Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12l04f
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 34 0.098
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 2.8
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 29 2.8
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 2.8
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 2.8
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 2.8
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 2.8
Z54236-10|CAA90986.1| 407|Caenorhabditis elegans Hypothetical p... 28 4.9
Z54235-12|CAA90977.1| 407|Caenorhabditis elegans Hypothetical p... 28 4.9
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 4.9
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 28 6.4
AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical ... 28 6.4
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 6.4
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 27 8.5
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 27 8.5
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 27 8.5
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 27 8.5
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 27 8.5
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 27 8.5
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 33.9 bits (74), Expect = 0.098
Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +2
Query: 92 PLTTNPR-FRPATEFLLAVTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAE 268
P T PR RP TE + V T P E P TEV E P E + P EV
Sbjct: 581 PKTEAPRTVRPKTEAPMTVPPR-TEPPMTEAPRTEVPMTEPPKTEPPRTAPPRTEVSMTL 639
Query: 269 DPPMEVAIHMEAINIQV 319
PP V + EA +V
Sbjct: 640 -PPETVPPNTEAPRTEV 655
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = +2
Query: 92 PLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAED 271
P T PR P T RP E P T + E P E + E P E + E
Sbjct: 566 PRTEAPRTEPPRTEPPKTEAPRTVRPKTEAPMTVPPRTEPPMTEAPRTEVPMTEPPKTEP 625
Query: 272 P 274
P
Sbjct: 626 P 626
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/65 (30%), Positives = 24/65 (36%)
Frame = +2
Query: 92 PLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAED 271
P T PR P + T P+ E P TEV P E + E P + E
Sbjct: 621 PKTEPPRTAPPRTEVSMTLPPETVPPNTEAPRTEVPMTVPPRTEPPKTEAPRTVPPKTEA 680
Query: 272 PPMEV 286
P EV
Sbjct: 681 PMTEV 685
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +2
Query: 116 RPATEFLLAVT-HHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
+P T + T T P E P TE E P +E + E P E E P E
Sbjct: 355 KPTTTTVTTTTVPPKTDPPRTEPPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTE 411
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +2
Query: 92 PLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAED 271
P+T PR P T P E P TEV EV E P E +
Sbjct: 656 PMTVPPRTEPP-----KTEAPRTVPPKTEAPMTEVPMTGPSRTEVPMTEPPKTEQPRTAP 710
Query: 272 PPMEVAI 292
P EV++
Sbjct: 711 PRTEVSM 717
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 167 PHMEVPPTEVHQVEDPPME--VQQAEDPPMEVQQAEDP 274
P V P+E HQ PP V +EDP V+ +EDP
Sbjct: 133 PQPSVEPSEDHQPSGPPSPGPVDPSEDPQPSVEPSEDP 170
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 30.7 bits (66), Expect = 0.91
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = +2
Query: 17 RMQQNRRNLSQWLQNRKHQLLISTRP-LTTNPRFRPATEFLLAVTHHMTARPHMEVPPTE 193
+ Q++ N+S+ Q + STR ++ P RP + P P
Sbjct: 147 KKQKSNENVSEMSQRSAPRTAASTRTAISAPPPPRPPPQEPPKPVEQAAPPPPPAPMPVP 206
Query: 194 VHQVEDP-PMEVQQAEDPPMEVQQAEDPPME 283
V + +P P V+Q PP VQ P+E
Sbjct: 207 VEKAPEPVPAPVEQIAPPPAPVQDPAPAPVE 237
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 188 TEVHQVEDPPMEVQQAEDPPMEVQQAE---DPPMEVAIHMEAINIQVDRQEG 334
T E+P E + DPP+ V A+ P E H E++++ R +G
Sbjct: 3274 TTTTTTEEPTEEPAEMRDPPVTVTNAKRESSTPFEFPDHFESVDLSPARPDG 3325
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 188 TEVHQVEDPPMEVQQAEDPPMEVQQAE---DPPMEVAIHMEAINIQVDRQEG 334
T E+P E + DPP+ V A+ P E H E++++ R +G
Sbjct: 1088 TTTTTTEEPTEEPAEMRDPPVTVTNAKRESSTPFEFPDHFESVDLSPARPDG 1139
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 200 QVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEAINIQVDRQE 331
+ DPP +A+DPP + PP + + +EA ++ Q+
Sbjct: 927 EASDPPSTSTEAQDPPKPSSSSAPPPPKKKLGLEAAISKIRGQQ 970
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 200 QVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEAINIQVDRQE 331
+ DPP +A+DPP + PP + + +EA ++ Q+
Sbjct: 927 EASDPPSTSTEAQDPPKPSSSSAPPPPKKKLGLEAAISKIRGQQ 970
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 188 TEVHQVEDPPMEVQQAEDPPMEVQQAE---DPPMEVAIHMEAINIQVDRQEG 334
T E+P E + DPP+ V A+ P E H E++++ R +G
Sbjct: 3274 TTTTTTEEPTEEPAEMRDPPVTVTNAKRESSTPFEFPDHFESVDLSPARPDG 3325
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 188 TEVHQVEDPPMEVQQAEDPPMEVQQAE---DPPMEVAIHMEAINIQVDRQEG 334
T E+P E + DPP+ V A+ P E H E++++ R +G
Sbjct: 3274 TTTTTTEEPTEEPAEMRDPPVTVTNAKRESSTPFEFPDHFESVDLSPARPDG 3325
>Z54236-10|CAA90986.1| 407|Caenorhabditis elegans Hypothetical
protein C09G9.6 protein.
Length = 407
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +2
Query: 11 KDRMQQ----NRRNLSQWLQNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHME 178
+D+M+Q N R + L +H L + RP T + PA + L T T P E
Sbjct: 206 RDQMEQHIMTNGRIAAPPLSAIQHPLEMFARPSTPD---EPAAKLPLGPTPVSTRGPRYE 262
Query: 179 VPPTEVHQVE 208
+P E+H E
Sbjct: 263 LPTKELHDAE 272
>Z54235-12|CAA90977.1| 407|Caenorhabditis elegans Hypothetical
protein C09G9.6 protein.
Length = 407
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +2
Query: 11 KDRMQQ----NRRNLSQWLQNRKHQLLISTRPLTTNPRFRPATEFLLAVTHHMTARPHME 178
+D+M+Q N R + L +H L + RP T + PA + L T T P E
Sbjct: 206 RDQMEQHIMTNGRIAAPPLSAIQHPLEMFARPSTPD---EPAAKLPLGPTPVSTRGPRYE 262
Query: 179 VPPTEVHQVE 208
+P E+H E
Sbjct: 263 LPTKELHDAE 272
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 182 PPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPME 283
PP + Q PP + QQ PP ++QQ PP++
Sbjct: 617 PPPQQSQQPIPPQQQQQPPAPPQQLQQ---PPVQ 647
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +2
Query: 149 HHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHME 301
H M M+ P + D M +QQ + PM Q ++ P + +H++
Sbjct: 854 HQMQQNRSMQQGPHNPQNIPDQMMNMQQMQQDPMSQQPLQESP-QPNLHLQ 903
>AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical
protein Y56A3A.4 protein.
Length = 342
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 173 MEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPM 280
M+V + HQ P ++QQ P + QQA P M
Sbjct: 183 MQVQHQQQHQQPPPSQQIQQPPIPQPQQQQAPPPQM 218
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = +2
Query: 167 PHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEAINIQVDRQ 328
P+ +P PP++ P + QQ + PP +A H + V +Q
Sbjct: 232 PNATIPSFPTSNAASPPVQEFAPPPPQQQQQQFQAPPPPMASHSSISSTPVQQQ 285
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +1
Query: 442 SNSHGGSNPYAP--STGGSGGKS 504
SN+ GG+NP+AP STG S S
Sbjct: 1218 SNTSGGNNPFAPKTSTGTSASSS 1240
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 119 PATEFLLAVTHHMTARPHMEVPPTEVHQVEDPPMEVQQ--AEDPPMEVQQAEDPPMEVAI 292
P T+F + H+ P+ P + HQ PP +Q PP + + DP + + +
Sbjct: 246 PLTQFFQPIPQHLIPPPNPFFP--QQHQTWTPPTLLQPNPIPPPPQRNESSFDPYIPIGV 303
Query: 293 HMEAINIQVDRQ 328
Q + Q
Sbjct: 304 QQPPYQFQQNFQ 315
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 164 RPHMEVPPTEVHQVEDPPMEVQQAEDP-PMEVQQAEDPPMEVAIHMEAINIQ 316
+P E P E E+ P E AE+P E AE+ +E + EA ++
Sbjct: 164 KPQEEAPAEEPAPAEEAPQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAPVE 215
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 164 RPHMEVPPTEVHQVEDPPMEVQQAEDP-PMEVQQAEDPPMEVAIHMEAINIQ 316
+P E P E E+ P E AE+P E AE+ +E + EA ++
Sbjct: 114 KPQEEAPAEEPAPAEEAPQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAPVE 165
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 164 RPHMEVPPTEVHQVEDPPMEVQQAEDP-PMEVQQAEDPPMEVAIHMEAINIQ 316
+P E P E E+ P E AE+P E AE+ +E + EA ++
Sbjct: 164 KPQEEAPAEEPAPAEEAPQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAPVE 215
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 164 RPHMEVPPTEVHQVEDPPMEVQQAEDP-PMEVQQAEDPPMEVAIHMEAINIQ 316
+P E P E E+ P E AE+P E AE+ +E + EA ++
Sbjct: 164 KPQEEAPAEEPAPAEEAPQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAPVE 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.303 0.125 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,939,383
Number of Sequences: 27780
Number of extensions: 204207
Number of successful extensions: 577
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
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