Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12k22r
(316 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 37 0.004
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 37 0.004
U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light ... 32 0.100
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 0.30
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 0.30
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 29 0.93
U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical pr... 28 1.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 1.2
U23178-2|AAK68302.1| 460|Caenorhabditis elegans Hypothetical pr... 28 1.6
U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical p... 27 2.1
L10986-7|AAA28014.2| 362|Caenorhabditis elegans Hypothetical pr... 27 2.1
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 27 2.8
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 27 2.8
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 27 2.8
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 2.8
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 2.8
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 27 2.8
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 27 2.8
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 27 2.8
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 2.8
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 2.8
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 2.8
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 27 3.8
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 27 3.8
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 27 3.8
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 27 3.8
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 27 3.8
AF125447-1|AAD12807.1| 414|Caenorhabditis elegans Hypothetical ... 26 5.0
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 26 5.0
Z81530-6|CAB04310.1| 329|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 25 8.7
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 25 8.7
Z19152-9|CAC35809.1| 364|Caenorhabditis elegans Hypothetical pr... 25 8.7
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 25 8.7
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 25 8.7
AL032647-7|CAA21691.2| 360|Caenorhabditis elegans Hypothetical ... 25 8.7
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.004
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 176 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAP 27
EQNQ GL++ L P + + NG D E PS+ F+ L+ D P
Sbjct: 399 EQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.004
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 176 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAP 27
EQNQ GL++ L P + + NG D E PS+ F+ L+ D P
Sbjct: 399 EQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light
chain protein 1 protein.
Length = 226
Score = 31.9 bits (69), Expect = 0.100
Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 17/74 (22%)
Frame = -3
Query: 203 DPAADFLAREQNQLAGLE-----------DELETSAPPPAISTSTNGF----DDFVEV-- 75
DP ADFLAREQN A + D E AP PA+ D+ V
Sbjct: 3 DPVADFLAREQNLFADFDGAPPAAAAANPDAPEADAPAPALDDDFGDLQIAGDEPPPVVH 62
Query: 74 PSASAFDANGLLDD 33
P+ S D +GL+DD
Sbjct: 63 PTDSGVDLDGLVDD 76
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 30.3 bits (65), Expect = 0.30
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 212 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDD 87
P V P + + +N AGL D LE + PA +N FDD
Sbjct: 330 PPVAPRRNPVVSPKNSTAGLLDGLELGSAEPAKKAPSNIFDD 371
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 30.3 bits (65), Expect = 0.30
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 212 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDD 87
P V P + + +N AGL D LE + PA +N FDD
Sbjct: 330 PPVAPRRNPVVSPKNSTAGLLDGLELGSAEPAKKAPSNIFDD 371
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 28.7 bits (61), Expect = 0.93
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 179 REQNQLAGLEDELE-TSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTT 6
R + G DE + APPP S+ G+D+ PSA A D AP G PT+
Sbjct: 80 RARRPARGAYDEGDYKEAPPPTSYPSSGGYDE----PSAPAHDT---APQAPAGPAPTS 131
>U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical
protein C01G8.9b protein.
Length = 661
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -3
Query: 176 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDA 30
++ A L DE S PP + +NGFD S S+ NG L DA
Sbjct: 606 QKRSAAALIDEQSRSPPPAKRAHLSNGFD-----KSKSSVSTNGTLGDA 649
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 1.2
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -3
Query: 176 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDA 30
++ A L DE S PP + +NGFD S S+ NG L DA
Sbjct: 1669 QKRSAAALIDEQSRSPPPAKRAHLSNGFD-----KSKSSVSTNGTLGDA 1712
>U23178-2|AAK68302.1| 460|Caenorhabditis elegans Hypothetical
protein F08B1.3 protein.
Length = 460
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 25 NGASSNRPLASNADALGTSTKSSNPFVDV 111
NG+ +NR ++ + D GT T SS+P + +
Sbjct: 415 NGSRTNRSVSCSPDECGTLTDSSDPHLTI 443
>U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical
protein F37A4.9 protein.
Length = 418
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 203 DPAADFLAREQNQLAGLE--DELETSAPPPAISTSTNGFDDFVEVPSASAFDA 51
D DF + +++ L DELE++ PP AI + F + + PS ++ D+
Sbjct: 358 DVLLDFFSNHKHECMKLTAWDELESAKPPLAIKILRDAFSN-TDSPSTTSMDS 409
>L10986-7|AAA28014.2| 362|Caenorhabditis elegans Hypothetical
protein F10E9.3 protein.
Length = 362
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 22 PNGASSNRPLASNADALGTSTKSSNPFVDVE 114
P A S P + ++ + GTST SSN +DV+
Sbjct: 242 PPSAVSPAPGSGSSASSGTSTSSSNGIIDVQ 272
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 155 LEDELETSAPPPAISTSTNGFDDFVEV--PSASAFDANGLLDDAPLGSTPTTS 3
L D LET PPPA + GFD+ ++ P + P+ S P+TS
Sbjct: 269 LRDVLETETPPPA-KRKSMGFDESSQMIDPDGELSFFKQNENRTPVTSVPSTS 320
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 179 REQNQLAGLEDELETSAP--PPAISTSTNGFDDFVEVPSASAFDANGLLDD 33
++ Q+ G+E E + PP + +D + P + FD +G +DD
Sbjct: 36 QQNQQIQGIEQTGEPNGDNQPPQLVIDQLSYDQQQQQPKQNCFDTHGNMDD 86
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = -3
Query: 212 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 392 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 450
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = -3
Query: 212 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 606 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 664
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = -3
Query: 212 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 742 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 800
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = -3
Query: 212 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 791 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 849
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = -3
Query: 212 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 791 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 849
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = -3
Query: 212 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 791 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 849
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = -3
Query: 212 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 783 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 841
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = -3
Query: 212 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 794 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 852
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = -3
Query: 212 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 36
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 795 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 853
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 3.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 125 PPAISTSTNGFDDFVEVPSASAFD 54
PP+ S+STNG DF+ + + +F+
Sbjct: 283 PPSSSSSTNGGSDFLPIITPQSFN 306
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -3
Query: 176 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTP 12
E +Q + E++APP ++ F P +D++G DAP S P
Sbjct: 613 ENSQYQVDQHPAESAAPPRPVAPMEPLFKQAPPQPDPFGWDSSGHTGDAPTASEP 667
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 152 EDELETSAP-PPAISTSTNGFDDFVEVPSASA 60
+DE + SA PP +S N DD +VPS SA
Sbjct: 1768 DDETQDSAEAPPVLSAEVNS-DDSNDVPSTSA 1798
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 152 EDELETSAP-PPAISTSTNGFDDFVEVPSASA 60
+DE + SA PP +S N DD +VPS SA
Sbjct: 1768 DDETQDSAEAPPVLSAEVNS-DDSNDVPSTSA 1798
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 26.6 bits (56), Expect = 3.8
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -3
Query: 218 VEPEVDPAADF-LAREQNQLAGLEDELETSAP---PPAISTSTNGFDDFVEVPSASAFDA 51
V PE P A +A+ + LE AP P + T T DD + + A ++
Sbjct: 277 VTPEPIPEAPVPIAQYIQEPTTTPAPLEAPAPVENAPNLPTPTFSVDDLMAQAARDALNS 336
Query: 50 NGLLDDAPLGSTP 12
N ++ DAP P
Sbjct: 337 NSIVPDAPKVEEP 349
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 26.6 bits (56), Expect = 3.8
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -3
Query: 218 VEPEVDPAADF-LAREQNQLAGLEDELETSAP---PPAISTSTNGFDDFVEVPSASAFDA 51
V PE P A +A+ + LE AP P + T T DD + + A ++
Sbjct: 277 VTPEPIPEAPVPIAQYIQEPTTTPAPLEAPAPVENAPNLPTPTFSVDDLMAQAARDALNS 336
Query: 50 NGLLDDAPLGSTP 12
N ++ DAP P
Sbjct: 337 NSIVPDAPKVEEP 349
>AF125447-1|AAD12807.1| 414|Caenorhabditis elegans Hypothetical
protein Y14H12B.2 protein.
Length = 414
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = -3
Query: 137 TSAPPPAI--STSTNGFDDFVEV 75
TSAPPPA +TS F DFV+V
Sbjct: 274 TSAPPPAAPETTSLRDFLDFVKV 296
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 236 DFGDSFVEPEVDPAADFLAREQNQLAGLEDELETS 132
+FG+ EP+VDP++ E +A + L+TS
Sbjct: 1928 EFGEIVYEPKVDPSSKMTEAEVCFIATSQKNLDTS 1962
>Z81530-6|CAB04310.1| 329|Caenorhabditis elegans Hypothetical
protein F36D1.8 protein.
Length = 329
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 182 QGNLLLDRPQVQRNCLQNHPFSNKLLEQIN*QNESRFSTLFD 307
Q N L D +R CL+ F N E +N + RF+ + D
Sbjct: 111 QHNSLNDTWTTERKCLEEDQFLNPTFELLNDPDLVRFAFIRD 152
>Z81089-1|CAB03135.2| 957|Caenorhabditis elegans Hypothetical
protein F53H4.1 protein.
Length = 957
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 113 STSTNGFDDFVEVPSASAFDANGLLDD 33
S+S + DDF+E + + GLLDD
Sbjct: 119 SSSRSSSDDFIESDDNEDYKSAGLLDD 145
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 25.4 bits (53), Expect = 8.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 296 LKIYSHSVN*FVPKAYLKMD 237
++IY H +N +PKAYL ++
Sbjct: 1967 IEIYCHRMNSTIPKAYLNVN 1986
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 25.4 bits (53), Expect = 8.7
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 296 LKIYSHSVN*FVPKAYLKMD 237
++IY H +N +PKAYL ++
Sbjct: 1967 IEIYCHRMNSTIPKAYLNVN 1986
>Z19152-9|CAC35809.1| 364|Caenorhabditis elegans Hypothetical
protein B0464.9 protein.
Length = 364
Score = 25.4 bits (53), Expect = 8.7
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 239 DDFGDSFVEPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFD-DFVEVPSAS 63
DD D+ + + + + QN L L + PPP STST+G + E+P +
Sbjct: 3 DDKLDTLPDLQSETSHVTTPHRQNDL--LRQAVTHGRPPPVPSTSTSGKKREMSELPWSD 60
Query: 62 AFD 54
FD
Sbjct: 61 FFD 63
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 25.4 bits (53), Expect = 8.7
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -3
Query: 224 SFVEPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVE--VPSASAFDA 51
S++ P V A + + D LE S+ PA+ST+ DD + +PS
Sbjct: 269 SYLAPAVPARAPPPVPQSPLRVNVRDSLEGSSSTPALSTTRPTIDDLLGEIIPSTPP--- 325
Query: 50 NGLLDDAPLGSTPTTS 3
+ A LGS+ +TS
Sbjct: 326 -PVAPRAVLGSSSSTS 340
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 25.4 bits (53), Expect = 8.7
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -3
Query: 224 SFVEPEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVE--VPSASAFDA 51
S++ P V A + + D LE S+ PA+ST+ DD + +PS
Sbjct: 449 SYLAPAVPARAPPPVPQSPLRVNVRDSLEGSSSTPALSTTRPTIDDLLGEIIPSTPP--- 505
Query: 50 NGLLDDAPLGSTPTTS 3
+ A LGS+ +TS
Sbjct: 506 -PVAPRAVLGSSSSTS 520
>AL032647-7|CAA21691.2| 360|Caenorhabditis elegans Hypothetical
protein Y57A10B.4 protein.
Length = 360
Score = 25.4 bits (53), Expect = 8.7
Identities = 5/15 (33%), Positives = 12/15 (80%)
Frame = -1
Query: 67 HQHLMLTVCWMMLHW 23
H+++++ +CW +L W
Sbjct: 61 HENMVILLCWFLLQW 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,363,728
Number of Sequences: 27780
Number of extensions: 141030
Number of successful extensions: 587
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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