Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12l04f
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           27   0.50 
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   3.5  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   4.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   4.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.6  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           23   8.1  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = +1

Query: 445  NSHGGSNPYAPS-TGGSGGKSPLD 513
            N  G S P  P   GG GGKSP D
Sbjct: 1408 NGSGRSKPPGPEGVGGGGGKSPSD 1431


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = +2

Query: 149 HHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPP 247
           HH     H+ VP ++ HQ+    +    A   P
Sbjct: 355 HHAALHAHLGVPTSQHHQLNQAAVAAAAASQVP 387


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 31  PTQPKPMAPKPQTPTLD 81
           P+ P+P+ P+PQ  +L+
Sbjct: 204 PSHPQPIVPQPQRASLE 220


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 31  PTQPKPMAPKPQTPTLD 81
           P+ P+P+ P+PQ  +L+
Sbjct: 204 PSHPQPIVPQPQRASLE 220


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +2

Query: 146 THHMTARPHMEVPPTEVHQVEDPPMEVQQAEDP 244
           ++H+   P+  +PP     +  PP + QQ + P
Sbjct: 103 SNHLLGGPNHHLPPGASPGLVPPPQQQQQQQAP 135


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 376 TNFLRNCYCRRRGY 335
           T FL+ CYC R  +
Sbjct: 134 TGFLKECYCCRESF 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.303    0.125    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,308
Number of Sequences: 2352
Number of extensions: 8833
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)