Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12k22f
         (376 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       29   0.057
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    27   0.17 
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    27   0.30 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   0.93 
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   2.8  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   3.7  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   3.7  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   5.0  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    22   8.7  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    22   8.7  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    22   8.7  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   8.7  

>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 29.1 bits (62), Expect = 0.057
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +3

Query: 234 VEVPSASAFDANGLLDDAPLGSTPTTVFKQEREEPEKIKI 353
           +E  +  A DA+  LDDA +  TP ++ + + E+PEK+ +
Sbjct: 191 MEAMNEVAADAD--LDDAKMKKTPDSIDRVDHEQPEKMSL 228


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
 Frame = +1

Query: 178 KPVLRPLPFRRLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNK---NVRNLR 342
           +PV+      +L  GLT++    V +   L++T  W+ L W+ +  ++++     VR+LR
Sbjct: 23  RPVVNESDPLQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNVRWNSSEYGGVRDLR 82


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +1

Query: 178 KPVLRPLPFRRLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNK---NVRNLR 342
           +PV+      +L  GLT++    V +   L++T  W+ L W+ +  +++      VR+LR
Sbjct: 55  RPVVNESDPLQLSFGLTLMQIIDVDEKNQLLVTNIWLKLEWNDMNLRWNTSEYGGVRDLR 114


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 125 CCWIDLRFNETVSKII 78
           CCW+ L+F E V+ I+
Sbjct: 790 CCWVWLKFQEWVAFIV 805


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 337 GSSRSCLNTVVGVDPNGASSNRPLASNAD 251
           G SRS ++  +  +  G S+ RP  + AD
Sbjct: 33  GRSRSFVDNAIRSEATGKSTGRPRKTTAD 61


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 208 RLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNKNV 330
           +LQ  L+ L     HQ  H+ +T     + W+ L ++Y N  V
Sbjct: 162 KLQYLLSALKGDAAHQFEHMQITADNYYVTWEALLKRYDNSKV 204


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 364 SSRHILIFSGSSRSCLNTVVGVDPNG 287
           S + + I SG+  S + TV+  DPNG
Sbjct: 514 SRKRLRISSGNVSSEIPTVIQNDPNG 539


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +1

Query: 178 KPVLRPLPFRRLQTGLTILSKYPVHQ--HLMLTVCWMMLHWDPLQQQYSNK---NVRNLR 342
           +PV        ++ GLT+     V +   L++T  W+ L W+    ++++     VR+LR
Sbjct: 40  RPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLRWNDSEYGGVRDLR 99


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 289 HWDPLQQQYSNKNVRNLRR 345
           H DPL + Y N+    LR+
Sbjct: 103 HPDPLDELYENRTAECLRK 121


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 225 DDFVEVPSASAFDAN 269
           DDF+++  AS  DAN
Sbjct: 57  DDFIKILEASRVDAN 71


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 84  FGDSFVEPEVDPAADFLAREQNQLAGLEDELETSAP 191
           F DSFV+P V P      RE+  +   E+ +    P
Sbjct: 150 FPDSFVDPSVFPK----LREEGAIVQAENRMTIDIP 181


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
 Frame = +3

Query: 270 GLLDDAPL---GSTPTTVFKQEREEPEKIKIWREEQK 371
           G  DD  L   G+TPTT      E    +K W  E +
Sbjct: 732 GYADDLVLLVPGTTPTTAAAAAEEAVAAVKQWLLEHR 768


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 394,997
Number of Sequences: 2352
Number of extensions: 7992
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)