Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12k20f
         (633 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060441-1|AAL25480.1|  143|Drosophila melanogaster LD47312p pro...    29   4.0  
AM765982-1|CAO78883.1|  186|Drosophila melanogaster hypothetical...    29   4.0  
AE014296-2798|AAN11740.1|  143|Drosophila melanogaster CG9705-PB...    29   4.0  
AE014296-2797|AAF49414.1|  143|Drosophila melanogaster CG9705-PA...    29   4.0  
AM765973-1|CAO78874.1|  186|Drosophila melanogaster hypothetical...    29   5.2  
AM765971-1|CAO78872.1|  186|Drosophila melanogaster hypothetical...    29   5.2  
AM765969-1|CAO78870.1|  186|Drosophila melanogaster hypothetical...    29   5.2  
AM765967-1|CAO78868.1|  186|Drosophila melanogaster hypothetical...    29   5.2  
AM765966-1|CAO78867.1|  186|Drosophila melanogaster hypothetical...    29   5.2  
AE014134-373|AAN10419.1|  194|Drosophila melanogaster CG31686-PA...    29   5.2  
AY069772-1|AAL39917.1|  582|Drosophila melanogaster SD01508p pro...    28   9.1  
AM765979-1|CAO78880.1|  186|Drosophila melanogaster hypothetical...    28   9.1  
AE014298-2832|AAF48947.1|  582|Drosophila melanogaster CG8034-PA...    28   9.1  

>AY060441-1|AAL25480.1|  143|Drosophila melanogaster LD47312p
           protein.
          Length = 143

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 534 HYTAFSPLLSVAIPTPYLRVRTSYKSTSLRSL 439
           H+ + SP  S+ +P+P +  RT   STS R+L
Sbjct: 19  HHNSHSPNASLQLPSPIITRRTRTASTSARAL 50


>AM765982-1|CAO78883.1|  186|Drosophila melanogaster hypothetical
           protein protein.
          Length = 186

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 452 AFAVSSKFVKLSAIFSTLVGFRLSNLLLNPSVHSR-CIITDATFTP 318
           AFA +   +  S I    VGFRLSN+L   SV S+  + T+AT  P
Sbjct: 16  AFAAARPKIN-SQISQNQVGFRLSNVLTKESVSSKSSMSTEATSEP 60


>AE014296-2798|AAN11740.1|  143|Drosophila melanogaster CG9705-PB,
           isoform B protein.
          Length = 143

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 534 HYTAFSPLLSVAIPTPYLRVRTSYKSTSLRSL 439
           H+ + SP  S+ +P+P +  RT   STS R+L
Sbjct: 19  HHNSHSPNASLQLPSPIITRRTRTASTSARAL 50


>AE014296-2797|AAF49414.1|  143|Drosophila melanogaster CG9705-PA,
           isoform A protein.
          Length = 143

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 534 HYTAFSPLLSVAIPTPYLRVRTSYKSTSLRSL 439
           H+ + SP  S+ +P+P +  RT   STS R+L
Sbjct: 19  HHNSHSPNASLQLPSPIITRRTRTASTSARAL 50


>AM765973-1|CAO78874.1|  186|Drosophila melanogaster hypothetical
           protein protein.
          Length = 186

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 452 AFAVSSKFVKLSAIFSTLVGFRLSNLLLNPSVHSR-CIITDATFTP 318
           AFA +   +  S I    VGFRLSN+L   SV S+  + T+AT  P
Sbjct: 16  AFAAARPKIN-SQISQNQVGFRLSNVLTKESVASKSSMSTEATSEP 60


>AM765971-1|CAO78872.1|  186|Drosophila melanogaster hypothetical
           protein protein.
          Length = 186

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 452 AFAVSSKFVKLSAIFSTLVGFRLSNLLLNPSVHSR-CIITDATFTP 318
           AFA +   +  S I    VGFRLSN+L   SV S+  + T+AT  P
Sbjct: 16  AFAAARPKIN-SQISQNQVGFRLSNVLTKESVASKSSMSTEATSEP 60


>AM765969-1|CAO78870.1|  186|Drosophila melanogaster hypothetical
           protein protein.
          Length = 186

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 452 AFAVSSKFVKLSAIFSTLVGFRLSNLLLNPSVHSR-CIITDATFTP 318
           AFA +   +  S I    VGFRLSN+L   SV S+  + T+AT  P
Sbjct: 16  AFAAARPKIN-SQISQNQVGFRLSNVLTKESVASKSSMSTEATSEP 60


>AM765967-1|CAO78868.1|  186|Drosophila melanogaster hypothetical
           protein protein.
          Length = 186

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 452 AFAVSSKFVKLSAIFSTLVGFRLSNLLLNPSVHSR-CIITDATFTP 318
           AFA +   +  S I    VGFRLSN+L   SV S+  + T+AT  P
Sbjct: 16  AFAAARPKIN-SQISQNQVGFRLSNVLTKESVASKSSMSTEATSEP 60


>AM765966-1|CAO78867.1|  186|Drosophila melanogaster hypothetical
           protein protein.
          Length = 186

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 452 AFAVSSKFVKLSAIFSTLVGFRLSNLLLNPSVHSR-CIITDATFTP 318
           AFA +   +  S I    VGFRLSN+L   SV S+  + T+AT  P
Sbjct: 16  AFAAARPKIN-SQISQNQVGFRLSNVLTKESVASKSSMSTEATSEP 60


>AE014134-373|AAN10419.1|  194|Drosophila melanogaster CG31686-PA
           protein.
          Length = 194

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 452 AFAVSSKFVKLSAIFSTLVGFRLSNLLLNPSVHSR-CIITDATFTP 318
           AFA +   +  S I    VGFRLSN+L   SV S+  + T+AT  P
Sbjct: 16  AFAAARPKIN-SQISQNQVGFRLSNVLTKESVASKSSMSTEATSEP 60


>AY069772-1|AAL39917.1|  582|Drosophila melanogaster SD01508p
           protein.
          Length = 582

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 364 GFRSKFERRKPTKVLKIAESFTNLDETAK 450
           G R  F + KPT++ K AE+   LDE AK
Sbjct: 315 GHRDSFIKMKPTELDKQAEAAAALDEEAK 343


>AM765979-1|CAO78880.1|  186|Drosophila melanogaster hypothetical
           protein protein.
          Length = 186

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 419 SAIFSTLVGFRLSNLLLNPSVHSR-CIITDATFTP 318
           S I    VGFRLSN+L   SV S+  + T+AT  P
Sbjct: 26  SQISQNQVGFRLSNVLTKESVASKSSMSTEATSEP 60


>AE014298-2832|AAF48947.1|  582|Drosophila melanogaster CG8034-PA
           protein.
          Length = 582

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 364 GFRSKFERRKPTKVLKIAESFTNLDETAK 450
           G R  F + KPT++ K AE+   LDE AK
Sbjct: 315 GHRDSFIKMKPTELDKQAEAAAALDEEAK 343


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,248,876
Number of Sequences: 53049
Number of extensions: 456653
Number of successful extensions: 821
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)