Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12l07f
(534 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X86556-1|CAA60253.1| 655|Homo sapiens very-long-chain acyl-CoA ... 76 7e-14
L46590-1|AAA79002.1| 655|Homo sapiens long chain acyl-CoA dehyd... 76 7e-14
D78298-1|BAA29057.1| 655|Homo sapiens very-long-chain acyl-CoA ... 76 7e-14
D43682-1|BAA07781.1| 655|Homo sapiens VLACD protein. 76 7e-14
BC012912-1|AAH12912.1| 655|Homo sapiens acyl-Coenzyme A dehydro... 76 7e-14
BC000399-1|AAH00399.1| 655|Homo sapiens acyl-Coenzyme A dehydro... 76 7e-14
AK222518-1|BAD96238.1| 655|Homo sapiens acyl-Coenzyme A dehydro... 76 7e-14
BC020218-1|AAH20218.1| 633|Homo sapiens acyl-Coenzyme A dehydro... 75 1e-13
BC013354-1|AAH13354.1| 621|Homo sapiens acyl-Coenzyme A dehydro... 56 6e-08
BC007970-1|AAH07970.1| 621|Homo sapiens acyl-Coenzyme A dehydro... 56 6e-08
AK024012-1|BAB14775.1| 621|Homo sapiens protein ( Homo sapiens ... 56 6e-08
AF327351-1|AAL56011.1| 621|Homo sapiens very-long-chain acyl-Co... 56 6e-08
AB209427-1|BAD92664.1| 274|Homo sapiens acyl-Coenzyme A dehydro... 42 0.002
AK095895-1|BAC04644.1| 238|Homo sapiens protein ( Homo sapiens ... 31 3.4
BC119680-1|AAI19681.1| 316|Homo sapiens ZNF101 protein protein. 29 7.8
BC011502-1|AAH11502.2| 373|Homo sapiens ZNF101 protein protein. 29 7.8
AY149174-1|AAN46749.1| 436|Homo sapiens zinc finger protein 12 ... 29 7.8
AL096747-1|CAB46422.1| 232|Homo sapiens hypothetical protein pr... 29 7.8
>X86556-1|CAA60253.1| 655|Homo sapiens very-long-chain acyl-CoA
dehydrogenase protein.
Length = 655
Score = 76.2 bits (179), Expect = 7e-14
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +3
Query: 246 SAASEAQARNGPR--QSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVEKFF 419
S S+A R P +S SF + +F+G+ QVFP+P L+++Q Q L+ELV PV +FF
Sbjct: 54 SHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFF 113
Query: 420 QEVNDPAKNDENSKIE 467
+EVNDPAKND +E
Sbjct: 114 EEVNDPAKNDALEMVE 129
Score = 36.3 bits (80), Expect = 0.068
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 418 FKK*MTPLRMMRIQRLXEGTVAGLWDLGAFGLQVPGELG 534
F++ P + ++ + E T GL +LGAFGLQVP ELG
Sbjct: 113 FEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELG 151
>L46590-1|AAA79002.1| 655|Homo sapiens long chain acyl-CoA
dehydrogenase protein.
Length = 655
Score = 76.2 bits (179), Expect = 7e-14
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +3
Query: 246 SAASEAQARNGPR--QSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVEKFF 419
S S+A R P +S SF + +F+G+ QVFP+P L+++Q Q L+ELV PV +FF
Sbjct: 54 SHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFF 113
Query: 420 QEVNDPAKNDENSKIE 467
+EVNDPAKND +E
Sbjct: 114 EEVNDPAKNDALEMVE 129
Score = 36.3 bits (80), Expect = 0.068
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 418 FKK*MTPLRMMRIQRLXEGTVAGLWDLGAFGLQVPGELG 534
F++ P + ++ + E T GL +LGAFGLQVP ELG
Sbjct: 113 FEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELG 151
>D78298-1|BAA29057.1| 655|Homo sapiens very-long-chain acyl-CoA
dehydrogenase protein.
Length = 655
Score = 76.2 bits (179), Expect = 7e-14
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +3
Query: 246 SAASEAQARNGPR--QSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVEKFF 419
S S+A R P +S SF + +F+G+ QVFP+P L+++Q Q L+ELV PV +FF
Sbjct: 54 SHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFF 113
Query: 420 QEVNDPAKNDENSKIE 467
+EVNDPAKND +E
Sbjct: 114 EEVNDPAKNDALEMVE 129
Score = 36.3 bits (80), Expect = 0.068
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 418 FKK*MTPLRMMRIQRLXEGTVAGLWDLGAFGLQVPGELG 534
F++ P + ++ + E T GL +LGAFGLQVP ELG
Sbjct: 113 FEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELG 151
>D43682-1|BAA07781.1| 655|Homo sapiens VLACD protein.
Length = 655
Score = 76.2 bits (179), Expect = 7e-14
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +3
Query: 246 SAASEAQARNGPR--QSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVEKFF 419
S S+A R P +S SF + +F+G+ QVFP+P L+++Q Q L+ELV PV +FF
Sbjct: 54 SHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFF 113
Query: 420 QEVNDPAKNDENSKIE 467
+EVNDPAKND +E
Sbjct: 114 EEVNDPAKNDALEMVE 129
Score = 36.3 bits (80), Expect = 0.068
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 418 FKK*MTPLRMMRIQRLXEGTVAGLWDLGAFGLQVPGELG 534
F++ P + ++ + E T GL +LGAFGLQVP ELG
Sbjct: 113 FEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELG 151
>BC012912-1|AAH12912.1| 655|Homo sapiens acyl-Coenzyme A
dehydrogenase, very long chain protein.
Length = 655
Score = 76.2 bits (179), Expect = 7e-14
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +3
Query: 246 SAASEAQARNGPR--QSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVEKFF 419
S S+A R P +S SF + +F+G+ QVFP+P L+++Q Q L+ELV PV +FF
Sbjct: 54 SHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFF 113
Query: 420 QEVNDPAKNDENSKIE 467
+EVNDPAKND +E
Sbjct: 114 EEVNDPAKNDALEMVE 129
Score = 36.3 bits (80), Expect = 0.068
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 418 FKK*MTPLRMMRIQRLXEGTVAGLWDLGAFGLQVPGELG 534
F++ P + ++ + E T GL +LGAFGLQVP ELG
Sbjct: 113 FEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELG 151
>BC000399-1|AAH00399.1| 655|Homo sapiens acyl-Coenzyme A
dehydrogenase, very long chain protein.
Length = 655
Score = 76.2 bits (179), Expect = 7e-14
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +3
Query: 246 SAASEAQARNGPR--QSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVEKFF 419
S S+A R P +S SF + +F+G+ QVFP+P L+++Q Q L+ELV PV +FF
Sbjct: 54 SHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFF 113
Query: 420 QEVNDPAKNDENSKIE 467
+EVNDPAKND +E
Sbjct: 114 EEVNDPAKNDALEMVE 129
Score = 36.3 bits (80), Expect = 0.068
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 418 FKK*MTPLRMMRIQRLXEGTVAGLWDLGAFGLQVPGELG 534
F++ P + ++ + E T GL +LGAFGLQVP ELG
Sbjct: 113 FEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELG 151
>AK222518-1|BAD96238.1| 655|Homo sapiens acyl-Coenzyme A
dehydrogenase, very long chain precursor variant
protein.
Length = 655
Score = 76.2 bits (179), Expect = 7e-14
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +3
Query: 246 SAASEAQARNGPR--QSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVEKFF 419
S S+A R P +S SF + +F+G+ QVFP+P L+++Q Q L+ELV PV +FF
Sbjct: 54 SHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFF 113
Query: 420 QEVNDPAKNDENSKIE 467
+EVNDPAKND +E
Sbjct: 114 EEVNDPAKNDALEMVE 129
Score = 36.3 bits (80), Expect = 0.068
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 418 FKK*MTPLRMMRIQRLXEGTVAGLWDLGAFGLQVPGELG 534
F++ P + ++ + E T GL +LGAFGLQVP ELG
Sbjct: 113 FEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELG 151
>BC020218-1|AAH20218.1| 633|Homo sapiens acyl-Coenzyme A
dehydrogenase, very long chain protein.
Length = 633
Score = 75.4 bits (177), Expect = 1e-13
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = +3
Query: 252 ASEAQARNGPRQSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVEKFFQEVN 431
A A ++S SF + +F+G+ QVFP+P L+++Q Q L+ELV PV +FF+EVN
Sbjct: 36 ARRPYAGGAAQESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVN 95
Query: 432 DPAKNDENSKIE 467
DPAKND +E
Sbjct: 96 DPAKNDALEMVE 107
Score = 36.3 bits (80), Expect = 0.068
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 418 FKK*MTPLRMMRIQRLXEGTVAGLWDLGAFGLQVPGELG 534
F++ P + ++ + E T GL +LGAFGLQVP ELG
Sbjct: 91 FEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELG 129
>BC013354-1|AAH13354.1| 621|Homo sapiens acyl-Coenzyme A
dehydrogenase family, member 9 protein.
Length = 621
Score = 56.4 bits (130), Expect = 6e-08
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 207 KTTAVVPLCSG-ARSAASEAQARNGPRQSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQM 383
+TTA C G S A+ R P A F LF G+ + +VFPFPE +S D+
Sbjct: 9 RTTAAARACRGLVVSTANRRLLRTSPPVRA-FAKELFLGKIKKKEVFPFPE-VSQDELNE 66
Query: 384 LQELVPPVEKFFQEVNDPAKNDENSKI 464
+ + + PVEKFF E D K D+ KI
Sbjct: 67 INQFLGPVEKFFTEEVDSRKIDQEGKI 93
>BC007970-1|AAH07970.1| 621|Homo sapiens acyl-Coenzyme A
dehydrogenase family, member 9 protein.
Length = 621
Score = 56.4 bits (130), Expect = 6e-08
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 207 KTTAVVPLCSG-ARSAASEAQARNGPRQSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQM 383
+TTA C G S A+ R P A F LF G+ + +VFPFPE +S D+
Sbjct: 9 RTTAAARACRGLVVSTANRRLLRTSPPVRA-FAKELFLGKIKKKEVFPFPE-VSQDELNE 66
Query: 384 LQELVPPVEKFFQEVNDPAKNDENSKI 464
+ + + PVEKFF E D K D+ KI
Sbjct: 67 INQFLGPVEKFFTEEVDSRKIDQEGKI 93
>AK024012-1|BAB14775.1| 621|Homo sapiens protein ( Homo sapiens
cDNA FLJ13950 fis, clone Y79AA1001048, weakly similar to
ACYL-COA DEHYDROGENASE, VERY-LONG-CHAIN SPECIFIC
PRECURSOR (EC ).
Length = 621
Score = 56.4 bits (130), Expect = 6e-08
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 207 KTTAVVPLCSG-ARSAASEAQARNGPRQSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQM 383
+TTA C G S A+ R P A F LF G+ + +VFPFPE +S D+
Sbjct: 9 RTTAAARACRGLVVSTANRRLLRTSPPVRA-FAKELFLGKIKKKEVFPFPE-VSQDELNE 66
Query: 384 LQELVPPVEKFFQEVNDPAKNDENSKI 464
+ + + PVEKFF E D K D+ KI
Sbjct: 67 INQFLGPVEKFFTEEVDSRKIDQEGKI 93
>AF327351-1|AAL56011.1| 621|Homo sapiens very-long-chain acyl-CoA
dehydrogenase VLCAD protein.
Length = 621
Score = 56.4 bits (130), Expect = 6e-08
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 207 KTTAVVPLCSG-ARSAASEAQARNGPRQSASFTLNLFRGRFEPTQVFPFPEPLSDDQRQM 383
+TTA C G S A+ R P A F LF G+ + +VFPFPE +S D+
Sbjct: 9 RTTAAARACRGLVVSTANRRLLRTSPPVRA-FAKELFLGKIKKKEVFPFPE-VSQDELNE 66
Query: 384 LQELVPPVEKFFQEVNDPAKNDENSKI 464
+ + + PVEKFF E D K D+ KI
Sbjct: 67 INQFLGPVEKFFTEEVDSRKIDQEGKI 93
>AB209427-1|BAD92664.1| 274|Homo sapiens acyl-Coenzyme A
dehydrogenase family, member 9 variant protein.
Length = 274
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 336 QVFPFPEPLSDDQRQMLQELVPPVEKFFQEVNDPAKNDENSKI 464
+VFPFPE +S D+ + + + PVEKFF E D K D+ KI
Sbjct: 2 EVFPFPE-VSQDELNEINQFLGPVEKFFTEEVDSRKIDQEGKI 43
>AK095895-1|BAC04644.1| 238|Homo sapiens protein ( Homo sapiens
cDNA FLJ38576 fis, clone HCHON2007482. ).
Length = 238
Score = 30.7 bits (66), Expect = 3.4
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -3
Query: 346 GNTC-VGSNRPRKRFRVKEALCLGPFRACASDAADRAPLQSGTTAVV---LGTRQRPPHR 179
G C G+ RP+ R + A P R + AP Q G T V+ L +RQR P
Sbjct: 149 GRGCSAGAGRPQPRGTRRRAKTCHPAREGREGPREGAPFQPGETRVLAASLSSRQRAPVL 208
Query: 178 TSLAPF 161
T APF
Sbjct: 209 TP-APF 213
>BC119680-1|AAI19681.1| 316|Homo sapiens ZNF101 protein protein.
Length = 316
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 161 ERCQAGPVWRSLPRPQNDCGGSALQRSSICRIRGASSKRTETECLFHSESFPWP 322
+R + G WR PR Q G +++ SS R +++ EC ++F P
Sbjct: 8 KRSECGGEWRETPRKQKQHGKASISPSSGARRTVTPTRKRPYECKVCGKAFNSP 61
>BC011502-1|AAH11502.2| 373|Homo sapiens ZNF101 protein protein.
Length = 373
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 161 ERCQAGPVWRSLPRPQNDCGGSALQRSSICRIRGASSKRTETECLFHSESFPWP 322
+R + G WR PR Q G +++ SS R +++ EC ++F P
Sbjct: 65 KRSECGGEWRETPRKQKQHGKASISPSSGARRTVTPTRKRPYECKVCGKAFNSP 118
>AY149174-1|AAN46749.1| 436|Homo sapiens zinc finger protein 12
protein.
Length = 436
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 161 ERCQAGPVWRSLPRPQNDCGGSALQRSSICRIRGASSKRTETECLFHSESFPWP 322
+R + G WR PR Q G +++ SS R +++ EC ++F P
Sbjct: 128 KRSECGGEWRETPRKQKQHGKASISPSSGARRTVTPTRKRPYECKVCGKAFNSP 181
>AL096747-1|CAB46422.1| 232|Homo sapiens hypothetical protein
protein.
Length = 232
Score = 29.5 bits (63), Expect = 7.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 161 ERCQAGPVWRSLPRPQNDCGGSALQRSSICRIRGASSKRTETECLFHSESFPWP 322
+R + G WR PR Q G +++ SS R +++ EC ++F P
Sbjct: 8 KRSECGGEWRETPRKQKQHGKASISPSSGARRTVTPTRKRPYECKVCGKAFNSP 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,138,821
Number of Sequences: 237096
Number of extensions: 1521231
Number of successful extensions: 4413
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4408
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -