Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12l04f
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein. 40 0.010
U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein. 40 0.010
BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing transcrip... 40 0.010
AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing transcrip... 40 0.010
D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein. 33 1.1
AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coacti... 33 1.1
AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coacti... 33 1.1
AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactiv... 33 1.1
AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified transc... 33 1.1
AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone recepto... 33 1.1
AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coacti... 33 1.1
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 32 2.0
Z74477-2|CAI41996.1| 352|Homo sapiens testis expressed 13A prot... 31 3.4
BC126902-1|AAI26903.1| 186|Homo sapiens VCX3A protein protein. 31 3.4
BC098143-1|AAH98143.1| 214|Homo sapiens VCX3B protein protein. 31 3.4
AF167081-1|AAG41767.1| 206|Homo sapiens variably charged X-B1 p... 31 3.4
AF159129-1|AAF28174.1| 206|Homo sapiens variable charge protein... 31 3.4
BC026181-1|AAH26181.1| 485|Homo sapiens ZNF639 protein protein. 30 6.0
BC020500-1|AAH20500.1| 485|Homo sapiens zinc finger protein 639... 30 6.0
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 30 6.0
AF003924-1|AAF21240.1| 485|Homo sapiens ANC_2H01 protein. 30 6.0
AB097862-1|BAC77610.1| 485|Homo sapiens Kruppel-like zinc finge... 30 6.0
>U22680-1|AAA98503.1| 1088|Homo sapiens X2 box repressor protein.
Length = 1088
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +2
Query: 143 VTHHMTARPHMEVPPTEVHQVEDPPME-----VQQAEDPPMEVQQAEDPPMEVAIHMEAI 307
V HM P ME TEV Q+ PME V Q E PM+V Q E ME++ ME +
Sbjct: 680 VLAHMELPPPMETAQTEVAQMGPAPMEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVV 739
Score = 34.7 bits (76), Expect = 0.28
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +2
Query: 173 MEVPPTEVHQVEDPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 307
ME EV QVE PM+V Q E PPMEV Q E +E++ ME +
Sbjct: 705 MEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVV 755
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +2
Query: 173 MEVPPTEVHQVE-DPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 307
M+V E Q+E PPMEV Q E PPMEV Q E +E++ +E +
Sbjct: 720 MQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVV 771
>U22314-1|AAB17211.1| 1097|Homo sapiens REST protein protein.
Length = 1097
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +2
Query: 143 VTHHMTARPHMEVPPTEVHQVEDPPME-----VQQAEDPPMEVQQAEDPPMEVAIHMEAI 307
V HM P ME TEV Q+ PME V Q E PM+V Q E ME++ ME +
Sbjct: 681 VLAHMELPPPMETAQTEVAQMGPAPMEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVV 740
Score = 34.7 bits (76), Expect = 0.28
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +2
Query: 173 MEVPPTEVHQVEDPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 307
ME EV QVE PM+V Q E PPMEV Q E +E++ ME +
Sbjct: 706 MEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVV 756
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +2
Query: 173 MEVPPTEVHQVE-DPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 307
M+V E Q+E PPMEV Q E PPMEV Q E +E++ +E +
Sbjct: 721 MQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVV 772
>BC132859-1|AAI32860.1| 1097|Homo sapiens RE1-silencing
transcription factor protein.
Length = 1097
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +2
Query: 143 VTHHMTARPHMEVPPTEVHQVEDPPME-----VQQAEDPPMEVQQAEDPPMEVAIHMEAI 307
V HM P ME TEV Q+ PME V Q E PM+V Q E ME++ ME +
Sbjct: 681 VLAHMELPPPMETAQTEVAQMGPAPMEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVV 740
Score = 34.7 bits (76), Expect = 0.28
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +2
Query: 173 MEVPPTEVHQVEDPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 307
ME EV QVE PM+V Q E PPMEV Q E +E++ ME +
Sbjct: 706 MEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVV 756
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +2
Query: 173 MEVPPTEVHQVE-DPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 307
M+V E Q+E PPMEV Q E PPMEV Q E +E++ +E +
Sbjct: 721 MQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVV 772
>AB209750-1|BAD92987.1| 1126|Homo sapiens RE1-silencing
transcription factor variant protein.
Length = 1126
Score = 39.5 bits (88), Expect = 0.010
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +2
Query: 143 VTHHMTARPHMEVPPTEVHQVEDPPME-----VQQAEDPPMEVQQAEDPPMEVAIHMEAI 307
V HM P ME TEV Q+ PME V Q E PM+V Q E ME++ ME +
Sbjct: 710 VLAHMELPPPMETAQTEVAQMGPAPMEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVV 769
Score = 34.7 bits (76), Expect = 0.28
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +2
Query: 173 MEVPPTEVHQVEDPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 307
ME EV QVE PM+V Q E PPMEV Q E +E++ ME +
Sbjct: 735 MEPAQMEVAQVESAPMQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVV 785
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +2
Query: 173 MEVPPTEVHQVE-DPPMEVQQAE------DPPMEVQQAEDPPMEVAIHMEAI 307
M+V E Q+E PPMEV Q E PPMEV Q E +E++ +E +
Sbjct: 750 MQVVQKEPVQMELSPPMEVVQKEPVQIELSPPMEVVQKEPVKIELSPPIEVV 801
>D80003-1|BAA11498.2| 2079|Homo sapiens KIAA0181 protein.
Length = 2079
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 164 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 997 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 1036
>AL109824-4|CAB92721.2| 2063|Homo sapiens nuclear receptor coactivator
6 protein.
Length = 2063
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 164 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 981 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 1020
>AF245115-1|AAF78480.1| 2063|Homo sapiens nuclear receptor coactivator
protein.
Length = 2063
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 164 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 981 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 1020
>AF208227-1|AAF16403.1| 2001|Homo sapiens transcriptional coactivator
AIB3 protein.
Length = 2001
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 164 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 919 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 958
>AF177388-1|AAF13595.1| 2063|Homo sapiens cancer-amplified
transcriptional coactivator ASC-2 protein.
Length = 2063
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 164 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 981 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 1020
>AF171667-1|AAF71829.1| 2063|Homo sapiens thyroid hormone receptor
binding protein protein.
Length = 2063
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 164 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 981 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 1020
>AF128458-1|AAF37003.1| 2063|Homo sapiens nuclear receptor coactivator
RAP250 protein.
Length = 2063
Score = 32.7 bits (71), Expect = 1.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 164 RPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
RP ++PP + V PP QQ P + QQ PP +
Sbjct: 981 RPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQ 1020
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 182 PPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
P E DPP E Q +PP E Q DPP E
Sbjct: 17 PQPEPQPPLDPPQEPQPPLEPPQEPQPPLDPPQE 50
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 182 PPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPP 277
PP + Q PP+E Q PP++ Q PP
Sbjct: 23 PPLDPPQEPQPPLEPPQEPQPPLDPPQEHSPP 54
Score = 31.1 bits (67), Expect = 3.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 167 PHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPP 277
P PP E Q PP++ Q PP + ++ PP
Sbjct: 28 PQEPQPPLEPPQEPQPPLDPPQEHSPPCSLHRSHSPP 64
>Z74477-2|CAI41996.1| 352|Homo sapiens testis expressed 13A
protein.
Length = 352
Score = 31.1 bits (67), Expect = 3.4
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 174 WRFPLRRFIRWRIPLWRFNRRRIPLWRFN----RRRIPLWR*QSIWRQS 308
WR L + W +PLWR +P WR + R +P WR Q WR+S
Sbjct: 201 WRLWLPLWRPW-LPLWRLG---LPPWRPSSPTWRPGLPPWRPQRSWRES 245
>BC126902-1|AAI26903.1| 186|Homo sapiens VCX3A protein protein.
Length = 186
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 143 VTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
V ++ +E P ++ QVE+P + + E+P + Q E+PP +
Sbjct: 130 VEEPLSQESEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEEPPSQ 176
>BC098143-1|AAH98143.1| 214|Homo sapiens VCX3B protein protein.
Length = 214
Score = 31.1 bits (67), Expect = 3.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 167 PHMEVPPTE-VHQVEDPPMEVQQAEDPPMEVQQAEDP 274
P E+PP E V +VE+P + Q E+P + + E+P
Sbjct: 85 PQHELPPEEPVSEVEEPLSQESQVEEPLSQESEMEEP 121
Score = 29.9 bits (64), Expect = 7.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 143 VTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDP 274
V ++ ME P ++ QVE+P + + E+P + Q E+P
Sbjct: 108 VEEPLSQESEMEEPLSQESQVEEPLSQESEVEEPLSQESQVEEP 151
>AF167081-1|AAG41767.1| 206|Homo sapiens variably charged X-B1
protein.
Length = 206
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 143 VTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
V ++ +E P ++ QVE+P + + E+P + Q E+PP +
Sbjct: 150 VEEPLSQESEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEEPPSQ 196
>AF159129-1|AAF28174.1| 206|Homo sapiens variable charge protein on
X with ten repeats protein.
Length = 206
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 143 VTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
V ++ +E P ++ QVE+P + + E+P + Q E+PP +
Sbjct: 150 VEEPLSQESEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEEPPSQ 196
>BC026181-1|AAH26181.1| 485|Homo sapiens ZNF639 protein protein.
Length = 485
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 209 DPPMEVQQA--EDPPMEVQQAEDPPMEVAIHMEAINIQVDRQEGXXXXXXXXXXEE 370
D P V Q E+ P+EV AED P+ V +H + + ++ + EE
Sbjct: 115 DSPESVNQQTQEESPIEVHTAEDVPIAVEVHAISEDYDIETENNSSESLQDQTDEE 170
>BC020500-1|AAH20500.1| 485|Homo sapiens zinc finger protein 639
protein.
Length = 485
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 209 DPPMEVQQA--EDPPMEVQQAEDPPMEVAIHMEAINIQVDRQEGXXXXXXXXXXEE 370
D P V Q E+ P+EV AED P+ V +H + + ++ + EE
Sbjct: 115 DSPESVNQQTQEESPIEVHTAEDVPIAVEVHAISEDYDIETENNSSESLQDQTDEE 170
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/52 (28%), Positives = 21/52 (40%)
Frame = +2
Query: 149 HHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEA 304
HH M+ P V Q PP + PP + QQ PP ++ +A
Sbjct: 738 HHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQA 789
>AF003924-1|AAF21240.1| 485|Homo sapiens ANC_2H01 protein.
Length = 485
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 209 DPPMEVQQA--EDPPMEVQQAEDPPMEVAIHMEAINIQVDRQEGXXXXXXXXXXEE 370
D P V Q E+ P+EV AED P+ V +H + + ++ + EE
Sbjct: 115 DSPESVNQQTQEESPIEVHTAEDVPIAVEVHAISEDYDIETENNSSESLQDQTDEE 170
>AB097862-1|BAC77610.1| 485|Homo sapiens Kruppel-like zinc finger
protein protein.
Length = 485
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 209 DPPMEVQQA--EDPPMEVQQAEDPPMEVAIHMEAINIQVDRQEGXXXXXXXXXXEE 370
D P V Q E+ P+EV AED P+ V +H + + ++ + EE
Sbjct: 115 DSPESVNQQTQEESPIEVHTAEDVPIAVEVHAISEDYDIETENNSSESLQDQTDEE 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.303 0.125 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,848,630
Number of Sequences: 237096
Number of extensions: 1442126
Number of successful extensions: 4791
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4701
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
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