Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12l04f
(635 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0195 + 23142830-23143714,23144288-23144314,23144657-231448... 36 0.027
10_08_1037 - 22477358-22478752 31 1.0
10_01_0075 - 979335-979954,980136-980405,980949-980989,981563-98... 30 1.8
11_06_0610 - 25449085-25453284 29 2.3
09_06_0295 + 22099791-22100030,22100681-22100797,22100886-22102616 29 4.1
08_01_0260 + 2127396-2127962 29 4.1
03_02_0341 - 7643426-7643973,7644340-7644505 29 4.1
01_06_0482 - 29672720-29673854,29673941-29676267 29 4.1
07_01_0347 - 2509229-2509487,2509682-2509922,2510292-2510511,251... 28 5.4
03_01_0092 - 731069-731434,731569-733080 28 5.4
02_01_0279 - 1860410-1860508,1861536-1861889,1862660-1862805,186... 28 5.4
06_03_0927 + 26015956-26018230,26018323-26018471,26018550-260186... 28 7.1
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 28 7.1
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 28 7.1
04_04_1299 + 32450998-32451134,32451575-32452304,32452856-324530... 28 7.1
04_04_0430 - 25153572-25154060 28 7.1
02_05_0814 - 31970558-31971126,31971242-31971413 28 7.1
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 28 7.1
12_01_0063 - 535364-536085,536226-536439,536989-537981,538238-53... 27 9.4
11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-45... 27 9.4
10_01_0002 - 34139-34234,34337-34345,34806-35048,35931-36003,361... 27 9.4
09_04_0180 + 15367737-15367755,15368874-15369739 27 9.4
08_01_0259 + 2123393-2123555,2123670-2124070 27 9.4
07_03_1546 + 27602598-27602917,27602995-27603052,27603130-276032... 27 9.4
04_04_1153 - 31294014-31294095,31294180-31294261,31294422-312948... 27 9.4
03_01_0371 + 2883418-2883967,2884097-2884176,2886283-2886339,288... 27 9.4
02_05_1210 - 34954006-34955412 27 9.4
>05_05_0195 + 23142830-23143714,23144288-23144314,23144657-23144866,
23144976-23145242,23146290-23146376,23146495-23146553,
23147166-23147768,23148063-23148192,23148570-23149100,
23149636-23149743,23149911-23150456,23150957-23151079,
23151494-23151709
Length = 1263
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +2
Query: 182 PPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPMEV 286
PP E Q+ PP E Q PP E Q ED EV
Sbjct: 1217 PPAETSQLATPPAETSQLATPPAETSQLEDGRTEV 1251
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 173 MEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAED 271
+ PP E Q+ PP E Q ED EVQ +D
Sbjct: 1224 LATPPAETSQLATPPAETSQLEDGRTEVQNLDD 1256
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 176 EVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPMEVA 289
EVPP E PP E Q PP E Q PP E +
Sbjct: 1208 EVPPVEATA---PPAETSQLATPPAETSQLATPPAETS 1242
>10_08_1037 - 22477358-22478752
Length = 464
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 167 PHMEVPPTEVHQVEDPP-MEVQQAEDPPMEVQQAEDPPM 280
PH +PP HQ PP M +Q+ PP+ A PP+
Sbjct: 251 PHRPLPPQ--HQQPKPPSMRLQKIRPPPISTPVARPPPV 287
>10_01_0075 -
979335-979954,980136-980405,980949-980989,981563-981663
Length = 343
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Frame = +2
Query: 119 PATEFLLAVTHHMTARPHMEVPPTEVHQVED---PPM---EVQQAEDPPMEVQQAEDP 274
PAT L + H +P ++ PP+ H E+ PP+ V PP + QQ P
Sbjct: 144 PATHTLRMLQHQPEPQPQLQHPPSPPHPKEECISPPLMEENVPVKPPPPKKRQQGRQP 201
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +2
Query: 107 PRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQA-EDPP 277
P+ P TE+ T + P + PPT PP+ PP A E PP
Sbjct: 531 PQAEPPTEYSPPATPESSPPPEGKSPPTPTASHSPPPVPEGHTPSPPKSGPPAGESPP 588
>09_06_0295 + 22099791-22100030,22100681-22100797,22100886-22102616
Length = 695
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 158 TARPHMEVPPTEVHQVEDPPMEVQQAEDPP--MEVQQAEDPPMEVAIHMEAINIQVD 322
TA PH V ++H+ E P E + P E + +DP ++ A H E I++++D
Sbjct: 596 TALPHPSVA-IKMHK-EKPSEENMSKPNSPNTTEEMKKQDPSLDSATHTEKISLELD 650
>08_01_0260 + 2127396-2127962
Length = 188
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 7 VEGSHAAEPTQPKPMAPKPQTPTL 78
VE + + PT P P+AP P+TPT+
Sbjct: 121 VEAATGSNPT-PSPLAPLPRTPTV 143
>03_02_0341 - 7643426-7643973,7644340-7644505
Length = 237
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 149 HHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIH 295
HH+ P + VPP H PP+ +PP+ V + P+ V H
Sbjct: 165 HHIVLHPPVIVPPKHDHDHSLPPV-----HEPPVTVPDHKPAPVTVPDH 208
>01_06_0482 - 29672720-29673854,29673941-29676267
Length = 1153
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 209 DPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEAINIQVDRQEG 334
D ++V++ E P +E ++ E P + +E IN+ + + EG
Sbjct: 315 DAGLDVRKEEVPTVESEENESPQSKHCTSVEVINVDLAQPEG 356
>07_01_0347 -
2509229-2509487,2509682-2509922,2510292-2510511,
2510943-2511278,2512047-2512103,2512187-2512210
Length = 378
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/54 (22%), Positives = 26/54 (48%)
Frame = +2
Query: 146 THHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEAI 307
+ HM M V +V P+E+ A++PP+ + + ++P + +E +
Sbjct: 53 SRHMNKIFSMSVQQASKSKVAVKPLELDNAKEPPLNLYKPKEPYTATIVSVERL 106
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 182 PPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPP 277
PP HQ PP++VQ PM Q PP
Sbjct: 251 PPQHHHQQTPPPIQVQPHHIMPMTPQPQLQPP 282
>02_01_0279 -
1860410-1860508,1861536-1861889,1862660-1862805,
1862885-1862925,1863010-1863173,1863217-1863281,
1863410-1863670,1863754-1863817,1863946-1864006,
1864112-1864473
Length = 538
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +1
Query: 4 LVEGSHAAEPTQPKPMAP-KPQTPTLDFD 87
L+EGS +PT P P+ P +PQ +D D
Sbjct: 76 LLEGSCDPDPTPPPPLPPLQPQATPMDAD 104
>06_03_0927 +
26015956-26018230,26018323-26018471,26018550-26018618,
26018701-26018853,26018927-26019090,26019207-26019354,
26020348-26020470,26020560-26020647,26020781-26020950
Length = 1112
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 445 NSHGGSNPYAPSTGGSGG 498
NS GG P AP++GG GG
Sbjct: 161 NSDGGPPPPAPTSGGGGG 178
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 134 LLAVTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPP 277
LL HH A PH PP ++PP + P + Q PP
Sbjct: 44 LLYGQHH--ALPHPPPPPPPPQPAKEPPPPTKPKHPKPKQQQHPPPPP 89
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/76 (23%), Positives = 32/76 (42%)
Frame = +2
Query: 101 TNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPM 280
T+ PA E + +V H A H+E PP+ Q P + + + + A P
Sbjct: 2012 THSELHPARESISSVGHEKLAGAHLEAPPSVSFQA--PVQHETRKDYVGVHSEVATTHPE 2069
Query: 281 EVAIHMEAINIQVDRQ 328
+ H ++N +D +
Sbjct: 2070 TITTH-SSVNPVIDHK 2084
>04_04_1299 +
32450998-32451134,32451575-32452304,32452856-32453053,
32453398-32454065,32454555-32454978,32455917-32456009,
32456101-32456295,32456378-32456470,32456718-32456930,
32457015-32457104,32457239-32457400
Length = 1000
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/58 (22%), Positives = 23/58 (39%)
Frame = +2
Query: 38 NLSQWLQNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVED 211
N +WL+ K I TR N ++ +T + HH H + ++ V +
Sbjct: 77 NAQEWLEESKRISSIKTRNNVGNTIYKGSTHLRTGILHHEPLEDHKSSNYSSLYNVRE 134
>04_04_0430 - 25153572-25154060
Length = 162
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +1
Query: 10 EGSHAAEPTQPKPMAPKPQTPTLDFD 87
E AA P P P P+P TP FD
Sbjct: 122 EQEAAAAPPSPPPPPPRPATPPPSFD 147
>02_05_0814 - 31970558-31971126,31971242-31971413
Length = 246
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 13 GSHAAEPTQPKPMAPKPQTPT 75
GS + P+ P P P P TPT
Sbjct: 141 GSTPSSPSSPTPTTPNPSTPT 161
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +2
Query: 182 PPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPMEVA--IHM 298
PP E E P E A PP E QA PP A IHM
Sbjct: 99 PPEEAPAAEPAPSEA--APPPPAEADQAAAPPATDATVIHM 137
>12_01_0063 -
535364-536085,536226-536439,536989-537981,538238-538255,
538601-538860,539950-540073,540978-541310,541447-541531,
541683-541768,541843-541941,542041-542180,542717-543043,
543163-543774,543887-543971,543972-544067,544147-544500,
544536-544559,544597-544707,544811-544894,545468-545546,
546122-546279,546412-546528,546622-546780,546857-546939,
547525-547627,549184-549495
Length = 1925
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 158 TARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAE---DPPMEVAIHMEAINIQVDRQ 328
+A P +P + + D + V+ DP +V E PP +VA+ + + + R
Sbjct: 18 SAAPSAALPNHHTNHLVDDHLPVENGPDPRRDVPDEEPPPPPPPQVALLPQVVVLCEQRH 77
Query: 329 EG 334
EG
Sbjct: 78 EG 79
>11_01_0061 -
456521-457389,457534-457659,458377-459307,459564-459581,
459924-460183,461834-461918,462587-462919,463053-463137,
463289-463374,463455-463556,463656-463795,464332-464658,
464778-465389,465502-465586,465587-465682,465762-466115,
466212-466322,466426-466509,467086-467164,467742-467899,
468034-468150,468240-468398,468475-468557,469098-469200,
470784-471080
Length = 1899
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 158 TARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAE---DPPMEVAIHMEAINIQVDRQ 328
+A P +P + + D + V+ DP +V E PP +VA+ + + + R
Sbjct: 13 SAAPSAALPNHHTNHLVDDHLPVENGPDPRRDVPDEEPPPPPPPQVALLPQVVVLCEQRH 72
Query: 329 EG 334
EG
Sbjct: 73 EG 74
>10_01_0002 -
34139-34234,34337-34345,34806-35048,35931-36003,
36184-36265,36398-36580,36663-36702,36814-36886,
37022-37290
Length = 355
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 179 VPPTEVHQVEDP-PMEVQQAEDPPMEVQQAEDP 274
+P + Q P P VQQ E PP +QQ++ P
Sbjct: 317 IPSKRLTQQPPPEPEVVQQGETPPKPIQQSQRP 349
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 191 EVHQVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEA 304
E+ VED +E+ AEDP +E DP EV +EA
Sbjct: 35 ELEPVEDDVLEL--AEDPALEPLPDLDPEPEVEAELEA 70
>08_01_0259 + 2123393-2123555,2123670-2124070
Length = 187
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 7 VEGSHAAEPTQPKPMAPKPQTPT 75
VE + + P P PM P+P+TPT
Sbjct: 120 VEAATGSNPA-PSPMTPRPRTPT 141
>07_03_1546 + 27602598-27602917,27602995-27603052,27603130-27603252,
27603896-27603992,27604095-27604131,27604244-27604349,
27604547-27604604,27604705-27604802,27604911-27605030,
27605622-27605667,27606336-27606522,27606747-27607263,
27607361-27607453,27608101-27608286,27608364-27608574,
27609263-27609387,27609518-27609664,27610114-27610236,
27610445-27610799,27611076-27611305,27611785-27611877
Length = 1109
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +2
Query: 167 PHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDP 274
P+ VPPT HQ PP + Q P V A P
Sbjct: 897 PYQGVPPTTYHQPR-PPTQFQTVPTAPPAVSSATVP 931
>04_04_1153 -
31294014-31294095,31294180-31294261,31294422-31294857,
31295124-31295312,31296190-31296360
Length = 319
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 71 QLLISTRPLTTNP-RFRPATEFLLAVTHHMTARPHMEVPPT 190
+L++ +P T +PATE +L H T P +EVPP+
Sbjct: 173 ELIVENKPATELILEKKPATELILE-KKHATEPPKVEVPPS 212
>03_01_0371 +
2883418-2883967,2884097-2884176,2886283-2886339,
2887152-2887207,2888006-2888079,2889511-2889798,
2890043-2890120,2890359-2890882,2891315-2891438,
2891619-2891767,2891983-2892137,2892477-2892682,
2892768-2892901,2892983-2893284,2893514-2893617,
2893858-2893928
Length = 983
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 25 AEPTQPKPMAPKPQTP 72
AEPT P P PKP +P
Sbjct: 60 AEPTAPAPSKPKPSSP 75
>02_05_1210 - 34954006-34955412
Length = 468
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 443 VILTADPTHTRLALVDQAARAHSTTYLIH 529
V++ ADPT+ L D+ A+A + L+H
Sbjct: 108 VLILADPTYGACCLADRPAKALAADVLVH 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.303 0.125 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,160,852
Number of Sequences: 37544
Number of extensions: 283161
Number of successful extensions: 817
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
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