Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12k22r
(316 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY121633-1|AAM51960.1| 219|Drosophila melanogaster GM02293p pro... 48 3e-06
AF055900-1|AAC14276.1| 228|Drosophila melanogaster clathrin lig... 48 3e-06
AE014296-3305|AAF49047.1| 219|Drosophila melanogaster CG6948-PA... 48 3e-06
AE014296-2489|AAF49656.2| 1190|Drosophila melanogaster CG7003-PA... 30 0.54
AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-P... 29 0.95
BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p pro... 28 2.9
AY121714-1|AAM52041.1| 987|Drosophila melanogaster SD05215p pro... 28 2.9
AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-P... 28 2.9
AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-P... 28 2.9
AE013599-2397|AAS64824.1| 987|Drosophila melanogaster CG15609-P... 28 2.9
AE013599-2396|AAS64823.1| 987|Drosophila melanogaster CG15609-P... 28 2.9
AE013599-2395|AAF57918.2| 987|Drosophila melanogaster CG15609-P... 28 2.9
BT030123-1|ABN49262.1| 1211|Drosophila melanogaster IP13783p pro... 27 5.0
BT011534-1|AAS15670.1| 117|Drosophila melanogaster LP22717p pro... 27 5.0
AE014298-2092|AAF48416.1| 117|Drosophila melanogaster CG5548-PA... 27 5.0
AE014296-1508|AAF50376.2| 1211|Drosophila melanogaster CG6511-PA... 27 5.0
U26716-5|AAA98548.1| 340|Drosophila melanogaster sodium channel... 27 6.7
U26716-4|AAA98545.1| 335|Drosophila melanogaster sodium channel... 27 6.7
U26716-3|AAA98547.1| 348|Drosophila melanogaster sodium channel... 27 6.7
U26716-2|AAA98544.1| 348|Drosophila melanogaster sodium channel... 27 6.7
U26716-1|AAA98546.1| 348|Drosophila melanogaster sodium channel... 27 6.7
M32078-6|AAB59190.1| 2110|Drosophila melanogaster sodium channel... 27 6.7
M32078-5|AAB59191.1| 2123|Drosophila melanogaster sodium channel... 27 6.7
M32078-4|AAB59192.1| 2077|Drosophila melanogaster sodium channel... 27 6.7
M32078-3|AAB59193.1| 2118|Drosophila melanogaster sodium channel... 27 6.7
M32078-2|AAB59194.1| 2121|Drosophila melanogaster sodium channel... 27 6.7
M32078-1|AAB59195.1| 2131|Drosophila melanogaster sodium channel... 27 6.7
AE014298-2416|ABI30986.1| 2131|Drosophila melanogaster CG9907-PC... 27 6.7
AE014298-2415|ABI30985.1| 2131|Drosophila melanogaster CG9907-PB... 27 6.7
AE014298-2414|AAF48617.2| 2131|Drosophila melanogaster CG9907-PA... 27 6.7
AF324426-1|AAG48328.1| 2531|Drosophila melanogaster transcriptio... 26 8.8
AE014296-3230|AAF49103.2| 2531|Drosophila melanogaster CG8491-PA... 26 8.8
>AY121633-1|AAM51960.1| 219|Drosophila melanogaster GM02293p
protein.
Length = 219
Score = 48.0 bits (109), Expect = 3e-06
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Frame = -3
Query: 236 DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAIST 108
DFGD F E VDPAA+FLAREQ+ L LE E+ +++ PPA ST
Sbjct: 2 DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAAST 47
>AF055900-1|AAC14276.1| 228|Drosophila melanogaster clathrin light
chain protein.
Length = 228
Score = 48.0 bits (109), Expect = 3e-06
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Frame = -3
Query: 236 DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAIST 108
DFGD F E VDPAA+FLAREQ+ L LE E+ +++ PPA ST
Sbjct: 2 DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAAST 47
>AE014296-3305|AAF49047.1| 219|Drosophila melanogaster CG6948-PA
protein.
Length = 219
Score = 48.0 bits (109), Expect = 3e-06
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Frame = -3
Query: 236 DFGDSFVEPE-VDPAADFLAREQNQLAGLEDELE--TSAPPPAIST 108
DFGD F E VDPAA+FLAREQ+ L LE E+ +++ PPA ST
Sbjct: 2 DFGDDFAAKEDVDPAAEFLAREQSALGDLEAEITGGSASAPPAAST 47
>AE014296-2489|AAF49656.2| 1190|Drosophila melanogaster CG7003-PA
protein.
Length = 1190
Score = 30.3 bits (65), Expect = 0.54
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 191 LLLDRPQVQRNCLQNHPFSNKLLEQIN*QNESRFSTLFDEKI 316
LL P +RN Q H F NK ++Q++ +SR + LF+EK+
Sbjct: 651 LLAPMPDFERNLAQIHLFGNKQIKQMD-HPDSR-AILFEEKL 690
>AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-PA
protein.
Length = 2768
Score = 29.5 bits (63), Expect = 0.95
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 185 LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDA 30
++ E ++ ED+L +S AI++ST G D ++SA G D+A
Sbjct: 835 ISEESTEVPVAEDDLSSSTSASAIASSTEGVQDAASETTSSAPARAGDKDEA 886
>BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p
protein.
Length = 1240
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 185 LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSAS 63
LA E ED++ + P P T +FVEVP A+
Sbjct: 20 LANENISTEEFEDQIINAVPEPVKVTKPKAQAEFVEVPKAT 60
>AY121714-1|AAM52041.1| 987|Drosophila melanogaster SD05215p
protein.
Length = 987
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = -3
Query: 215 EPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
+ ++ ++ N +A L+D LE S T+ F+DF + NG +D
Sbjct: 166 DEDMQSVVSMMSVNNNDVAPLDD-LEDIPDLDGFSEITDNFNDFTQQLEHMTTSLNGCID 224
Query: 35 DAPLGSTPTTS 3
A S P+ S
Sbjct: 225 VATPQSVPSLS 235
>AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-PB,
isoform B protein.
Length = 1431
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 185 LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSAS 63
LA E ED++ + P P T +FVEVP A+
Sbjct: 20 LANENISTEEFEDQIINAVPEPVKVTKPKAQAEFVEVPKAT 60
>AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-PA,
isoform A protein.
Length = 1431
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 185 LAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSAS 63
LA E ED++ + P P T +FVEVP A+
Sbjct: 20 LANENISTEEFEDQIINAVPEPVKVTKPKAQAEFVEVPKAT 60
>AE013599-2397|AAS64824.1| 987|Drosophila melanogaster CG15609-PC,
isoform C protein.
Length = 987
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = -3
Query: 215 EPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
+ ++ ++ N +A L+D LE S T+ F+DF + NG +D
Sbjct: 166 DEDMQSVVSMMSVNNNDVAPLDD-LEDIPDLDGFSEITDNFNDFTQQLEHMTTSLNGCID 224
Query: 35 DAPLGSTPTTS 3
A S P+ S
Sbjct: 225 VATPQSVPSLS 235
>AE013599-2396|AAS64823.1| 987|Drosophila melanogaster CG15609-PB,
isoform B protein.
Length = 987
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = -3
Query: 215 EPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
+ ++ ++ N +A L+D LE S T+ F+DF + NG +D
Sbjct: 166 DEDMQSVVSMMSVNNNDVAPLDD-LEDIPDLDGFSEITDNFNDFTQQLEHMTTSLNGCID 224
Query: 35 DAPLGSTPTTS 3
A S P+ S
Sbjct: 225 VATPQSVPSLS 235
>AE013599-2395|AAF57918.2| 987|Drosophila melanogaster CG15609-PA,
isoform A protein.
Length = 987
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = -3
Query: 215 EPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
+ ++ ++ N +A L+D LE S T+ F+DF + NG +D
Sbjct: 166 DEDMQSVVSMMSVNNNDVAPLDD-LEDIPDLDGFSEITDNFNDFTQQLEHMTTSLNGCID 224
Query: 35 DAPLGSTPTTS 3
A S P+ S
Sbjct: 225 VATPQSVPSLS 235
>BT030123-1|ABN49262.1| 1211|Drosophila melanogaster IP13783p
protein.
Length = 1211
Score = 27.1 bits (57), Expect = 5.0
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 209 EVDPAADFLARE-QNQLAGLEDELETSAP 126
E+DP+ DF+ E +L G E+EL + AP
Sbjct: 753 ELDPSMDFIGDELAQELEGEEEELPSLAP 781
>BT011534-1|AAS15670.1| 117|Drosophila melanogaster LP22717p
protein.
Length = 117
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -3
Query: 251 YLKMDDFGDSFVEPEVDPAADFLAREQNQLAGLEDELETSAPP 123
Y+K D V P DP F +R++ + ++E+E++ P
Sbjct: 8 YMKPDVMPGPDVVPTFDPLLGFKSRKERVMIATQEEMESAKLP 50
>AE014298-2092|AAF48416.1| 117|Drosophila melanogaster CG5548-PA
protein.
Length = 117
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -3
Query: 251 YLKMDDFGDSFVEPEVDPAADFLAREQNQLAGLEDELETSAPP 123
Y+K D V P DP F +R++ + ++E+E++ P
Sbjct: 8 YMKPDVMPGPDVVPTFDPLLGFKSRKERVMIATQEEMESAKLP 50
>AE014296-1508|AAF50376.2| 1211|Drosophila melanogaster CG6511-PA
protein.
Length = 1211
Score = 27.1 bits (57), Expect = 5.0
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 209 EVDPAADFLARE-QNQLAGLEDELETSAP 126
E+DP+ DF+ E +L G E+EL + AP
Sbjct: 753 ELDPSMDFIGDELAQELEGEEEELPSLAP 781
>U26716-5|AAA98548.1| 340|Drosophila melanogaster sodium channel
protein protein.
Length = 340
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 29 CCWVWLKFQEWVSLIV 44
>U26716-4|AAA98545.1| 335|Drosophila melanogaster sodium channel
protein protein.
Length = 335
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 37 CCWVWLKFQEWVSLIV 52
>U26716-3|AAA98547.1| 348|Drosophila melanogaster sodium channel
protein protein.
Length = 348
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 37 CCWVWLKFQEWVSLIV 52
>U26716-2|AAA98544.1| 348|Drosophila melanogaster sodium channel
protein protein.
Length = 348
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 37 CCWVWLKFQEWVSLIV 52
>U26716-1|AAA98546.1| 348|Drosophila melanogaster sodium channel
protein protein.
Length = 348
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 37 CCWVWLKFQEWVSLIV 52
>M32078-6|AAB59190.1| 2110|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2110
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 779 CCWVWLKFQEWVSLIV 794
>M32078-5|AAB59191.1| 2123|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2123
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 792 CCWVWLKFQEWVSLIV 807
>M32078-4|AAB59192.1| 2077|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2077
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 800 CCWVWLKFQEWVSLIV 815
>M32078-3|AAB59193.1| 2118|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2118
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 800 CCWVWLKFQEWVSLIV 815
>M32078-2|AAB59194.1| 2121|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2121
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 800 CCWVWLKFQEWVSLIV 815
>M32078-1|AAB59195.1| 2131|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2131
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 800 CCWVWLKFQEWVSLIV 815
>AE014298-2416|ABI30986.1| 2131|Drosophila melanogaster CG9907-PC,
isoform C protein.
Length = 2131
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 800 CCWVWLKFQEWVSLIV 815
>AE014298-2415|ABI30985.1| 2131|Drosophila melanogaster CG9907-PB,
isoform B protein.
Length = 2131
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 800 CCWVWLKFQEWVSLIV 815
>AE014298-2414|AAF48617.2| 2131|Drosophila melanogaster CG9907-PA,
isoform A protein.
Length = 2131
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 192 CCWIDLRFNETVSKII 239
CCW+ L+F E VS I+
Sbjct: 800 CCWVWLKFQEWVSLIV 815
>AF324426-1|AAG48328.1| 2531|Drosophila melanogaster transcriptional
coactivator kohtaloprotein.
Length = 2531
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -3
Query: 140 ETSAPPPAIS-TSTNGFDD 87
+TS PPPA T+T+GFDD
Sbjct: 746 KTSPPPPAPPPTTTHGFDD 764
>AE014296-3230|AAF49103.2| 2531|Drosophila melanogaster CG8491-PA
protein.
Length = 2531
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -3
Query: 140 ETSAPPPAIS-TSTNGFDD 87
+TS PPPA T+T+GFDD
Sbjct: 746 KTSPPPPAPPPTTTHGFDD 764
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,434,387
Number of Sequences: 53049
Number of extensions: 279143
Number of successful extensions: 1155
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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