Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12l04f
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    31   0.008
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.2  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   1.6  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    23   2.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   3.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.5  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.6  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.6  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 31.1 bits (67), Expect = 0.008
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +2

Query: 158 TARPHMEVPPTEVHQVEDPPMEVQQAED---PPMEVQQAEDPPM 280
           T  PH EVPP   +  E+PP+  ++  D   P ++V+  E+ P+
Sbjct: 13  TVLPHQEVPPPFGYYHEEPPLFYEERPDFVAPYIKVEADEEAPV 56


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 21/67 (31%), Positives = 25/67 (37%)
 Frame = +2

Query: 44   SQWLQNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVEDPPME 223
            S W      +   +TRP TT+   RP T      T   T  P   V P EV +   P   
Sbjct: 1049 SPWWTTTTTRRTTTTRPTTTSTTTRPTTTNW--PTQGTTIPPPAVVMP-EVDKPSQPCEP 1105

Query: 224  VQQAEDP 244
             Q   DP
Sbjct: 1106 GQYVPDP 1112


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +2

Query: 110 RFRPATEFLLAVTHHMTARPHMEVPPTEVHQ 202
           +F P  E  L   H     PH EV    +HQ
Sbjct: 102 KFNPHHEIKLQHLHQSKFNPHEEVKLQHLHQ 132


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 376 TNFLRNCYCRRRGY 335
           T FL+ CYC R  +
Sbjct: 75  TGFLKECYCCRESF 88


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 375 VVWRKFASRWKLTLRRW 425
           V++ + ASRW L L  W
Sbjct: 107 VLFSQVASRWPLFLNEW 123


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 312 ILIASIWIATSIGGS 268
           I + ++WI TSI G+
Sbjct: 86  IYVGTVWINTSINGT 100


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = +2

Query: 14  DRMQQNRRNLSQWLQNRKHQLLISTRPLTTNPRFRPA 124
           + +  + R +  W QNR+ +         + PR  PA
Sbjct: 123 ENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRSSPA 159


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = +2

Query: 14  DRMQQNRRNLSQWLQNRKHQLLISTRPLTTNPRFRPA 124
           + +  + R +  W QNR+ +         + PR  PA
Sbjct: 114 ENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRSSPA 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.303    0.125    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,086
Number of Sequences: 336
Number of extensions: 2052
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.3 bits)