Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12k22f
(376 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 37 0.005
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 37 0.005
U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light ... 32 0.15
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 0.47
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 0.47
Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical pr... 29 0.82
Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical pr... 29 1.4
U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical pr... 28 1.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 1.9
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 2.5
U23178-2|AAK68302.1| 460|Caenorhabditis elegans Hypothetical pr... 28 2.5
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 2.5
U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical p... 27 3.3
L10986-7|AAA28014.2| 362|Caenorhabditis elegans Hypothetical pr... 27 3.3
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 27 3.3
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 27 4.4
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 27 4.4
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 4.4
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 4.4
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 27 4.4
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 27 4.4
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 27 4.4
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 4.4
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 4.4
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 4.4
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 27 5.8
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 27 5.8
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 27 5.8
AF125447-1|AAD12807.1| 414|Caenorhabditis elegans Hypothetical ... 26 7.6
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 26 7.6
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 26 7.6
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.005
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 141 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAP 290
EQNQ GL++ L P + + NG D E PS+ F+ L+ D P
Sbjct: 399 EQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.005
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 141 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAP 290
EQNQ GL++ L P + + NG D E PS+ F+ L+ D P
Sbjct: 399 EQNQCVGLDNGLHAIGCSPRVLSCQNGHVDIFECPSSLVFNDQSLICDYP 448
>U53151-1|AAB37069.1| 226|Caenorhabditis elegans Clathrin light
chain protein 1 protein.
Length = 226
Score = 31.9 bits (69), Expect = 0.15
Identities = 27/74 (36%), Positives = 33/74 (44%), Gaps = 17/74 (22%)
Frame = +3
Query: 114 DPAADFLAREQNQLAGLE-----------DELETSAPPPAISTSTNGF----DDFVEV-- 242
DP ADFLAREQN A + D E AP PA+ D+ V
Sbjct: 3 DPVADFLAREQNLFADFDGAPPAAAAANPDAPEADAPAPALDDDFGDLQIAGDEPPPVVH 62
Query: 243 PSASAFDANGLLDD 284
P+ S D +GL+DD
Sbjct: 63 PTDSGVDLDGLVDD 76
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 30.3 bits (65), Expect = 0.47
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 105 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDD 230
P V P + + +N AGL D LE + PA +N FDD
Sbjct: 330 PPVAPRRNPVVSPKNSTAGLLDGLELGSAEPAKKAPSNIFDD 371
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 30.3 bits (65), Expect = 0.47
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 105 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDD 230
P V P + + +N AGL D LE + PA +N FDD
Sbjct: 330 PPVAPRRNPVVSPKNSTAGLLDGLELGSAEPAKKAPSNIFDD 371
>Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical
protein T02E9.3 protein.
Length = 763
Score = 29.5 bits (63), Expect = 0.82
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +1
Query: 202 FRRLQTGLTILSKYPVHQHLMLTVCWM-MLH--WDPLQQQYSNKNVRNLRRSKYGEKNKK 372
FR + G I P+H L + W+ H ++PL NKN RN R + N+
Sbjct: 697 FRGVLMGFQININTPIHLTLFVYTSWLGYAHSCFNPLIYMCLNKNFRNTMRKMMQKTNRA 756
Query: 373 K 375
K
Sbjct: 757 K 757
>Z70271-3|CAA94234.1| 358|Caenorhabditis elegans Hypothetical
protein W08D2.6 protein.
Length = 358
Score = 28.7 bits (61), Expect = 1.4
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 138 REQNQLAGLEDELE-TSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTT 311
R + G DE + APPP S+ G+D+ PSA A D AP G PT+
Sbjct: 80 RARRPARGAYDEGDYKEAPPPTSYPSSGGYDE----PSAPAHDT---APQAPAGPAPTS 131
>U80439-9|AAO38675.1| 661|Caenorhabditis elegans Hypothetical
protein C01G8.9b protein.
Length = 661
Score = 28.3 bits (60), Expect = 1.9
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 141 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDA 287
++ A L DE S PP + +NGFD S S+ NG L DA
Sbjct: 606 QKRSAAALIDEQSRSPPPAKRAHLSNGFD-----KSKSSVSTNGTLGDA 649
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 1.9
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 141 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDA 287
++ A L DE S PP + +NGFD S S+ NG L DA
Sbjct: 1669 QKRSAAALIDEQSRSPPPAKRAHLSNGFD-----KSKSSVSTNGTLGDA 1712
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 2.5
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 165 EDELETSAP-PPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTTVFKQ-EREEP 338
+DE + SA PP +S N DD +VPS SA A + + + P + Q +EP
Sbjct: 1768 DDETQDSAEAPPVLSAEVNS-DDSNDVPSTSA--AAAVSSETAADAEPASAEDQAPTDEP 1824
Query: 339 EKIK 350
E ++
Sbjct: 1825 EPME 1828
>U23178-2|AAK68302.1| 460|Caenorhabditis elegans Hypothetical
protein F08B1.3 protein.
Length = 460
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 292 NGASSNRPLASNADALGTSTKSSNPFVDV 206
NG+ +NR ++ + D GT T SS+P + +
Sbjct: 415 NGSRTNRSVSCSPDECGTLTDSSDPHLTI 443
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 2.5
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 165 EDELETSAP-PPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTPTTVFKQ-EREEP 338
+DE + SA PP +S N DD +VPS SA A + + + P + Q +EP
Sbjct: 1768 DDETQDSAEAPPVLSAEVNS-DDSNDVPSTSA--AAAVSSETAADAEPASAEDQAPTDEP 1824
Query: 339 EKIK 350
E ++
Sbjct: 1825 EPME 1828
>U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical
protein F37A4.9 protein.
Length = 418
Score = 27.5 bits (58), Expect = 3.3
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 114 DPAADFLAREQNQLAGLE--DELETSAPPPAISTSTNGFDDFVEVPSASAFDA 266
D DF + +++ L DELE++ PP AI + F + + PS ++ D+
Sbjct: 358 DVLLDFFSNHKHECMKLTAWDELESAKPPLAIKILRDAFSN-TDSPSTTSMDS 409
>L10986-7|AAA28014.2| 362|Caenorhabditis elegans Hypothetical
protein F10E9.3 protein.
Length = 362
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 295 PNGASSNRPLASNADALGTSTKSSNPFVDVE 203
P A S P + ++ + GTST SSN +DV+
Sbjct: 242 PPSAVSPAPGSGSSASSGTSTSSSNGIIDVQ 272
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 374 FFLFFSPYFDLLRFLTFL 321
FF FF YFDL R +TF+
Sbjct: 111 FFNFFDDYFDLTRGVTFI 128
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 138 REQNQLAGLEDELETSAP--PPAISTSTNGFDDFVEVPSASAFDANGLLDD 284
++ Q+ G+E E + PP + +D + P + FD +G +DD
Sbjct: 36 QQNQQIQGIEQTGEPNGDNQPPQLVIDQLSYDQQQQQPKQNCFDTHGNMDD 86
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 105 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 281
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 392 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 450
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 105 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 281
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 606 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 664
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 105 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 281
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 742 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 800
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 105 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 281
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 791 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 849
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 105 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 281
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 791 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 849
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 105 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 281
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 791 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 849
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 105 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 281
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 783 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 841
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 105 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 281
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 794 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 852
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = +3
Query: 105 PEVDPAADFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLD 281
P P + + + +T++ P ++T FDDFVE + + +LD
Sbjct: 795 PTSSPTTTRMRSPSTHKSTVSQATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILD 853
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 5.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 192 PPAISTSTNGFDDFVEVPSASAFD 263
PP+ S+STNG DF+ + + +F+
Sbjct: 283 PPSSSSSTNGGSDFLPIITPQSFN 306
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 26.6 bits (56), Expect = 5.8
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +3
Query: 141 EQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTP 305
E +Q + E++APP ++ F P +D++G DAP S P
Sbjct: 613 ENSQYQVDQHPAESAAPPRPVAPMEPLFKQAPPQPDPFGWDSSGHTGDAPTASEP 667
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 26.6 bits (56), Expect = 5.8
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +3
Query: 99 VEPEVDPAADF-LAREQNQLAGLEDELETSAP---PPAISTSTNGFDDFVEVPSASAFDA 266
V PE P A +A+ + LE AP P + T T DD + + A ++
Sbjct: 277 VTPEPIPEAPVPIAQYIQEPTTTPAPLEAPAPVENAPNLPTPTFSVDDLMAQAARDALNS 336
Query: 267 NGLLDDAPLGSTP 305
N ++ DAP P
Sbjct: 337 NSIVPDAPKVEEP 349
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 26.6 bits (56), Expect = 5.8
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = +3
Query: 99 VEPEVDPAADF-LAREQNQLAGLEDELETSAP---PPAISTSTNGFDDFVEVPSASAFDA 266
V PE P A +A+ + LE AP P + T T DD + + A ++
Sbjct: 277 VTPEPIPEAPVPIAQYIQEPTTTPAPLEAPAPVENAPNLPTPTFSVDDLMAQAARDALNS 336
Query: 267 NGLLDDAPLGSTP 305
N ++ DAP P
Sbjct: 337 NSIVPDAPKVEEP 349
>AF125447-1|AAD12807.1| 414|Caenorhabditis elegans Hypothetical
protein Y14H12B.2 protein.
Length = 414
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +3
Query: 180 TSAPPPAI--STSTNGFDDFVEV 242
TSAPPPA +TS F DFV+V
Sbjct: 274 TSAPPPAAPETTSLRDFLDFVKV 296
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 81 DFGDSFVEPEVDPAADFLAREQNQLAGLEDELETS 185
+FG+ EP+VDP++ E +A + L+TS
Sbjct: 1928 EFGEIVYEPKVDPSSKMTEAEVCFIATSQKNLDTS 1962
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 26.2 bits (55), Expect = 7.6
Identities = 15/68 (22%), Positives = 26/68 (38%)
Frame = +3
Query: 126 DFLAREQNQLAGLEDELETSAPPPAISTSTNGFDDFVEVPSASAFDANGLLDDAPLGSTP 305
+ LA + +L E++ PPA +G +P+ +DDA L P
Sbjct: 3065 EVLAEHERRLREAEEQQRRQNAPPAPVVEMDGAAVIASLPANERAQVLAEMDDAELAGLP 3124
Query: 306 TTVFKQER 329
+ + R
Sbjct: 3125 ADMQNEAR 3132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,882,932
Number of Sequences: 27780
Number of extensions: 184431
Number of successful extensions: 824
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -