPMQQIQ 270


>X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of
           variegation protein3-7 protein.
          Length = 1169

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/67 (25%), Positives = 30/67 (44%)
 Frame = +3

Query: 213 HRL*RQTQNTARKKRRHSKSSPTNSINWIRALQHQPHSLLKMLLSCMNN*RYCGGLKPHQ 392
           H    ++   A K++R S++   N+ NW+R L+  P     M    +   R C      +
Sbjct: 189 HEFGTKSYVAAMKQKRISETEAFNNFNWLRWLRWHPWLERSMPTGTIGTCRICSVRMNVE 248

Query: 393 ETYIKKR 413
             Y++KR
Sbjct: 249 FVYLRKR 255


>AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA
           protein.
          Length = 1250

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/67 (25%), Positives = 30/67 (44%)
 Frame = +3

Query: 213 HRL*RQTQNTARKKRRHSKSSPTNSINWIRALQHQPHSLLKMLLSCMNN*RYCGGLKPHQ 392
           H    ++   A K++R S++   N+ NW+R L+  P     M    +   R C      +
Sbjct: 270 HEFGTKSYVAAMKQKRISETEAFNNFNWLRWLRWHPWLERSMPTGTIGTCRICSVRMNVE 329

Query: 393 ETYIKKR 413
             Y++KR
Sbjct: 330 FVYLRKR 336


>BT011441-1|AAR99099.1|  525|Drosophila melanogaster RE55714p
           protein.
          Length = 525

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +2

Query: 200 TKVTA-PVVATNAKYSTKKEATFEIKPYKLHKLDQGPATSATLTSEDALKLYEQLTILRR 376
           TK+ A  ++   +KY+T +     I PY LH   + PA       E    L   L +++ 
Sbjct: 413 TKIAALELLQKLSKYTTSETILDRILPYILHLAQKSPAKVQVQAIE---TLTACLGMVKD 469

Query: 377 IETASGNLYKEKIIRGFCHLYSGQEAVAV 463
           I  +  N++ E I+     L S   AV V
Sbjct: 470 IPRSDANVFPEYILPSITDLASETSAVIV 498


>AE014297-886|AAF54342.1| 1342|Drosophila melanogaster CG9746-PA
           protein.
          Length = 1342

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
 Frame = +2

Query: 200 TKVTA-PVVATNAKYSTKKEATFEIKPYKLHKLDQGPATSATLTSEDALKLYEQLTILRR 376
           TK+ A  ++   +KY+T +     I PY LH   + PA       E    L   L +++ 
Sbjct: 413 TKIAALELLQKLSKYTTSETILDRILPYILHLAQKSPAKVQVQAIE---TLTACLGMVKD 469

Query: 377 IETASGNLYKEKIIRGFCHLYSGQEAVAV 463
           I  +  N++ E I+     L S   AV V
Sbjct: 470 IPRSDANVFPEYILPSITDLASETSAVIV 498


>AY122111-1|AAM52623.1|  276|Drosophila melanogaster GH12454p
           protein.
          Length = 276

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 299 QGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAV 457
           +G A +A L ++   +  + L  LRRIE A    Y+    RG  +L SGQ  +
Sbjct: 215 EGDAEAAGLLAKSFGEAGDGLVELRRIEAAEDIAYQLSRSRGVAYLPSGQSTL 267


>AE014134-3047|AAF53765.1|  276|Drosophila melanogaster CG10691-PB,
           isoform B protein.
          Length = 276

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 299 QGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAV 457
           +G A +A L ++   +  + L  LRRIE A    Y+    RG  +L SGQ  +
Sbjct: 215 EGDAEAAGLLAKSFGEAGDGLVELRRIEAAEDIAYQLSRSRGVAYLPSGQSTL 267


>AE014134-3046|AAN11026.1|  276|Drosophila melanogaster CG10691-PA,
           isoform A protein.
          Length = 276

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 299 QGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAV 457
           +G A +A L ++   +  + L  LRRIE A    Y+    RG  +L SGQ  +
Sbjct: 215 EGDAEAAGLLAKSFGEAGDGLVELRRIEAAEDIAYQLSRSRGVAYLPSGQSTL 267


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,720,889
Number of Sequences: 53049
Number of extensions: 586266
Number of successful extensions: 1931
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1931
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)