Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12l20f
(587 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 0.96
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 1.3
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 24 1.3
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 23 2.2
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 22 3.9
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 5.1
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 5.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 5.1
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 6.8
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 6.8
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 6.8
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 9.0
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 9.0
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.2 bits (50), Expect = 0.96
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +2
Query: 239 LQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQGQRWLR 358
LQ H + Q H RP QQ ++ Q +R LR
Sbjct: 144 LQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQEERRLR 183
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 80 GVGTSMKFKDKTKRTTSVRDKFKKKK 3
GV S+ FKD + T +K +KKK
Sbjct: 436 GVIKSVTFKDTQGKVTKAAEKAQKKK 461
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = -2
Query: 571 MCTSLMISIVPFEILVGIERAWKKEVFSGPRPVLWAGMTTD 449
+C ++ + + L WK GP+PV + G T D
Sbjct: 8 LCGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKD 48
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 80 GVGTSMKFKDKTKRTTSVRDKFKKKK 3
GV ++ FKD + T +K +KKK
Sbjct: 436 GVIKAVTFKDAAGKVTKAAEKAQKKK 461
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 22.2 bits (45), Expect = 3.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 367 RVNTKPTLPLMCGNSFSRAGLL 302
R +T P +CG +FSR LL
Sbjct: 37 RTHTLPCKCHLCGKAFSRPWLL 58
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 5.1
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 334 CGNSFSRAGLLSRWSLMALRIIVFF-PMSTIL 242
CG + GLLS L+ I V+F P+ I+
Sbjct: 202 CGTDYFNRGLLSASYLVCYGIWVYFVPLFLII 233
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.8 bits (44), Expect = 5.1
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 334 CGNSFSRAGLLSRWSLMALRIIVFF-PMSTIL 242
CG + GLLS L+ I V+F P+ I+
Sbjct: 78 CGTDYFNRGLLSASYLVCYGIWVYFVPLFLII 109
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 500 FLPGSFYPYQDFKGYY*NHQ 559
FLP S++P+Q Y H+
Sbjct: 311 FLPPSYHPHQHHPSQYHPHR 330
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 6.8
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 584 TGLQDVYIVDDFN 546
TG+ D+++ DD N
Sbjct: 114 TGISDLFVFDDLN 126
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.4 bits (43), Expect = 6.8
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +3
Query: 117 WKSNYFVKIIQLLDEYP 167
W+ F ++++LDE+P
Sbjct: 862 WRHWKFPNLVEVLDEFP 878
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 21.4 bits (43), Expect = 6.8
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -3
Query: 429 DELELGLCSPTVCHGPQR 376
D +E G+ PT C G +
Sbjct: 361 DAVEYGIIGPTTCMGDHK 378
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +2
Query: 260 KKHNDAQSHQRPPGQQSSPRETVATHQG 343
++ + A S Q PG ++ HQG
Sbjct: 207 QQQSQAASQQSQPGMHPRQQQQAQQHQG 234
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -3
Query: 285 WLCASLCFFP*ARYWSHV 232
W+C+S FP +W V
Sbjct: 171 WICSSAISFPAIVWWRAV 188
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,103
Number of Sequences: 438
Number of extensions: 4111
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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