Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12k22r
(316 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M20470-1|AAA59506.1| 211|Homo sapiens CLTB protein. 33 0.23
M20469-1|AAA51818.1| 229|Homo sapiens CLTB protein. 33 0.23
CR536577-1|CAG38814.1| 211|Homo sapiens CLTB protein. 33 0.23
BT007028-1|AAP35675.1| 211|Homo sapiens clathrin, light polypep... 33 0.23
BC006457-1|AAH06457.1| 211|Homo sapiens clathrin, light chain (... 33 0.23
BC006332-1|AAH06332.1| 211|Homo sapiens clathrin, light chain (... 33 0.23
M20472-1|AAA59505.1| 218|Homo sapiens CLTA protein. 32 0.41
M20471-1|AAA51817.1| 248|Homo sapiens CLTA protein. 32 0.41
DQ270158-1|ABB76683.1| 236|Homo sapiens brain-specific clathrin... 32 0.41
BT007170-1|AAP35834.1| 218|Homo sapiens clathrin, light polypep... 32 0.41
BC019287-1|AAH19287.1| 218|Homo sapiens clathrin, light chain (... 32 0.41
BC009201-1|AAH09201.1| 218|Homo sapiens clathrin, light chain (... 32 0.41
AL158830-6|CAD13388.1| 248|Homo sapiens clathrin, light chain (... 32 0.41
AL158830-5|CAD13387.1| 218|Homo sapiens clathrin, light chain (... 32 0.41
U24267-1|AAC50501.1| 563|Homo sapiens pyrroline-5-carboxylate d... 31 0.54
U24266-1|AAC50500.1| 563|Homo sapiens pyrroline-5-carboxylate d... 31 0.54
BC023600-1|AAH23600.1| 563|Homo sapiens aldehyde dehydrogenase ... 31 0.54
BC007581-1|AAH07581.1| 563|Homo sapiens aldehyde dehydrogenase ... 31 0.54
AL954340-3|CAI39494.1| 214|Homo sapiens aldehyde dehydrogenase ... 31 0.54
AL954340-2|CAI39493.1| 563|Homo sapiens aldehyde dehydrogenase ... 31 0.54
AL954340-1|CAI39492.1| 153|Homo sapiens aldehyde dehydrogenase ... 31 0.54
AL080251-2|CAI23418.1| 214|Homo sapiens aldehyde dehydrogenase ... 31 0.54
AL080251-1|CAI23417.1| 563|Homo sapiens aldehyde dehydrogenase ... 31 0.54
AK222486-1|BAD96206.1| 563|Homo sapiens aldehyde dehydrogenase ... 31 0.54
BC142957-1|AAI42958.1| 514|Homo sapiens cytosolic phosphoprotei... 28 5.0
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 28 5.0
AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax... 28 5.0
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein. 28 5.0
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein. 28 5.0
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 28 5.0
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 28 5.0
AB040934-1|BAA96025.1| 735|Homo sapiens KIAA1501 protein protein. 28 5.0
AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein. 28 5.0
BC011912-1|AAH11912.1| 351|Homo sapiens dystrobrevin binding pr... 27 8.8
AY265460-1|AAP91870.1| 351|Homo sapiens Hermansky-Pudlak syndro... 27 8.8
AL022343-2|CAI21977.1| 351|Homo sapiens dystrobrevin binding pr... 27 8.8
AL022343-1|CAI21976.1| 303|Homo sapiens dystrobrevin binding pr... 27 8.8
AL021978-2|CAI42340.1| 351|Homo sapiens dystrobrevin binding pr... 27 8.8
AL021978-1|CAI42339.1| 303|Homo sapiens dystrobrevin binding pr... 27 8.8
AF394226-1|AAL46636.1| 351|Homo sapiens dysbindin protein. 27 8.8
>M20470-1|AAA59506.1| 211|Homo sapiens CLTB protein.
Length = 211
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDELETSAP-----PPAI--STSTNGFDDFVEVPSASAF-D 54
E DPAA FLA++++++AG+E++ AP PA TS G +D + F +
Sbjct: 20 EEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTVNGDVFQE 79
Query: 53 ANGLLD 36
ANG D
Sbjct: 80 ANGPAD 85
>M20469-1|AAA51818.1| 229|Homo sapiens CLTB protein.
Length = 229
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDELETSAP-----PPAI--STSTNGFDDFVEVPSASAF-D 54
E DPAA FLA++++++AG+E++ AP PA TS G +D + F +
Sbjct: 20 EEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTVNGDVFQE 79
Query: 53 ANGLLD 36
ANG D
Sbjct: 80 ANGPAD 85
>CR536577-1|CAG38814.1| 211|Homo sapiens CLTB protein.
Length = 211
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDELETSAP-----PPAI--STSTNGFDDFVEVPSASAF-D 54
E DPAA FLA++++++AG+E++ AP PA TS G +D + F +
Sbjct: 20 EEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTVNGDVFQE 79
Query: 53 ANGLLD 36
ANG D
Sbjct: 80 ANGPAD 85
>BT007028-1|AAP35675.1| 211|Homo sapiens clathrin, light
polypeptide (Lcb) protein.
Length = 211
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDELETSAP-----PPAI--STSTNGFDDFVEVPSASAF-D 54
E DPAA FLA++++++AG+E++ AP PA TS G +D + F +
Sbjct: 20 EEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTVNGDVFQE 79
Query: 53 ANGLLD 36
ANG D
Sbjct: 80 ANGPAD 85
>BC006457-1|AAH06457.1| 211|Homo sapiens clathrin, light chain
(Lcb) protein.
Length = 211
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDELETSAP-----PPAI--STSTNGFDDFVEVPSASAF-D 54
E DPAA FLA++++++AG+E++ AP PA TS G +D + F +
Sbjct: 20 EEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTVNGDVFQE 79
Query: 53 ANGLLD 36
ANG D
Sbjct: 80 ANGPAD 85
>BC006332-1|AAH06332.1| 211|Homo sapiens clathrin, light chain
(Lcb) protein.
Length = 211
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDELETSAP-----PPAI--STSTNGFDDFVEVPSASAF-D 54
E DPAA FLA++++++AG+E++ AP PA TS G +D + F +
Sbjct: 20 EEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTVNGDVFQE 79
Query: 53 ANGLLD 36
ANG D
Sbjct: 80 ANGPAD 85
>M20472-1|AAA59505.1| 218|Homo sapiens CLTA protein.
Length = 218
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDE-----LETSAPPPAISTSTNGFDDFVE 78
E DPAA FLA++++++AG+E++ L+ AP P G D V+
Sbjct: 28 EEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVD 76
>M20471-1|AAA51817.1| 248|Homo sapiens CLTA protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDE-----LETSAPPPAISTSTNGFDDFVE 78
E DPAA FLA++++++AG+E++ L+ AP P G D V+
Sbjct: 28 EEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVD 76
>DQ270158-1|ABB76683.1| 236|Homo sapiens brain-specific clathrin
light polypeptide protein.
Length = 236
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDE-----LETSAPPPAISTSTNGFDDFVE 78
E DPAA FLA++++++AG+E++ L+ AP P G D V+
Sbjct: 28 EEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVD 76
>BT007170-1|AAP35834.1| 218|Homo sapiens clathrin, light
polypeptide (Lca) protein.
Length = 218
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDE-----LETSAPPPAISTSTNGFDDFVE 78
E DPAA FLA++++++AG+E++ L+ AP P G D V+
Sbjct: 28 EEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVD 76
>BC019287-1|AAH19287.1| 218|Homo sapiens clathrin, light chain
(Lca) protein.
Length = 218
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDE-----LETSAPPPAISTSTNGFDDFVE 78
E DPAA FLA++++++AG+E++ L+ AP P G D V+
Sbjct: 28 EEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVD 76
>BC009201-1|AAH09201.1| 218|Homo sapiens clathrin, light chain
(Lca) protein.
Length = 218
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDE-----LETSAPPPAISTSTNGFDDFVE 78
E DPAA FLA++++++AG+E++ L+ AP P G D V+
Sbjct: 28 EEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVD 76
>AL158830-6|CAD13388.1| 248|Homo sapiens clathrin, light chain
(Lca) protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDE-----LETSAPPPAISTSTNGFDDFVE 78
E DPAA FLA++++++AG+E++ L+ AP P G D V+
Sbjct: 28 EEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVD 76
>AL158830-5|CAD13387.1| 218|Homo sapiens clathrin, light chain
(Lca) protein.
Length = 218
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = -3
Query: 209 EVDPAADFLAREQNQLAGLEDE-----LETSAPPPAISTSTNGFDDFVE 78
E DPAA FLA++++++AG+E++ L+ AP P G D V+
Sbjct: 28 EEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGGPDAVD 76
>U24267-1|AAC50501.1| 563|Homo sapiens pyrroline-5-carboxylate
dehydrogenase protein.
Length = 563
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -3
Query: 230 GDSFVEPEVDPAA---DFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASA 60
G + ++ E+D AA DF LE + S PP ST G + FV S
Sbjct: 152 GKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFN 211
Query: 59 FDA-NGLLDDAP 27
F A G L AP
Sbjct: 212 FTAIGGNLAGAP 223
>U24266-1|AAC50500.1| 563|Homo sapiens pyrroline-5-carboxylate
dehydrogenase protein.
Length = 563
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -3
Query: 230 GDSFVEPEVDPAA---DFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASA 60
G + ++ E+D AA DF LE + S PP ST G + FV S
Sbjct: 152 GKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFN 211
Query: 59 FDA-NGLLDDAP 27
F A G L AP
Sbjct: 212 FTAIGGNLAGAP 223
>BC023600-1|AAH23600.1| 563|Homo sapiens aldehyde dehydrogenase 4
family, member A1 protein.
Length = 563
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -3
Query: 230 GDSFVEPEVDPAA---DFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASA 60
G + ++ E+D AA DF LE + S PP ST G + FV S
Sbjct: 152 GKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFN 211
Query: 59 FDA-NGLLDDAP 27
F A G L AP
Sbjct: 212 FTAIGGNLAGAP 223
>BC007581-1|AAH07581.1| 563|Homo sapiens aldehyde dehydrogenase 4
family, member A1 protein.
Length = 563
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -3
Query: 230 GDSFVEPEVDPAA---DFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASA 60
G + ++ E+D AA DF LE + S PP ST G + FV S
Sbjct: 152 GKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFN 211
Query: 59 FDA-NGLLDDAP 27
F A G L AP
Sbjct: 212 FTAIGGNLAGAP 223
>AL954340-3|CAI39494.1| 214|Homo sapiens aldehyde dehydrogenase 4
family, member A1 protein.
Length = 214
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -3
Query: 230 GDSFVEPEVDPAA---DFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASA 60
G + ++ E+D AA DF LE + S PP ST G + FV S
Sbjct: 136 GKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFN 195
Query: 59 FDA-NGLLDDAP 27
F A G L AP
Sbjct: 196 FTAIGGNLAGAP 207
>AL954340-2|CAI39493.1| 563|Homo sapiens aldehyde dehydrogenase 4
family, member A1 protein.
Length = 563
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -3
Query: 230 GDSFVEPEVDPAA---DFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASA 60
G + ++ E+D AA DF LE + S PP ST G + FV S
Sbjct: 152 GKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFN 211
Query: 59 FDA-NGLLDDAP 27
F A G L AP
Sbjct: 212 FTAIGGNLAGAP 223
>AL954340-1|CAI39492.1| 153|Homo sapiens aldehyde dehydrogenase 4
family, member A1 protein.
Length = 153
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -3
Query: 230 GDSFVEPEVDPAA---DFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASA 60
G + ++ E+D AA DF LE + S PP ST G + FV S
Sbjct: 50 GKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFN 109
Query: 59 FDA-NGLLDDAP 27
F A G L AP
Sbjct: 110 FTAIGGNLAGAP 121
>AL080251-2|CAI23418.1| 214|Homo sapiens aldehyde dehydrogenase 4
family, member A1 protein.
Length = 214
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -3
Query: 230 GDSFVEPEVDPAA---DFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASA 60
G + ++ E+D AA DF LE + S PP ST G + FV S
Sbjct: 136 GKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFN 195
Query: 59 FDA-NGLLDDAP 27
F A G L AP
Sbjct: 196 FTAIGGNLAGAP 207
>AL080251-1|CAI23417.1| 563|Homo sapiens aldehyde dehydrogenase 4
family, member A1 protein.
Length = 563
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -3
Query: 230 GDSFVEPEVDPAA---DFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASA 60
G + ++ E+D AA DF LE + S PP ST G + FV S
Sbjct: 152 GKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFN 211
Query: 59 FDA-NGLLDDAP 27
F A G L AP
Sbjct: 212 FTAIGGNLAGAP 223
>AK222486-1|BAD96206.1| 563|Homo sapiens aldehyde dehydrogenase 4A1
precursor variant protein.
Length = 563
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Frame = -3
Query: 230 GDSFVEPEVDPAA---DFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASA 60
G + ++ E+D AA DF LE + S PP ST G + FV S
Sbjct: 152 GKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFN 211
Query: 59 FDA-NGLLDDAP 27
F A G L AP
Sbjct: 212 FTAIGGNLAGAP 223
>BC142957-1|AAI42958.1| 514|Homo sapiens cytosolic phosphoprotein
DP58 protein.
Length = 514
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 185 LAREQNQLAGLEDELETSAPPPAISTSTNG 96
L QN++A L++EL+ P +S TNG
Sbjct: 254 LLMHQNRVASLQEELQDITPEEELSYKTNG 283
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -3
Query: 194 ADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGST 15
A A+ Q Q G TS+P PA+STST+ PS++ A ST
Sbjct: 245 AQVQAQVQAQAVGASTPT-TSSPAPAVSTSTSS-----STPSSTTSTTTTATSVAQTVST 298
Query: 14 PTT 6
PTT
Sbjct: 299 PTT 301
>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
protein 2 protein.
Length = 2677
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 188 FLAREQNQLAGLEDELET-SAPPPAISTSTNGFDDFVEVP 72
F ++ +++AGL LET SA P++ + G ++VP
Sbjct: 1599 FSSKSTSRIAGLSKSLETSSALSPSLKNKSKGIQSILKVP 1638
>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 188 FLAREQNQLAGLEDELET-SAPPPAISTSTNGFDDFVEVP 72
F ++ +++AGL LET SA P++ + G ++VP
Sbjct: 1599 FSSKSTSRIAGLSKSLETSSALSPSLKNKSKGIQSILKVP 1638
>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 188 FLAREQNQLAGLEDELET-SAPPPAISTSTNGFDDFVEVP 72
F ++ +++AGL LET SA P++ + G ++VP
Sbjct: 1599 FSSKSTSRIAGLSKSLETSSALSPSLKNKSKGIQSILKVP 1638
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -3
Query: 194 ADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGST 15
A A+ Q Q G TS+P PA+STST+ PS++ A ST
Sbjct: 245 AQVQAQVQAQAVGASTPT-TSSPAPAVSTSTSS-----STPSSTTSTTTTATSVAQTVST 298
Query: 14 PTT 6
PTT
Sbjct: 299 PTT 301
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = -3
Query: 194 ADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGST 15
A A+ Q Q G TS+P PA+STST+ PS++ A ST
Sbjct: 249 AQVQAQVQAQAVGASTPT-TSSPAPAVSTSTSS-----STPSSTTSTTTTATSVAQTVST 302
Query: 14 PTT 6
PTT
Sbjct: 303 PTT 305
>AB040934-1|BAA96025.1| 735|Homo sapiens KIAA1501 protein protein.
Length = 735
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = -3
Query: 233 FGDSFVEPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFD 54
FGD EPE + L R+ LA ED L A P I T+ D ++
Sbjct: 104 FGDESPEPEASGRGERLGRKVAPLATTEDSL---ASIPFIDEPTSPSIDLQAKHVPASAV 160
Query: 53 ANGLLDDAP-LGSTPTT 6
+ ++ AP LG++P++
Sbjct: 161 VSSAMNSAPVLGTSPSS 177
>AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.
Length = 2663
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 188 FLAREQNQLAGLEDELET-SAPPPAISTSTNGFDDFVEVP 72
F ++ +++AGL LET SA P++ + G ++VP
Sbjct: 1585 FSSKSTSRIAGLSKSLETSSALSPSLKNKSKGIQSILKVP 1624
>BC011912-1|AAH11912.1| 351|Homo sapiens dystrobrevin binding
protein 1 protein.
Length = 351
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 235 ILETVSLNLRSIQQQISLPVSRIS*QVSKTS*KPVLRPLPF-RRLQTGLTILSKY 74
+LET+ L S+QQ + + +S + + K R +PF + GL +LS+Y
Sbjct: 1 MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRY 55
>AY265460-1|AAP91870.1| 351|Homo sapiens Hermansky-Pudlak syndrome
type 7 protein protein.
Length = 351
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 235 ILETVSLNLRSIQQQISLPVSRIS*QVSKTS*KPVLRPLPF-RRLQTGLTILSKY 74
+LET+ L S+QQ + + +S + + K R +PF + GL +LS+Y
Sbjct: 1 MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRY 55
>AL022343-2|CAI21977.1| 351|Homo sapiens dystrobrevin binding
protein 1 protein.
Length = 351
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 235 ILETVSLNLRSIQQQISLPVSRIS*QVSKTS*KPVLRPLPF-RRLQTGLTILSKY 74
+LET+ L S+QQ + + +S + + K R +PF + GL +LS+Y
Sbjct: 1 MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRY 55
>AL022343-1|CAI21976.1| 303|Homo sapiens dystrobrevin binding
protein 1 protein.
Length = 303
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 235 ILETVSLNLRSIQQQISLPVSRIS*QVSKTS*KPVLRPLPF-RRLQTGLTILSKY 74
+LET+ L S+QQ + + +S + + K R +PF + GL +LS+Y
Sbjct: 1 MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRY 55
>AL021978-2|CAI42340.1| 351|Homo sapiens dystrobrevin binding
protein 1 protein.
Length = 351
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 235 ILETVSLNLRSIQQQISLPVSRIS*QVSKTS*KPVLRPLPF-RRLQTGLTILSKY 74
+LET+ L S+QQ + + +S + + K R +PF + GL +LS+Y
Sbjct: 1 MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRY 55
>AL021978-1|CAI42339.1| 303|Homo sapiens dystrobrevin binding
protein 1 protein.
Length = 303
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 235 ILETVSLNLRSIQQQISLPVSRIS*QVSKTS*KPVLRPLPF-RRLQTGLTILSKY 74
+LET+ L S+QQ + + +S + + K R +PF + GL +LS+Y
Sbjct: 1 MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRY 55
>AF394226-1|AAL46636.1| 351|Homo sapiens dysbindin protein.
Length = 351
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 235 ILETVSLNLRSIQQQISLPVSRIS*QVSKTS*KPVLRPLPF-RRLQTGLTILSKY 74
+LET+ L S+QQ + + +S + + K R +PF + GL +LS+Y
Sbjct: 1 MLETLRERLLSVQQDFTSGLKTLSDKSREAKVKSKPRTVPFLPKYSAGLELLSRY 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,736,055
Number of Sequences: 237096
Number of extensions: 818062
Number of successful extensions: 2252
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2249
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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