Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12k24f
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 66 1e-11
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 66 1e-11
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 42 4e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 42 4e-04
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 40 0.001
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 34 0.086
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 31 0.46
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.80
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 30 1.4
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 28 4.3
AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical ... 28 4.3
Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 27 9.9
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 27 9.9
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 27 9.9
AF067944-2|AAY86264.1| 97|Caenorhabditis elegans Hypothetical ... 27 9.9
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 66.5 bits (155), Expect = 1e-11
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 354 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRCL 530
PC C G+ C + + G+ C CI CP + D VC N N+T+ S C++YR+RCL
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCL 111
Query: 531 CLDNSDQC 554
C S +C
Sbjct: 112 CKRKSKEC 119
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 66.5 bits (155), Expect = 1e-11
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 354 PCLKVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRCL 530
PC C G+ C + + G+ C CI CP + D VC N N+T+ S C++YR+RCL
Sbjct: 52 PCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCL 111
Query: 531 CLDNSDQC 554
C S +C
Sbjct: 112 CKRKSKEC 119
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 363 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRC 527
K C C + E+ A C C DCP YE + + VC T+ S+C + + C
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 570
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 354 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 527
PC K+ C C + A C C C D R VC ET+ ++CE+ ++ C
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 423
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 372 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDN 542
C +VC + D C+ CP TD + VC + +T+ ++C + C+ N
Sbjct: 448 CKKPQVCVVV---DGKPKCV--CPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKN 499
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +3
Query: 354 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 527
PC C G+ C++ C C + C T + VC +T+ ++C + C
Sbjct: 295 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAAC 349
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 363 KVHCSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRC 527
K C C + E+ A C C DCP YE + + VC T+ S+C + + C
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 578
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 354 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 527
PC K+ C C + A C C C D R VC ET+ ++CE+ ++ C
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 431
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 372 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDN 542
C +VC + D C+ CP TD + VC + +T+ ++C + C+ N
Sbjct: 456 CKKPQVCVVV---DGKPKCV--CPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKN 507
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +3
Query: 354 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 527
PC C G+ C++ C C + C T + VC +T+ ++C + C
Sbjct: 303 PCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAAC 357
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +1
Query: 292 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 462
T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368
Query: 463 AWCAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTT 576
+ S+ P N I Y + STT + ++ +TTT
Sbjct: 369 I-TSTLSSLPDNAICSY-LDETTTSTTFTTTMLTSTTT 404
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 370 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTK-PGNRIAKYTASDAYASTTL 546
+ + + +T T T VT++ TVPT + TST P + S + ST
Sbjct: 273 STSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTAS 332
Query: 547 ISAVVRNTT 573
S +TT
Sbjct: 333 TSTSSTSTT 341
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +1
Query: 292 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPD 462
T+ ST S +++ +T+ + A ST++ + +S++T T T S ++PT TP+
Sbjct: 309 TSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTTLSTSIPTTTTPE 368
Query: 463 AWCAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTT 576
+ S+ P N I Y + STT + ++ +TTT
Sbjct: 369 I-TSTLSSLPDNAICSY-LDETTTSTTFTTTMLTSTTT 404
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 370 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTK-PGNRIAKYTASDAYASTTL 546
+ + + +T T T VT++ TVPT + TST P + S + ST
Sbjct: 273 STSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTAS 332
Query: 547 ISAVVRNTT 573
S +TT
Sbjct: 333 TSTSSTSTT 341
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 33.9 bits (74), Expect = 0.086
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +1
Query: 292 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 471
TT +T + MK T +T T+ KST + KST T T ++ PT T
Sbjct: 261 TTPTTPTTMKSTPTTPTTPTTM--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 318
Query: 472 AQTSTKPGN-RIAKYTASDAYASTTLISAVVRNT--TTFKS 585
T T P K T + TT+ S T TT KS
Sbjct: 319 KSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS 359
Score = 31.1 bits (67), Expect = 0.61
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +1
Query: 298 FSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQ 477
++T+ MK+ +T T+ KST + KST T T ++ PT T
Sbjct: 149 WATKPTPSTMKSTPTTPTTI--KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS 206
Query: 478 TSTKPGN-RIAKYTASDAYASTTLISAVVRNT--TTFKS 585
T T P K T + TT+ S T TT KS
Sbjct: 207 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKS 245
Score = 31.1 bits (67), Expect = 0.61
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 292 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 468
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 196 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 255
Query: 469 CAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTTFKS 585
T T P + + T + + TT KS
Sbjct: 256 MKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKS 294
Score = 31.1 bits (67), Expect = 0.61
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +1
Query: 292 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 468
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 310 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTT 369
Query: 469 CAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTTFKS 585
T T P + + T + + TT KS
Sbjct: 370 MKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKS 408
Score = 28.3 bits (60), Expect = 4.3
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +1
Query: 292 TTFSTRSLMKRMKTKKSTWKTL-A*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAW 468
TT +T + MK T +T T+ + +T + KST T T ++ PT T
Sbjct: 349 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKS 408
Query: 469 CAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTT 576
T T P + T ST + ++++ T
Sbjct: 409 TPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMKSSPT 444
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 31.5 bits (68), Expect = 0.46
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +3
Query: 372 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCE 509
CS G C G+ MC C D Y S C + C+
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCK 260
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 31.1 bits (67), Expect = 0.61
Identities = 31/98 (31%), Positives = 44/98 (44%)
Frame = +1
Query: 292 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 471
TT ST S + T K T T +T + +T T TP T + T PT T ++
Sbjct: 249 TTVSTTSTVT---TTKPTTTTTTPTTTTTTPTTTTTTPTTTP--TTTTTTPTTTTTES-- 301
Query: 472 AQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTTFKS 585
T+T+ + T + A +TT S TTTFK+
Sbjct: 302 --TTTETTSTTTPTTTTTAPTTTTTAS-----TTTFKT 332
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 30.7 bits (66), Expect = 0.80
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +3
Query: 372 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDCEVYRQRC---LCL 536
C G E + HG + C K CP T+ +C + ++T QS+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 537 DNSDQC 554
+ S +C
Sbjct: 445 EESLKC 450
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 30.7 bits (66), Expect = 0.80
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +3
Query: 372 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDCEVYRQRC---LCL 536
C G E + HG + C K CP T+ +C + ++T QS+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 537 DNSDQC 554
+ S +C
Sbjct: 445 EESLKC 450
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 30.7 bits (66), Expect = 0.80
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = +1
Query: 220 NTSSTECLRA--WTRSDTMRQK*PELTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSA 393
N +S +R WT+ K P+ T F+T + T +T T +T++ S
Sbjct: 410 NVTSPPVIRPSYWTKHRVKSTKEPKTTIFTTTPVPCPTTTSTTTSATTLVPTTSS---ST 466
Query: 394 KSTNTETPC-VTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTAS 522
+T T TP VT++ T PT T + TST + T++
Sbjct: 467 TTTTTTTPVPVTSTTTEPTTTT---YTTSTSTSTTTTLPPTTST 507
Score = 27.5 bits (58), Expect = 7.5
Identities = 22/85 (25%), Positives = 36/85 (42%)
Frame = +1
Query: 295 TFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCA 474
++ T+ +K K K+T T + S T P ++S T T TP
Sbjct: 420 SYWTKHRVKSTKEPKTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVP-VT 478
Query: 475 QTSTKPGNRIAKYTASDAYASTTLI 549
T+T+P YT S + ++TT +
Sbjct: 479 STTTEPTT--TTYTTSTSTSTTTTL 501
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 29.9 bits (64), Expect = 1.4
Identities = 24/98 (24%), Positives = 37/98 (37%)
Frame = +1
Query: 283 PELTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPD 462
P TT + + T + T +T + +T+T T T + T T TP
Sbjct: 32 PTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTT---TTTPTTTTTTTPT 88
Query: 463 AWCAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTT 576
+ TST T++ +TT +A TTT
Sbjct: 89 TTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTT 126
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +3
Query: 381 GRVCEINEHGDAM-CNCIKD-CPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDNSDQC 554
G +CE + + + C + D C + CTN T+ DC + C N D+C
Sbjct: 123 GYMCECADGYEGVHCQHLVDHCAKQPCHNNATCTNMGATYHCDCTLGFDGVHCEMNIDEC 182
>AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical
protein Y18H1A.3 protein.
Length = 1258
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 364 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDA 528
+ +A VS K + ++PC SRTV R D + KP + + +A
Sbjct: 876 RQSAIISVSRKDFHAKSPCEITSRTVVGRHIWDLDTHEDVRKPATNVTNWLRKEA 930
>Z68298-1|CAA92598.2| 342|Caenorhabditis elegans Hypothetical
protein F44D12.2 protein.
Length = 342
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = +3
Query: 354 PCLKVHCSAGRV----CEINEHGDAMCNCIKDCPY 446
P ++ C G V C +N HG+ MC C D Y
Sbjct: 59 PTIQKGCVIGEVAPEGCRVNHHGNVMCFC-SDADY 92
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/60 (26%), Positives = 23/60 (38%)
Frame = +1
Query: 367 STAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTL 546
ST +T T TP + T T ++P T T P + T + STT+
Sbjct: 384 STTTSTKKLTTTTTTTPKPSQKPTTTTTKSPVVITTTTKTSPKPTTSPSTTTSTTTSTTI 443
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/71 (25%), Positives = 29/71 (40%)
Frame = +1
Query: 364 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTT 543
K+T + S+ ST+ T S T T + + + +P + T S +STT
Sbjct: 509 KTTPLETSSSSSTSQRLTTTTKSSTTSPFATRFVFSTRVTFRPVSSTVVSTKSSTTSSTT 568
Query: 544 LISAVVRNTTT 576
+ TTT
Sbjct: 569 TKPTTLSTTTT 579
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 27.1 bits (57), Expect = 9.9
Identities = 27/95 (28%), Positives = 44/95 (46%)
Frame = +1
Query: 292 TTFSTRSLMKRMKTKKSTWKTLA*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWC 471
T+ +T +L + +T ST SA T+T +T S T P +P
Sbjct: 153 TSITTSTLSPPSTVQSTTTAKPTTTSTITPTTSADPTST----ITTS-TTPNPSSPSTVQ 207
Query: 472 AQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTT 576
+ T+ +P + I T + +STT +VV++TTT
Sbjct: 208 STTTAEPTSTITSTTVPE--SSTT---SVVQSTTT 237
>AF067944-2|AAY86264.1| 97|Caenorhabditis elegans Hypothetical
protein K10C9.9 protein.
Length = 97
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 449 LVGTVLDAVTHGVSVFVDFA-DTSCAAVDFQARVFHVDFFVFILFIRDLVEKVVNS 285
++GTVL V HG S+ A +T C + + R +F+ L E +N+
Sbjct: 9 VIGTVLLGVAHGASIPTTVATETKCTSQEEAVRAVQACIMRLGIFLHQLDELHMNN 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,852,531
Number of Sequences: 27780
Number of extensions: 242598
Number of successful extensions: 970
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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