Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12l02r
(745 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 33 0.82
BC107478-1|AAI07479.1| 416|Homo sapiens C6orf205 protein protein. 31 4.4
BC105737-1|AAI05738.1| 566|Homo sapiens chromosome 6 open readi... 31 5.8
BC105735-1|AAI05736.1| 566|Homo sapiens chromosome 6 open readi... 31 5.8
AL669830-8|CAI18008.1| 566|Homo sapiens chromosome 6 open readi... 31 5.8
AL663093-1|CAI17705.1| 566|Homo sapiens chromosome 6 open readi... 31 5.8
AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four ... 31 5.8
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 33.5 bits (73), Expect = 0.82
Identities = 43/171 (25%), Positives = 67/171 (39%)
Frame = -3
Query: 731 PTSLTTFWRSSFTIASSSPITTVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPI 552
PT T+ W+ S T + TT + ++ Y S+ + T TT T S P
Sbjct: 2240 PTQSTSSWQKSRTTTLVTTSTTSTPQTSTTYAHTTSTTSAPTARTTSAPTTSTT--SVPT 2297
Query: 551 NFGSRAPRTSSGIVSQLSSDLSSPKTRLSLCTSATVSL*R*AMMFKATMADLPTATARTR 372
P+T+ V S+ ++ + +S T++T S+ T + T RT
Sbjct: 2298 TSTISGPKTTPSPVPTTSTTSAATTSTISAPTTSTTSVPGTTPSPVLTTSTTSAPTTRTT 2357
Query: 371 QARESAGS*SLCGXXXXXXXXXXTLNVTNTWYW*SALTGTATIWPSESTAS 219
A AG+ S G T++ T SA T + T P+ ST S
Sbjct: 2358 SA-SPAGTTSGPGNTPSPVPTTSTISAPTTSIT-SAPTTSTTSAPTSSTTS 2406
>BC107478-1|AAI07479.1| 416|Homo sapiens C6orf205 protein protein.
Length = 416
Score = 31.1 bits (67), Expect = 4.4
Identities = 46/176 (26%), Positives = 71/176 (40%)
Frame = -3
Query: 725 SLTTFWRSSFTIASSSPITTVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPINF 546
S TT +S T +S TT + + S + TN +T + ST N
Sbjct: 155 SSTTSSEAS-TATNSESSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNS 213
Query: 545 GSRAPRTSSGIVSQLSSDLSSPKTRLSLCTSATVSL*R*AMMFKATMADLPTATARTRQA 366
GS TSSG + +S+ S+ + S T++ S + AT ++ T ++ A
Sbjct: 214 GSST--TSSGTSTATNSESSTVSSGASTATTSESSTTS-SGASTATNSESSTVSSGASTA 270
Query: 365 RESAGS*SLCGXXXXXXXXXXTLNVTNTWYW*SALTGTATIWPSESTASIVSEPSG 198
S S + G +VT+ +ALTG T S STA ++P G
Sbjct: 271 TNSESSTTSSGANTATNSGS---SVTSAGSGTAALTGMHTTSHSASTAVSEAKPGG 323
>BC105737-1|AAI05738.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 30.7 bits (66), Expect = 5.8
Identities = 42/166 (25%), Positives = 66/166 (39%)
Frame = -3
Query: 695 TIASSSPITTVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPINFGSRAPRTSSG 516
T +S TT + + S + TN +T + ST N GS TSSG
Sbjct: 314 TATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSST--TSSG 371
Query: 515 IVSQLSSDLSSPKTRLSLCTSATVSL*R*AMMFKATMADLPTATARTRQARESAGS*SLC 336
+ +S+ S+ + S T++ S + AT ++ T ++ A S S +
Sbjct: 372 TSTATNSESSTVSSGASTATTSESSTTS-SGASTATNSESSTVSSGASTATNSESSTTSS 430
Query: 335 GXXXXXXXXXXTLNVTNTWYW*SALTGTATIWPSESTASIVSEPSG 198
G +VT+ +ALTG T S STA ++P G
Sbjct: 431 GANTATNSGS---SVTSAGSGTAALTGMHTTSHSASTAVSEAKPGG 473
>BC105735-1|AAI05736.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 30.7 bits (66), Expect = 5.8
Identities = 42/166 (25%), Positives = 66/166 (39%)
Frame = -3
Query: 695 TIASSSPITTVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPINFGSRAPRTSSG 516
T +S TT + + S + TN +T + ST N GS TSSG
Sbjct: 314 TATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSST--TSSG 371
Query: 515 IVSQLSSDLSSPKTRLSLCTSATVSL*R*AMMFKATMADLPTATARTRQARESAGS*SLC 336
+ +S+ S+ + S T++ S + AT ++ T ++ A S S +
Sbjct: 372 TSTATNSESSTVSSGASTATTSESSTTS-SGASTATNSESSTVSSGASTATNSESSTTSS 430
Query: 335 GXXXXXXXXXXTLNVTNTWYW*SALTGTATIWPSESTASIVSEPSG 198
G +VT+ +ALTG T S STA ++P G
Sbjct: 431 GANTATNSGS---SVTSAGSGTAALTGMHTTSHSASTAVSEAKPGG 473
>AL669830-8|CAI18008.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 30.7 bits (66), Expect = 5.8
Identities = 42/166 (25%), Positives = 66/166 (39%)
Frame = -3
Query: 695 TIASSSPITTVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPINFGSRAPRTSSG 516
T +S TT + + S + TN +T + ST N GS TSSG
Sbjct: 314 TATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSST--TSSG 371
Query: 515 IVSQLSSDLSSPKTRLSLCTSATVSL*R*AMMFKATMADLPTATARTRQARESAGS*SLC 336
+ +S+ S+ + S T++ S + AT ++ T ++ A S S +
Sbjct: 372 TSTATNSESSTVSSGASTATTSESSTTS-SGASTATNSESSTVSSGASTATNSESSTTSS 430
Query: 335 GXXXXXXXXXXTLNVTNTWYW*SALTGTATIWPSESTASIVSEPSG 198
G +VT+ +ALTG T S STA ++P G
Sbjct: 431 GANTATNSGS---SVTSAGSGTAALTGMHTTSHSASTAVSEAKPGG 473
>AL663093-1|CAI17705.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 30.7 bits (66), Expect = 5.8
Identities = 42/166 (25%), Positives = 66/166 (39%)
Frame = -3
Query: 695 TIASSSPITTVRLKRASIYTRRRRAKSSQMS*TN*YETTR*TAWSTPINFGSRAPRTSSG 516
T +S TT + + S + TN +T + ST N GS TSSG
Sbjct: 314 TATNSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSST--TSSG 371
Query: 515 IVSQLSSDLSSPKTRLSLCTSATVSL*R*AMMFKATMADLPTATARTRQARESAGS*SLC 336
+ +S+ S+ + S T++ S + AT ++ T ++ A S S +
Sbjct: 372 TSTATNSESSTVSSGASTATTSESSTTS-SGASTATNSESSTVSSGASTATNSESSTTSS 430
Query: 335 GXXXXXXXXXXTLNVTNTWYW*SALTGTATIWPSESTASIVSEPSG 198
G +VT+ +ALTG T S STA ++P G
Sbjct: 431 GANTATNSGS---SVTSAGSGTAALTGMHTTSHSASTAVSEAKPGG 473
>AB158503-1|BAD69710.1| 151|Homo sapiens splice variant of four and
a half LIM domain protein 2 protein.
Length = 151
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 566 WSTPINFGSRAPRTSSGIVSQLSSDLSSPKT-RLSLC 459
WST G R +++ SQL +SSPKT R+S+C
Sbjct: 57 WSTRAAAGMRPASSATAASSQLEPRVSSPKTIRISVC 93
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,999,694
Number of Sequences: 237096
Number of extensions: 1880511
Number of successful extensions: 4646
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4644
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8903143626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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