Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12l20r
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 228 1e-59
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 228 1e-59
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 228 1e-59
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 228 1e-59
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 228 1e-59
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 228 1e-59
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 228 1e-59
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 228 1e-59
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 228 1e-59
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 228 1e-59
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 228 1e-59
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 228 1e-59
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 228 1e-59
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 228 1e-59
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 227 4e-59
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 225 1e-58
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 223 5e-58
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 150 5e-36
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 77 8e-14
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 77 8e-14
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 58 2e-08
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.045
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.045
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 38 0.045
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 38 0.045
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 38 0.045
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 38 0.045
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 3.0
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 3.0
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 3.0
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 3.0
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 3.0
BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein. 31 3.9
AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo pr... 31 3.9
AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens ... 31 3.9
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 5.2
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 228 bits (558), Expect = 1e-59
Identities = 113/209 (54%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 227 bits (554), Expect = 4e-59
Identities = 112/209 (53%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG++ +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYERVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 225 bits (550), Expect = 1e-58
Identities = 112/209 (53%), Positives = 136/209 (65%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 IGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 223 bits (545), Expect = 5e-58
Identities = 111/209 (53%), Positives = 135/209 (64%), Gaps = 1/209 (0%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 511
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVG
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVG 168
Query: 510 ASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 331
ASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LD E L ++F GV NVA++ L
Sbjct: 169 ASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQ 228
Query: 330 IGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXX 154
GYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 229 TGYPTVASVPHSIINGYKRVLALSVETDYTFPLAENVKAFLADPSAFVAAAPVAADTTAA 288
Query: 153 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 289 PAAAAAPAKVEAKEESEESDEDMGFGLFD 317
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 150 bits (363), Expect = 5e-36
Identities = 75/156 (48%), Positives = 93/156 (59%), Gaps = 1/156 (0%)
Frame = -3
Query: 531 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVAN 352
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV N
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 351 VAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-X 175
VA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPV 121
Query: 174 XXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 122 AAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 157
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 76.6 bits (180), Expect = 8e-14
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 550
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 109 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 69.7 bits (163), Expect = 9e-12
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -3
Query: 363 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXX 184
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 156 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 215
Query: 183 XX-XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 216 AAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 255
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 76.6 bits (180), Expect = 8e-14
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -3
Query: 690 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 550
A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 108 AAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
Score = 69.7 bits (163), Expect = 9e-12
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -3
Query: 363 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXX 184
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 155 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 214
Query: 183 XX-XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 67
SD+DMGFGLFD
Sbjct: 215 AAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 254
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 58.4 bits (135), Expect = 2e-08
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = -3
Query: 363 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 190
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 58
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -3
Query: 594 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 415
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 414 PEILDIKPE 388
++ D PE
Sbjct: 216 QQMGDDLPE 224
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -3
Query: 594 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 415
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 414 PEILDIKPE 388
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -3
Query: 594 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 415
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 414 PEILDIKPE 388
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -3
Query: 594 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 415
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 414 PEILDIKPE 388
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -3
Query: 594 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 415
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 414 PEILDIKPE 388
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.045
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = -3
Query: 594 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 415
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 414 PEILDIKPE 388
++ D PE
Sbjct: 216 QQMGDDLPE 224
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.5 bits (68), Expect = 3.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 347 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 526
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 249 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 307
Query: 527 GFKMCTSL 550
G +S+
Sbjct: 308 GLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.5 bits (68), Expect = 3.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 347 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 526
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 527 GFKMCTSL 550
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.5 bits (68), Expect = 3.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 347 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 526
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 527 GFKMCTSL 550
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.5 bits (68), Expect = 3.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 347 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 526
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 527 GFKMCTSL 550
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.5 bits (68), Expect = 3.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +2
Query: 347 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 526
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 527 GFKMCTSL 550
G +S+
Sbjct: 273 GLSTSSSV 280
>BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein.
Length = 568
Score = 31.1 bits (67), Expect = 3.9
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -3
Query: 513 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 337
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo
protein.
Length = 571
Score = 31.1 bits (67), Expect = 3.9
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -3
Query: 513 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 337
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ40219 fis, clone TESTI2021637, moderately
similar to LIVER CARBOXYLESTERASE PRECURSOR (EC
3.1.1.1). ).
Length = 207
Score = 31.1 bits (67), Expect = 3.9
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -3
Query: 513 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 337
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 85 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 139
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 431 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 550
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,700,927
Number of Sequences: 237096
Number of extensions: 1945968
Number of successful extensions: 4462
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 4308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4441
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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