Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12k22r
(316 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 30 0.33
06_03_0038 - 15778446-15778577,15778685-15779020,15779106-157792... 29 0.58
04_04_1634 + 34937087-34937198,34937652-34937790,34938263-349383... 28 1.8
08_02_1331 + 26195949-26196132,26196606-26196710,26197270-261981... 27 2.3
02_05_1247 + 35233756-35233785,35234902-35236107 27 2.3
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 27 3.1
02_05_0591 - 30183105-30183869 27 3.1
07_03_1781 + 29468919-29468951,29469057-29469184,29469349-294694... 27 4.1
03_05_0312 - 23019662-23020093 27 4.1
03_01_0084 + 676538-676669,677828-677959,678085-678210,678820-67... 27 4.1
01_02_0048 - 10626467-10627498,10628522-10628617 27 4.1
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 26 5.4
11_03_0131 + 10497674-10499617 26 7.1
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 26 7.1
07_01_0588 + 4370771-4370983,4371069-4371167,4371268-4371399,437... 26 7.1
02_03_0109 - 15333228-15334793,15335255-15335392,15335496-153357... 26 7.1
01_07_0322 + 42719853-42720512 26 7.1
11_01_0620 - 4964263-4965052,4965578-4965663,4966332-4966413,496... 25 9.4
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 25 9.4
03_05_0121 + 21013752-21014162,21014274-21015026,21016040-21016444 25 9.4
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 25 9.4
01_06_0756 - 31731607-31731752,31732368-31732467,31732716-317329... 25 9.4
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 30.3 bits (65), Expect = 0.33
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -3
Query: 239 DDFGDSFVEPEVDPAADFLAREQNQLAGLEDE---LETSAPPP 120
++ GD EPE + ADF+ E+ + LEDE E AP P
Sbjct: 56 EEGGDDEAEPEDESDADFVGDEEEEEEDLEDEDDLEEVKAPRP 98
>06_03_0038 - 15778446-15778577,15778685-15779020,15779106-15779225,
15779280-15779765,15779861-15779994,15780111-15780230,
15784881-15785018,15785404-15786079,15786179-15786340,
15786424-15786618,15786839-15787084,15787758-15787952
Length = 979
Score = 29.5 bits (63), Expect = 0.58
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = -3
Query: 305 QRVLKIYSHSVN*FVPKAYLKMDDFGDSFVE-PEVDPAAD----FLAREQNQLAGLEDEL 141
Q+VLK S F+PK + K ++ FV+ P++ P ++ ++ R + G D+L
Sbjct: 871 QKVLKRLSDGFQSFMPKVFKKFGNYHREFVKCPKMVPCSNDCAVYVIRYMERYQGNPDKL 930
Query: 140 ETSAPPP 120
PP
Sbjct: 931 ADDFQPP 937
>04_04_1634 +
34937087-34937198,34937652-34937790,34938263-34938334,
34938414-34938546,34938591-34938730,34939478-34939585,
34939650-34939720,34940297-34940545,34940618-34940823,
34940894-34941026,34941099-34941101,34941136-34941293,
34941420-34941683,34941869-34942114
Length = 677
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -3
Query: 305 QRVLKIYSHSVN*FVPKAYLKMDDFGDSFVEPEVDPAADFLAREQNQLAGLEDE 144
Q ++++ S + N P L + DF +F+ ++ P +L R Q L+DE
Sbjct: 193 QNLVQLRSTAHNGLCPSPRLNVGDFSYNFLVGKIPPCLKYLPRSSFQGNCLQDE 246
>08_02_1331 +
26195949-26196132,26196606-26196710,26197270-26198127,
26198669-26199458,26200240-26200329,26200636-26200712,
26200797-26201383
Length = 896
Score = 27.5 bits (58), Expect = 2.3
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = -3
Query: 227 DSFVEPEVDPAAD-FLA--REQNQLA-GLEDELETSAPPPAISTSTNGFDDFVEV 75
DS + PE DPA+ F++ RE+N LA G +DE SA P +ST V+V
Sbjct: 435 DSLI-PE-DPASQSFVSPLREENALASGSDDEKNDSAVQPEVSTEAKRTTSSVKV 487
>02_05_1247 + 35233756-35233785,35234902-35236107
Length = 411
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 227 DSFVEPEVDPAADFLAREQNQLAGLEDELETSAPPPAI-STSTN 99
D FV PEV E+ + E T+A PA+ +TSTN
Sbjct: 288 DQFVRPEVVVIQVITGAEEEGAQAPQQEANTAASDPAVDATSTN 331
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 212 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDD 87
P+ DP+ + L ++ L +E PPP +T+TN DD
Sbjct: 222 PQADPSVELLVNFRHGLK-VETNGLAPPPPPPPTTTTNFHDD 262
>02_05_0591 - 30183105-30183869
Length = 254
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = -3
Query: 254 AYLKMDDFGDSFVEPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVE 78
A+ K+ D ++ V F+ E N+ E +A + S GFDD+VE
Sbjct: 52 AHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSRLGFDDYVE 110
>07_03_1781 + 29468919-29468951,29469057-29469184,29469349-29469433,
29469771-29469824,29470072-29470163,29470280-29470383,
29470811-29470886,29471231-29471678,29471874-29471916,
29471977-29472209,29472302-29472505,29472595-29472693,
29472789-29472861,29473373-29473500,29473614-29473836,
29473992-29474215,29474296-29474423,29475053-29475167,
29475603-29475658,29475795-29475888,29475966-29476152,
29476229-29476309,29476384-29476484,29476567-29476629,
29476800-29476907
Length = 1059
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -3
Query: 227 DSFVEPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDAN 48
+S VEP + D + ++DE+ APPPA STS E A F+ +
Sbjct: 923 ESLVEPSIPDPDDPIEELSIDDIDIDDEIPL-APPPASSTSHVNKKTTAEEERAKLFEGS 981
>03_05_0312 - 23019662-23020093
Length = 143
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 221 FVEPEVDPAADFLAREQNQLAGLEDELETSAPPP 120
FV+P +P D ++ + L +E ++PPP
Sbjct: 14 FVDPTHNPTTDATLQQDEHESDLPEEFGVTSPPP 47
>03_01_0084 +
676538-676669,677828-677959,678085-678210,678820-678882,
678964-679061,679133-679340,679859-679930,680016-680108,
680297-680398,680568-680665,681059-681140,681274-681362,
681960-682065,682145-682210,682527-682633,682907-683027,
683226-683411,683490-683789,683887-683967,684061-684225,
684297-684383,684476-684601,684750-684830,684917-684988,
685353-685364
Length = 934
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -3
Query: 245 KMDDFGDSFVEPEVDPAADFLAREQNQLAGLEDELETSAPPPAI 114
K+++ ++ +E +V+P A A + + LA L L PP A+
Sbjct: 653 KVENIPETNIESKVEPPAAHPASQADLLADLLGPLAIEGPPAAV 696
>01_02_0048 - 10626467-10627498,10628522-10628617
Length = 375
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 200 PAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSAS 63
P ++ L E N L + L+ +APPP+ + T G D E+ A+
Sbjct: 301 PPSENLPSEGN-LVAMAMGLDLNAPPPSPAADTIGVGDVAEMTMAA 345
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 116 ISTSTNGFDDFVEVPSASAF 57
+S+ +G+DDFV+VP+ AF
Sbjct: 384 MSSVKDGWDDFVDVPATIAF 403
>11_03_0131 + 10497674-10499617
Length = 647
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 230 GDSFVEPEVDPAADFLAREQNQ 165
GD FV+P PAA LA E+ +
Sbjct: 184 GDRFVQPSATPAAMVLAGEEGR 205
>10_01_0217 +
2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 25.8 bits (54), Expect = 7.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -3
Query: 230 GDSFVEPEVDPAADFLAREQNQLA-GLEDELETSAPPPAISTSTNGFDDFVEVPSASAFD 54
G + E V A +L R + LA GL+D+ E + P S +TNG + + +FD
Sbjct: 511 GTTHPEYRVSLAVSYLFRFLSSLANGLDDKPENANNVPNGSCTTNGTTNGSAESTVDSFD 570
>07_01_0588 +
4370771-4370983,4371069-4371167,4371268-4371399,
4372027-4372092,4372458-4372523,4372633-4372707,
4373423-4373653
Length = 293
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 125 PPAISTSTNGFDDFVEVPSASAFDANGL 42
PP + FD F +PSA+A A G+
Sbjct: 6 PPTGGAEDDFFDHFFSIPSAAAAGAGGV 33
>02_03_0109 -
15333228-15334793,15335255-15335392,15335496-15335771,
15336357-15336422,15338140-15338487
Length = 797
Score = 25.8 bits (54), Expect = 7.1
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 215 EPEVDPAADFLAREQNQLAGLEDELETSAPPPAIST-STNGFDDFVEVPSASAFDANGL 42
E + AA F E +L + ++ A A+ T S+ GFDD V + + D N +
Sbjct: 180 EDSLSEAALFAEAEAVRLLVCSEMIQPEAAAHALVTASSRGFDDVVVILLQNGVDVNSM 238
>01_07_0322 + 42719853-42720512
Length = 219
Score = 25.8 bits (54), Expect = 7.1
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = -3
Query: 197 AADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLG 21
AA+ R LA ED E ++ A T+T+G V V + FD GL+DD G
Sbjct: 129 AAELYRRPPPPLALPEDPQEGTSGGGA--TATSGRPAAVFVDEDAIFDMPGLIDDMARG 185
>11_01_0620 -
4964263-4965052,4965578-4965663,4966332-4966413,
4967052-4967156,4967600-4967772,4967988-4968101,
4973939-4974037,4974320-4974398,4975424-4975492,
4975955-4976061
Length = 567
Score = 25.4 bits (53), Expect = 9.4
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -3
Query: 230 GDSFVEPEVDPAADFL--AREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAF 57
GDS+ +V DF+ N A + ET+ PP S S + DDF+ +A +F
Sbjct: 354 GDSYKTEKVSD--DFINPTAPANIPAPSHSKTETNPPPSYDSRSESVSDDFINPTAAPSF 411
>03_06_0353 - 33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 170 NQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSAS 63
N + + E ET P + T +GF ++VEV + +
Sbjct: 2670 NNVRWVNQENETGLPYDIVVTHKSGFTEYVEVKATT 2705
>03_05_0121 + 21013752-21014162,21014274-21015026,21016040-21016444
Length = 522
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = -3
Query: 245 KMDDFGDSFVEPEVDPAADFLAREQNQLAGLEDELETSAPPPAI 114
+ DDF P+ ++ L+ + AG TSA PP +
Sbjct: 180 RYDDFSSPLSSPQQSAGSNVLSMDAADAAGAASSGYTSARPPPL 223
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 137 TSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTTS 3
TS PP ++ + + V P + + NG + P GS P TS
Sbjct: 341 TSVPPGQVNGVHDNTVEDVPAPPPTHPEVNGFDEFDPRGSVPDTS 385
>01_06_0756 -
31731607-31731752,31732368-31732467,31732716-31732943,
31733390-31733474,31733583-31733662,31733755-31733826,
31733964-31734058,31735442-31735523,31735646-31735927
Length = 389
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 203 DPAADFLAREQNQLAGLEDELETSAPP 123
DPAAD +A E +A +D+ APP
Sbjct: 5 DPAADAVAAEPLTVAETDDQPPPPAPP 31
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,457,275
Number of Sequences: 37544
Number of extensions: 158789
Number of successful extensions: 546
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 386885760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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